BLASTX nr result

ID: Coptis21_contig00012163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012163
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150568.1| PREDICTED: uncharacterized protein PAM68-lik...   161   2e-37
ref|XP_002274943.1| PREDICTED: uncharacterized LOC100266405 [Vit...   161   2e-37
ref|XP_002513644.1| conserved hypothetical protein [Ricinus comm...   140   6e-31
ref|XP_002305939.1| predicted protein [Populus trichocarpa] gi|1...   138   2e-30
ref|NP_001239781.1| uncharacterized protein LOC100782877 [Glycin...   134   5e-29

>ref|XP_004150568.1| PREDICTED: uncharacterized protein PAM68-like [Cucumis sativus]
           gi|449525666|ref|XP_004169837.1| PREDICTED:
           uncharacterized protein PAM68-like [Cucumis sativus]
          Length = 180

 Score =  161 bits (408), Expect = 2e-37
 Identities = 85/158 (53%), Positives = 106/158 (67%)
 Frame = -2

Query: 853 TVTSNPLDLASTNNSTWKLQAEAKGFGRESTTVSKRGSQNNTTSKQTXXXXXXXXDKIPQ 674
           T+T+N  +   T  S  ++Q  AKGF     T S R ++N  T+ Q          +IP+
Sbjct: 31  TITNNLTNFTPTL-SRGQVQVNAKGF-----TNSPRTAKNRETTAQNNNEDDDD--EIPE 82

Query: 673 VVWDRMIVRILFYVGIPMATGIALLCIFSVLKEQKILDVPAWIPFVTTLLAFGTSTLGIA 494
            V+ R+I RIL +VGIPMA G+ LL IF  +KEQ + DVP W+PF TT L FG ST+GIA
Sbjct: 83  AVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIA 142

Query: 493 YGTLSTSLDPKNKGSVLGWEEVQQNWPEMWREEDENRR 380
           YGTLSTSLDP+ KGSVLGWEE Q+NW EMW+EEDE RR
Sbjct: 143 YGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR 180


>ref|XP_002274943.1| PREDICTED: uncharacterized LOC100266405 [Vitis vinifera]
           gi|302143781|emb|CBI22642.3| unnamed protein product
           [Vitis vinifera]
          Length = 178

 Score =  161 bits (408), Expect = 2e-37
 Identities = 81/140 (57%), Positives = 101/140 (72%), Gaps = 2/140 (1%)
 Frame = -2

Query: 808 TWKLQAEAKGFG-RESTTVSKRGSQNNTTS-KQTXXXXXXXXDKIPQVVWDRMIVRILFY 635
           TWKL AEAKGFG    T + K+ +Q  T   K +        +KIPQVV+DRMIVRILF+
Sbjct: 39  TWKLHAEAKGFGVAPGTILEKKTAQKETVPRKNSGNGDDDDDEKIPQVVFDRMIVRILFF 98

Query: 634 VGIPMATGIALLCIFSVLKEQKILDVPAWIPFVTTLLAFGTSTLGIAYGTLSTSLDPKNK 455
           VG PM  G+ALL +F  +K+Q + DVP W+PF+TTL+AFG S LGIAYGTLSTS D + K
Sbjct: 99  VGAPMGIGVALLNLFGAVKDQHLWDVPVWLPFLTTLIAFGASALGIAYGTLSTSWDAEKK 158

Query: 454 GSVLGWEEVQQNWPEMWREE 395
           GS+LG EE QQNW ++W+EE
Sbjct: 159 GSLLGLEEAQQNWVDVWKEE 178


>ref|XP_002513644.1| conserved hypothetical protein [Ricinus communis]
           gi|223547552|gb|EEF49047.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  140 bits (352), Expect = 6e-31
 Identities = 89/190 (46%), Positives = 113/190 (59%), Gaps = 6/190 (3%)
 Frame = -2

Query: 937 MNTLIS-QRLPLLYIKSSQCVKRNSFLQPTVTSNPLDLASTNNSTWK--LQAEAKGF-GR 770
           MN L+S QR PL   K S   K       T + +P    S NN + +  L A AKGF  R
Sbjct: 1   MNALVSSQRSPLYLTKPSPQWKSK-----TPSHHPTIFRSQNNPSTRSRLNANAKGFTSR 55

Query: 769 ESTTVSKRGSQN--NTTSKQTXXXXXXXXDKIPQVVWDRMIVRILFYVGIPMATGIALLC 596
           +   + K  + +   TTS +         +++P+ V +R+I RIL  VG+PMA G+A L 
Sbjct: 56  KPPHMIKENTLDIKTTTSNE---HNGSDDEELPKEVVNRVIKRILVSVGVPMALGLAFLK 112

Query: 595 IFSVLKEQKILDVPAWIPFVTTLLAFGTSTLGIAYGTLSTSLDPKNKGSVLGWEEVQQNW 416
            F  ++EQ I DVP WI F TT L FGTS LGIAYG LS SLDP  KGS+LG+EEVQ+NW
Sbjct: 113 FFGSVREQGIWDVPVWIVFATTFLTFGTSALGIAYGALSASLDPNKKGSLLGFEEVQENW 172

Query: 415 PEMWREEDEN 386
            EMW+EED N
Sbjct: 173 VEMWKEEDGN 182


>ref|XP_002305939.1| predicted protein [Populus trichocarpa] gi|118488155|gb|ABK95897.1|
           unknown [Populus trichocarpa]
           gi|222848903|gb|EEE86450.1| predicted protein [Populus
           trichocarpa]
          Length = 182

 Score =  138 bits (348), Expect = 2e-30
 Identities = 81/189 (42%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
 Frame = -2

Query: 937 MNTLI-SQRLPLLYIKSSQCVKRNSFLQPTVTSNPLDLASTNNSTWKLQAEAKGFGREST 761
           MNTL+ SQ+ PL    SS        + PT     L+      +TWK+QA AKGFG    
Sbjct: 1   MNTLVCSQKSPLYLANSSPWKPMAPSILPTSIQKTLN---NPPATWKVQASAKGFGSAPP 57

Query: 760 TVSKRGSQNNTTSKQTXXXXXXXXDKIPQVVWDRMIVRILFYVGIPMATGIALLCIFSVL 581
           ++ +  S    TSK T         +IP+ V  R+I R+L  VG PMA   A + +  ++
Sbjct: 58  SIQE--SSIKKTSKNTNNNDDE---EIPEEVLYRIIKRVLVSVGAPMALAFASMNVIGLV 112

Query: 580 KEQKILDVPAWIPFVTTLLAFGTSTLGIAYGTLSTSLDPKNKGSVLGWEEVQQNWPEMWR 401
            EQ I +VP W  F+T  L  G S  GIAYG LSTS+DP  KGS LG+E+VQ+NW EMW+
Sbjct: 113 MEQHIWNVPKWFMFLTLFLTLGASVCGIAYGALSTSMDPNEKGSFLGFEQVQKNWVEMWK 172

Query: 400 EEDENRR*W 374
           EEDE ++ W
Sbjct: 173 EEDEGKKSW 181


>ref|NP_001239781.1| uncharacterized protein LOC100782877 [Glycine max]
           gi|255638580|gb|ACU19597.1| unknown [Glycine max]
          Length = 183

 Score =  134 bits (336), Expect = 5e-29
 Identities = 71/144 (49%), Positives = 91/144 (63%), Gaps = 2/144 (1%)
 Frame = -2

Query: 811 STWKLQAEAKGFGRESTTVSKRGSQNNTTSKQTXXXXXXXXDKIPQVVWDRMIVRILFYV 632
           +T K +A AKGF           + N T             D++PQ V  R+I RILF V
Sbjct: 40  TTLKPRASAKGFSSTGPPTVASDNANTTKKPMRRKNNDDDDDELPQEVMYRLIGRILFSV 99

Query: 631 GIPMATGIALLCIFSVLKEQKILDVPAWIPFVTTLLAFGTSTLGIAYGTLSTSLDPKNKG 452
           G+PM  G+ALL +F  LKE+ + D P W+PF+TTLL FG S+LGIAYG LSTSLD + +G
Sbjct: 100 GVPMGLGLALLGLFGELKEKHVWDAPLWLPFLTTLLTFGASSLGIAYGALSTSLDAEKEG 159

Query: 451 SVLGWEEVQQNWPEMWRE--EDEN 386
           S LG E++Q+NW EMW+E  EDEN
Sbjct: 160 SFLGVEQLQKNWVEMWQEKQEDEN 183


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