BLASTX nr result

ID: Coptis21_contig00012160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012160
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597637.1| hypothetical protein MTR_2g100440 [Medicago ...    54   1e-05
ref|XP_002515929.1| conserved hypothetical protein [Ricinus comm...    54   1e-05

>ref|XP_003597637.1| hypothetical protein MTR_2g100440 [Medicago truncatula]
           gi|355486685|gb|AES67888.1| hypothetical protein
           MTR_2g100440 [Medicago truncatula]
          Length = 71

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/70 (41%), Positives = 36/70 (51%)
 Frame = +1

Query: 100 METKSKTSTMATLLILCLVLCPIFSCDAARSPRPDKRVYCPQCVCSEAPYPAGSCCRCAL 279
           M T S   T+ T+ I  + L P   CDA R      R  CP CVC   P P GSCC+C  
Sbjct: 1   MATNSLKFTLVTIFIFAMTLSPTLPCDAVRVSLAVSRPVCPACVCCSPP-PLGSCCKCC- 58

Query: 280 GSSPSVEIQT 309
            +SP ++ QT
Sbjct: 59  -ASP-IQTQT 66


>ref|XP_002515929.1| conserved hypothetical protein [Ricinus communis]
           gi|223544834|gb|EEF46349.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 75

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/75 (42%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
 Frame = +1

Query: 100 METKSKTSTMATLLILCLVLCPIFSCDAARSPRPD----KRVYCPQCVCSEAPYPAGSCC 267
           M T S  S+  T L+  ++L PI   +AAR    D    +   CP CVC  AP P GSCC
Sbjct: 1   MATNSLKSSFVTFLVFAMILSPIIPSEAARLNHRDLLQTRPPICPACVCC-APPPPGSCC 59

Query: 268 RCALGSSPSVEIQTN 312
           RC   +SP V   TN
Sbjct: 60  RCC--ASPIVTESTN 72


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