BLASTX nr result

ID: Coptis21_contig00012182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012182
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ78599.1| cellulose synthase-like protein [Populus tomentosa]     63   2e-08
gb|AFZ78596.1| cellulose synthase-like protein [Populus tomentosa]     63   2e-08
ref|XP_002303664.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_003631403.1| PREDICTED: cellulose synthase-like protein G...    63   3e-08
emb|CBI34529.3| unnamed protein product [Vitis vinifera]               63   3e-08

>gb|AFZ78599.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 694

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +2

Query: 143 VLLESAKVNDITGHRMPNLVYISREKNKTSPHHFKAGA 256
           VLL+++K  DI G+ MPNL+Y+SREKNK SPHHFKAGA
Sbjct: 208 VLLDASKDKDIAGYSMPNLIYVSREKNKASPHHFKAGA 245


>gb|AFZ78596.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 739

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +2

Query: 143 VLLESAKVNDITGHRMPNLVYISREKNKTSPHHFKAGA 256
           VLL+++K  DI G+ MPNL+Y+SREKNK SPHHFKAGA
Sbjct: 253 VLLDASKDKDIAGYSMPNLIYVSREKNKASPHHFKAGA 290


>ref|XP_002303664.1| predicted protein [Populus trichocarpa] gi|222841096|gb|EEE78643.1|
           predicted protein [Populus trichocarpa]
          Length = 739

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +2

Query: 143 VLLESAKVNDITGHRMPNLVYISREKNKTSPHHFKAGA 256
           VLL+++K  DI G+ MPNL+Y+SREKNK SPHHFKAGA
Sbjct: 253 VLLDASKDKDIAGYSMPNLIYVSREKNKASPHHFKAGA 290


>ref|XP_003631403.1| PREDICTED: cellulose synthase-like protein G3-like [Vitis vinifera]
          Length = 527

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/38 (78%), Positives = 30/38 (78%)
 Frame = +2

Query: 143 VLLESAKVNDITGHRMPNLVYISREKNKTSPHHFKAGA 256
           VLLE  K  DITGH MPNLVYISREK   SPHHFKAGA
Sbjct: 54  VLLERGKDKDITGHDMPNLVYISREKRMDSPHHFKAGA 91


>emb|CBI34529.3| unnamed protein product [Vitis vinifera]
          Length = 1323

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/38 (78%), Positives = 30/38 (78%)
 Frame = +2

Query: 143  VLLESAKVNDITGHRMPNLVYISREKNKTSPHHFKAGA 256
            VLLE  K  DITGH MPNLVYISREK   SPHHFKAGA
Sbjct: 968  VLLERGKDKDITGHDMPNLVYISREKRMDSPHHFKAGA 1005



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/38 (71%), Positives = 29/38 (76%)
 Frame = +2

Query: 143 VLLESAKVNDITGHRMPNLVYISREKNKTSPHHFKAGA 256
           VLLE+ +  DITG  MPNLVY SREKN   PHHFKAGA
Sbjct: 243 VLLEADRDKDITGLTMPNLVYASREKNMNLPHHFKAGA 280


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