BLASTX nr result

ID: Coptis21_contig00012202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012202
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328937.1| predicted protein [Populus trichocarpa] gi|1...    91   1e-16
ref|XP_002300114.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|NP_001044809.1| Os01g0849500 [Oryza sativa Japonica Group] g...    82   3e-14
ref|XP_002271031.1| PREDICTED: uncharacterized protein LOC100256...    82   6e-14
ref|NP_198912.1| uncharacterized protein [Arabidopsis thaliana] ...    81   8e-14

>ref|XP_002328937.1| predicted protein [Populus trichocarpa] gi|118483654|gb|ABK93721.1|
           unknown [Populus trichocarpa]
           gi|222839367|gb|EEE77704.1| predicted protein [Populus
           trichocarpa]
          Length = 68

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/55 (74%), Positives = 48/55 (87%)
 Frame = -3

Query: 167 MNDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVHAVIYGLIL 3
           MNDWAA +IA ALF FL+PGL+FQMPGK RP+DF+NMKTSL +I VH VIYGL+L
Sbjct: 1   MNDWAASLIAAALFAFLSPGLVFQMPGKERPLDFMNMKTSLAAIFVHLVIYGLLL 55


>ref|XP_002300114.1| predicted protein [Populus trichocarpa] gi|222847372|gb|EEE84919.1|
           predicted protein [Populus trichocarpa]
          Length = 68

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/55 (72%), Positives = 48/55 (87%)
 Frame = -3

Query: 167 MNDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVHAVIYGLIL 3
           M DWAAP+IA ALF FL+PGL+FQMPGK RP+DF+NMKTSL ++ VH VIYGL+L
Sbjct: 1   MKDWAAPLIAAALFAFLSPGLVFQMPGKERPLDFMNMKTSLAAMFVHLVIYGLLL 55


>ref|NP_001044809.1| Os01g0849500 [Oryza sativa Japonica Group]
           gi|113534340|dbj|BAF06723.1| Os01g0849500 [Oryza sativa
           Japonica Group] gi|125572638|gb|EAZ14153.1| hypothetical
           protein OsJ_04083 [Oryza sativa Japonica Group]
           gi|215766895|dbj|BAG99123.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218189379|gb|EEC71806.1| hypothetical protein
           OsI_04440 [Oryza sativa Indica Group]
          Length = 68

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = -3

Query: 167 MNDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVHAVIYGLIL 3
           M DWA  IIA ALF  L PG + QMPG++RPVDF+NMKTSL SI+VHAVIYGL+L
Sbjct: 1   MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLL 55


>ref|XP_002271031.1| PREDICTED: uncharacterized protein LOC100256574 [Vitis vinifera]
           gi|296082330|emb|CBI21335.3| unnamed protein product
           [Vitis vinifera]
          Length = 68

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 35/55 (63%), Positives = 46/55 (83%)
 Frame = -3

Query: 167 MNDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVHAVIYGLIL 3
           M DWAA +IA ALF FL+PGL+FQ+PG+ RP DF+ MKT++ ++ VHAVIYGL+L
Sbjct: 1   MRDWAALLIASALFAFLSPGLIFQIPGRERPADFMGMKTNIAAVFVHAVIYGLLL 55


>ref|NP_198912.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9759142|dbj|BAB09698.1| unnamed protein product
           [Arabidopsis thaliana] gi|21554020|gb|AAM63101.1|
           unknown [Arabidopsis thaliana]
           gi|88010816|gb|ABD38857.1| At5g40960 [Arabidopsis
           thaliana] gi|332007236|gb|AED94619.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 68

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 36/55 (65%), Positives = 44/55 (80%)
 Frame = -3

Query: 167 MNDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVHAVIYGLIL 3
           M+DWAAP+IA ALF FL+PGL+ Q PGK  PV F+NMKT++ SI VH V+YGL L
Sbjct: 1   MHDWAAPLIASALFAFLSPGLILQFPGKESPVGFMNMKTTVASIFVHTVLYGLFL 55


Top