BLASTX nr result

ID: Coptis21_contig00012165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012165
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002522208.1| hypothetical protein RCOM_1732210 [Ricinus c...    73   2e-11
gb|EEC81198.1| hypothetical protein OsI_24213 [Oryza sativa Indi...    71   8e-11
ref|XP_002317250.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002869889.1| At4g21420 [Arabidopsis lyrata subsp. lyrata]...    70   2e-10

>ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|222847954|gb|EEE85501.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/79 (43%), Positives = 47/79 (59%)
 Frame = +3

Query: 78  WLPPTAPTTKINTDGASRGNPGNAGVGATYRNCNGDFLLVFHRHIGVTSSYWAECLAIVE 257
           W  P    TK+N DG+ +G  G A +G  +RN   +FLL +   IG T+S  AE  A+  
Sbjct: 35  WKKPQIGWTKLNFDGSCKGTAGKASIGGVFRNHEAEFLLGYAEPIGGTTSTIAELAALRR 94

Query: 258 GLEVAIEKGWLDVWIESDS 314
           GLE+ +E GW +VW+E DS
Sbjct: 95  GLELVLENGWSNVWLEGDS 113


>ref|XP_002522208.1| hypothetical protein RCOM_1732210 [Ricinus communis]
           gi|223538579|gb|EEF40183.1| hypothetical protein
           RCOM_1732210 [Ricinus communis]
          Length = 95

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/86 (39%), Positives = 50/86 (58%)
 Frame = +3

Query: 57  PRIRSTQWLPPTAPTTKINTDGASRGNPGNAGVGATYRNCNGDFLLVFHRHIGVTSSYWA 236
           P+I + +W PP     K+N++GA+RG PG  GVG  +RNC G     F   +  T ++ A
Sbjct: 2   PKIFTIKWHPPPPSWIKLNSNGATRGAPGTTGVGGLFRNCRGVVKGCFIVPLSTTYAFVA 61

Query: 237 ECLAIVEGLEVAIEKGWLDVWIESDS 314
           E  A + G++ A   GW  +W+ESDS
Sbjct: 62  EIKAAIYGIDKAYNFGWNKIWLESDS 87


>gb|EEC81198.1| hypothetical protein OsI_24213 [Oryza sativa Indica Group]
          Length = 206

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/91 (40%), Positives = 50/91 (54%)
 Frame = +3

Query: 42  RLRNAPRIRSTQWLPPTAPTTKINTDGASRGNPGNAGVGATYRNCNGDFLLVFHRHIGVT 221
           RLR      +  W  P    TK+N DG+S+ + G A +G  YR+ +G FLL +   IG  
Sbjct: 33  RLRAYSSASARIWRKPEEGWTKLNFDGSSKHSTGIASIGGVYRDHDGAFLLGYAERIGTA 92

Query: 222 SSYWAECLAIVEGLEVAIEKGWLDVWIESDS 314
           +S  AE  A+  GLE+A+  GW  VW E DS
Sbjct: 93  TSSVAELAALRRGLELAVRNGWRRVWAEGDS 123


>ref|XP_002317250.1| predicted protein [Populus trichocarpa] gi|222860315|gb|EEE97862.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/79 (41%), Positives = 47/79 (59%)
 Frame = +3

Query: 78  WLPPTAPTTKINTDGASRGNPGNAGVGATYRNCNGDFLLVFHRHIGVTSSYWAECLAIVE 257
           W  P    TK+N DG+ + + G A +G  +RN   +FLL +   IG T+S  AE  A+  
Sbjct: 6   WEKPQIGWTKLNFDGSCKDSAGKASIGGVFRNHEAEFLLGYAESIGRTTSMIAELAALRR 65

Query: 258 GLEVAIEKGWLDVWIESDS 314
           GLE+ +E GW +VW+E DS
Sbjct: 66  GLELVLENGWGNVWLEGDS 84


>ref|XP_002869889.1| At4g21420 [Arabidopsis lyrata subsp. lyrata]
           gi|297315725|gb|EFH46148.1| At4g21420 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 201

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/79 (41%), Positives = 45/79 (56%)
 Frame = +3

Query: 78  WLPPTAPTTKINTDGASRGNPGNAGVGATYRNCNGDFLLVFHRHIGVTSSYWAECLAIVE 257
           W  P     K+N DG SRG  G A +G  +RN   +FLL +   IG  +S  AE  A+  
Sbjct: 35  WKKPQIGWIKLNFDG-SRGREGQASIGGIFRNHKAEFLLGYSESIGEATSTMAEFAALKR 93

Query: 258 GLEVAIEKGWLDVWIESDS 314
           GLE+ +E GW D+W+E D+
Sbjct: 94  GLELVLENGWTDIWLEGDA 112


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