BLASTX nr result

ID: Coptis21_contig00012232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012232
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514918.1| protein with unknown function [Ricinus commu...   123   5e-26
ref|NP_564896.1| DNA-binding HORMA-like protein [Arabidopsis tha...   115   1e-23
gb|AAN37925.1|AF410429_1 aysnaptic 1 [Brassica oleracea var. alb...   115   2e-23
emb|CBI27652.3| unnamed protein product [Vitis vinifera]              114   3e-23
ref|XP_002271582.1| PREDICTED: uncharacterized protein LOC100267...   114   3e-23

>ref|XP_002514918.1| protein with unknown function [Ricinus communis]
           gi|223545969|gb|EEF47472.1| protein with unknown
           function [Ricinus communis]
          Length = 613

 Score =  123 bits (309), Expect = 5e-26
 Identities = 97/253 (38%), Positives = 117/253 (46%), Gaps = 5/253 (1%)
 Frame = -3

Query: 770 VNHSSGNQDIVAAVGKERSSEXXXXXXXXXXXXXXDT-QQLASVTNWITSRHIDIVELTA 594
           V+ S  NQ +VA V KER  E              +  QQLA V  WITS H+D V L  
Sbjct: 268 VSQSQENQYMVAPVEKERREEDNGMVDQDDTEDPEEDEQQLARVKGWITSHHLDTVGLND 327

Query: 593 VLSNFPDISMTLT*M*MEKVYITKEEDT*CXXXXXXXXXXXXXXXLFILTFFAELMGKLV 414
           VLSNFPDIS+ LT                                        E+M KLV
Sbjct: 328 VLSNFPDISVVLT---------------------------------------EEIMDKLV 348

Query: 413 DEGVLSRAGRDMYTIATKRFISFHGIIMCSNRVFTLKTCDPRL*YPLKGFE*HLNDVKK* 234
            EGV+S++G D YT   ++   F          FT+                    VK+ 
Sbjct: 349 KEGVISKSGPDTYTKNNQQKSDFE---------FTV--------------------VKEE 379

Query: 233 MDAEETLDDTTRKRTDEDYMYMKALYHDLPMDYVTV----TKLDGEASQTIV*KLIDKMA 66
           MD +   +     R D D+MYMKALYH LPM+YVTV    TKLDGEA+QT V KLIDKM 
Sbjct: 380 MDGQAIPNGNKAPRID-DHMYMKALYHALPMNYVTVAKLQTKLDGEANQTTVRKLIDKMT 438

Query: 65  QDGYLEGVNNRQL 27
           +DGYLE   NR+L
Sbjct: 439 RDGYLEAKGNRRL 451


>ref|NP_564896.1| DNA-binding HORMA-like protein [Arabidopsis thaliana]
           gi|332196517|gb|AEE34638.1| DNA-binding HORMA-like
           protein [Arabidopsis thaliana]
          Length = 596

 Score =  115 bits (289), Expect = 1e-23
 Identities = 86/252 (34%), Positives = 117/252 (46%), Gaps = 4/252 (1%)
 Frame = -3

Query: 770 VNHSSGNQDIVAAVGKERSSEXXXXXXXXXXXXXXDTQQLASVTNWITSRHIDIVELTAV 591
           ++ +  NQ IVA V K+   +              + QQLA V +WI SRH+D +ELT +
Sbjct: 266 ISQTQENQFIVAPVEKQDDDDGEVDEDDNTQDPAENEQQLARVKDWINSRHLDTLELTDI 325

Query: 590 LSNFPDISMTLT*M*MEKVYITKEEDT*CXXXXXXXXXXXXXXXLFILTFFAELMGKLVD 411
           L+NFPDIS+ L+                                        E+M +LV 
Sbjct: 326 LANFPDISIVLS---------------------------------------EEIMDQLVT 346

Query: 410 EGVLSRAGRDMYTIATKRFISFHGIIMCSNRVFTLKTCDPRL*YPLKGFE*HLNDVKK*M 231
           EGVLS+ G+DMY                      +K  D       K  E     VK+  
Sbjct: 347 EGVLSKTGKDMY----------------------IKKRD-------KTPESEFTFVKEEA 377

Query: 230 DAEETLDDTTRKRTDEDYMYMKALYHDLPMDYVTVTK----LDGEASQTIV*KLIDKMAQ 63
           D + +   +      EDY+YMKALYH LPM YVT+TK    LDGEA+QT V KL+D+M Q
Sbjct: 378 DGQISPGKSV---APEDYLYMKALYHSLPMKYVTITKLHNMLDGEANQTAVRKLMDRMTQ 434

Query: 62  DGYLEGVNNRQL 27
           +GY+E  +NR+L
Sbjct: 435 EGYVEASSNRRL 446


>gb|AAN37925.1|AF410429_1 aysnaptic 1 [Brassica oleracea var. alboglabra]
          Length = 599

 Score =  115 bits (287), Expect = 2e-23
 Identities = 90/252 (35%), Positives = 116/252 (46%), Gaps = 4/252 (1%)
 Frame = -3

Query: 770 VNHSSGNQDIVAAVGKERSSEXXXXXXXXXXXXXXDTQQLASVTNWITSRHIDIVELTAV 591
           ++ +   Q +VAAV K+   +                QQL  V +WI SRH+D +ELT V
Sbjct: 266 ISQTKETQFLVAAVEKQEDDDGEVDEDNTQDPVESQ-QQLERVKDWINSRHLDTLELTDV 324

Query: 590 LSNFPDISMTLT*M*MEKVYITKEEDT*CXXXXXXXXXXXXXXXLFILTFFAELMGKLVD 411
           L+NFPDIS+ LT                                        E+M +L  
Sbjct: 325 LANFPDISIALT---------------------------------------EEIMDQLEK 345

Query: 410 EGVLSRAGRDMYTIATKRFISFHGIIMCSNRVFTLKTCDPRL*YPLKGFE*HLNDVKK*M 231
           EGVLS+ G++ YTI               NR  T          P + F    N VK   
Sbjct: 346 EGVLSKTGKETYTI---------------NREKT----------PWREF----NFVKDEA 376

Query: 230 DAEETLDDTTRKRTDEDYMYMKALYHDLPMDYVTVTK----LDGEASQTIV*KLIDKMAQ 63
           D +    D  +    EDYMYMKALYH LPM YVT+TK    LDGEA+QT V KLID+M Q
Sbjct: 377 DGKTASKDE-KSIAPEDYMYMKALYHSLPMQYVTITKLHNMLDGEANQTKVRKLIDRMVQ 435

Query: 62  DGYLEGVNNRQL 27
           +GY+E  +NR+L
Sbjct: 436 EGYVEDSSNRRL 447


>emb|CBI27652.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  114 bits (285), Expect = 3e-23
 Identities = 89/254 (35%), Positives = 120/254 (47%), Gaps = 6/254 (2%)
 Frame = -3

Query: 770 VNHSSGNQDIVAAVGKERSSEXXXXXXXXXXXXXXDT-QQLASVTNWITSRHIDIVELTA 594
           VN S  +Q IVA V K++  E              +  QQL+ V +WI+  H+D +ELT 
Sbjct: 178 VNLSQRDQYIVAPVDKQKPPEDTGMVDEDDTQDSVEDEQQLSRVKDWISCCHLDTIELTD 237

Query: 593 VLSNFPDISMTLT*M*MEKVYITKEEDT*CXXXXXXXXXXXXXXXLFILTFFAELMGKLV 414
           VLSNFPDIS+ LT                                        E+M KLV
Sbjct: 238 VLSNFPDISVVLT---------------------------------------EEIMDKLV 258

Query: 413 DEGVLSRAGRDMYTIATKRFISFHGIIMCSNRVFTLKTCDPRL*YPLKGFE*HLNDVKK* 234
            EGVLS+ G+D YTI  +                  K C           E   + VK+ 
Sbjct: 259 KEGVLSKTGKDAYTIKRQ------------------KEC-----------EYEFDAVKEE 289

Query: 233 MDAEET-LDDTTRKRTDEDYMYMKALYHDLPMDYVTVTK----LDGEASQTIV*KLIDKM 69
           M A+   ++D   +   ED+MYMKALY+ LPM+YVTV K    L G+A+QT V KLID+M
Sbjct: 290 MGAQALPINDKVDQAMGEDHMYMKALYYALPMNYVTVPKLQNMLQGQANQTTVRKLIDRM 349

Query: 68  AQDGYLEGVNNRQL 27
            QDG+++  +NR+L
Sbjct: 350 TQDGFIDAKSNRRL 363


>ref|XP_002271582.1| PREDICTED: uncharacterized protein LOC100267642 [Vitis vinifera]
          Length = 662

 Score =  114 bits (285), Expect = 3e-23
 Identities = 89/254 (35%), Positives = 120/254 (47%), Gaps = 6/254 (2%)
 Frame = -3

Query: 770 VNHSSGNQDIVAAVGKERSSEXXXXXXXXXXXXXXDT-QQLASVTNWITSRHIDIVELTA 594
           VN S  +Q IVA V K++  E              +  QQL+ V +WI+  H+D +ELT 
Sbjct: 313 VNLSQRDQYIVAPVDKQKPPEDTGMVDEDDTQDSVEDEQQLSRVKDWISCCHLDTIELTD 372

Query: 593 VLSNFPDISMTLT*M*MEKVYITKEEDT*CXXXXXXXXXXXXXXXLFILTFFAELMGKLV 414
           VLSNFPDIS+ LT                                        E+M KLV
Sbjct: 373 VLSNFPDISVVLT---------------------------------------EEIMDKLV 393

Query: 413 DEGVLSRAGRDMYTIATKRFISFHGIIMCSNRVFTLKTCDPRL*YPLKGFE*HLNDVKK* 234
            EGVLS+ G+D YTI  +                  K C           E   + VK+ 
Sbjct: 394 KEGVLSKTGKDAYTIKRQ------------------KEC-----------EYEFDAVKEE 424

Query: 233 MDAEET-LDDTTRKRTDEDYMYMKALYHDLPMDYVTVTK----LDGEASQTIV*KLIDKM 69
           M A+   ++D   +   ED+MYMKALY+ LPM+YVTV K    L G+A+QT V KLID+M
Sbjct: 425 MGAQALPINDKVDQAMGEDHMYMKALYYALPMNYVTVPKLQNMLQGQANQTTVRKLIDRM 484

Query: 68  AQDGYLEGVNNRQL 27
            QDG+++  +NR+L
Sbjct: 485 TQDGFIDAKSNRRL 498


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