BLASTX nr result

ID: Coptis21_contig00012236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012236
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||S16323 hypothetical protein - Arabidopsis thaliana gi|16328...    56   3e-06
ref|NP_001118549.1| uncharacterized protein [Arabidopsis thalian...    56   4e-06
ref|XP_004159093.1| PREDICTED: uncharacterized protein LOC101231...    55   6e-06

>pir||S16323 hypothetical protein - Arabidopsis thaliana
           gi|16328|emb|CAA41623.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 29

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +3

Query: 150 VMGFCIWPLETPMRLLWSTSFFRHKILVF 236
           +MGFCI PLE+P RLLWSTSFFRHKI++F
Sbjct: 1   MMGFCICPLESPARLLWSTSFFRHKIMIF 29


>ref|NP_001118549.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332640150|gb|AEE73671.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 28

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = +3

Query: 153 MGFCIWPLETPMRLLWSTSFFRHKILVF 236
           MGFCI PLE+P RLLWSTSFFRHKI++F
Sbjct: 1   MGFCICPLESPARLLWSTSFFRHKIMIF 28


>ref|XP_004159093.1| PREDICTED: uncharacterized protein LOC101231309 [Cucumis sativus]
          Length = 307

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +3

Query: 150 VMGFCIWPLETPMRLLWSTSFFRHKILVF 236
           VMGFCI PL TP RLLWSTSFFRHK+++F
Sbjct: 279 VMGFCISPLGTPARLLWSTSFFRHKLMIF 307


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