BLASTX nr result
ID: Coptis21_contig00012137
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00012137
(1919 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing prot... 694 0.0
emb|CBI23243.3| unnamed protein product [Vitis vinifera] 692 0.0
ref|XP_003529632.1| PREDICTED: tRNA wybutosine-synthesizing prot... 691 0.0
ref|XP_003610434.1| tRNA wybutosine-synthesizing protein 2/3/4 [... 667 0.0
ref|XP_002304908.1| predicted protein [Populus trichocarpa] gi|2... 665 0.0
>ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Vitis
vinifera]
Length = 1018
Score = 694 bits (1792), Expect = 0.0
Identities = 368/583 (63%), Positives = 422/583 (72%), Gaps = 8/583 (1%)
Frame = -1
Query: 1919 DTIACLWKKEKTAGTPPLAKFSHSMFIYKNYLGILGGCPVIQNNQEMSLLDLQIGLWKHV 1740
D CLWKKE +G P A+FSHSMFIYKNYLGI+GGCPV Q+ QE++LLDLQ +W++
Sbjct: 461 DVQTCLWKKEVASGRTPYARFSHSMFIYKNYLGIIGGCPVRQHCQELALLDLQHHVWRNE 520
Query: 1739 ILNMVSKELFVRSTXXXXXXXXXXXXXGASCYAFGTKFSLPMKISLLPYVSFSDT-VTLH 1563
IL+ V K LFVRST GASCYAFGTKFS PMKI+LL VS DT V
Sbjct: 521 ILDSVFKVLFVRSTASVVGDDLIMIGGGASCYAFGTKFSGPMKINLLQLVSLHDTLVPSE 580
Query: 1562 SKEMPSRHHPETVLENITGSVFFAAKNVQTLTKSCISNYKTEVLGENFDIEQG--ATHWV 1389
+E + H E V E G + + D+E+ A +WV
Sbjct: 581 MEEKHAIHQYEGVKEKKNGDL-------------------------HVDVEKQMVAVYWV 615
Query: 1388 LRLERKYAKLGKDILKKFGWLDLRRKVYSSENGSHICLPVTDKFYPLFHEKQFNLMDSND 1209
L+LERKYAKLGKDILKKFGWLDL RKV+S E+ HIC PVT+KF +F+EK DS+D
Sbjct: 616 LQLERKYAKLGKDILKKFGWLDLGRKVHSREDRRHICFPVTEKFCTIFNEKDH---DSSD 672
Query: 1208 GLSTP-----CKPVNIEELSTYDFTCETALDNLFLLGGLIVKDEVACERIAPKSPQKVMS 1044
P KP E + D + TAL L G + DEV R P SP K+MS
Sbjct: 673 AFEVPNELHLYKPSTGEGVLLNDISFVTALRLLKECGATKLADEVVEVRRTPSSPLKIMS 732
Query: 1043 EAVESLIMKMGLPARLLEEVPTRWERLGDIVVLPVNSFRDASWNSIGRELWPTVAKSLGT 864
EAV SLI GL ++LLE++PTRWERLGDIVVLPV SF+D W+SIG ELWP +AKSL T
Sbjct: 733 EAVASLIKHRGLSSQLLEQLPTRWERLGDIVVLPVTSFKDPIWDSIGDELWPIIAKSLNT 792
Query: 863 RRLARQGRVASTGTRDSTLDILVGDDGWVDHRENGILYSFDATKCMFSWGNLSEKLRMAC 684
RLARQGRVA +GTRDSTL+ILVGD+GWVDH ENGILYSFDATKCMFSWGNLSEKLRM C
Sbjct: 793 CRLARQGRVAPSGTRDSTLEILVGDNGWVDHCENGILYSFDATKCMFSWGNLSEKLRMGC 852
Query: 683 LDCKGEVIVDLFAGIGYFVLPFLVRAKAKMVYACEWNPHALEALQRNVESNSVGDRCVIL 504
L+C+ EVIVDLFAGIGYFVLPFLV AKAK+VYACEWNPHA+EALQ N+ +NSV DRC+IL
Sbjct: 853 LNCRDEVIVDLFAGIGYFVLPFLVSAKAKLVYACEWNPHAVEALQHNLLANSVADRCIIL 912
Query: 503 EGDNRATAPKGVADRVCLGLLPSSEGSWLTAVRALRMEGGMLHVHGIAKDSEESIWSDHV 324
EGDNR TAPKGVADRVCLGLLPSSEGSW TAVRALR EGGMLHVHG AKDSEE WS+HV
Sbjct: 913 EGDNRLTAPKGVADRVCLGLLPSSEGSWATAVRALRTEGGMLHVHGNAKDSEEGSWSEHV 972
Query: 323 ANSIQNIAKSECLCWEVSVQHLERVKWYGPHIRHLVLDVRCKQ 195
+ SI ++A+SE WEVSV+H+ERVKWY PHIRHLV DVRC+Q
Sbjct: 973 SKSICDLARSEGYDWEVSVEHVERVKWYAPHIRHLVADVRCRQ 1015
>emb|CBI23243.3| unnamed protein product [Vitis vinifera]
Length = 1013
Score = 692 bits (1785), Expect = 0.0
Identities = 364/580 (62%), Positives = 420/580 (72%), Gaps = 5/580 (0%)
Frame = -1
Query: 1919 DTIACLWKKEKTAGTPPLAKFSHSMFIYKNYLGILGGCPVIQNNQEMSLLDLQIGLWKHV 1740
D CLWKKE +G P A+FSHSMFIYKNYLGI+GGCPV Q+ QE++LLDLQ +W++
Sbjct: 461 DVQTCLWKKEVASGRTPYARFSHSMFIYKNYLGIIGGCPVRQHCQELALLDLQHHVWRNE 520
Query: 1739 ILNMVSKELFVRSTXXXXXXXXXXXXXGASCYAFGTKFSLPMKISLLPYVSFSDTVTLHS 1560
IL+ V K LFVRST GASCYAFGTKFS PMKI+LL VS DT+
Sbjct: 521 ILDSVFKVLFVRSTASVVGDDLIMIGGGASCYAFGTKFSGPMKINLLQLVSLHDTL---- 576
Query: 1559 KEMPSRHHPETVLENITGSVFFAAKNVQTLTKSCISNYKTEVLGENFDIEQGATHWVLRL 1380
+PS + + G + K +V + + A +WVL+L
Sbjct: 577 --VPSEMEEKHAIHQYEG----------------VKEKKNDV-----EKQMVAVYWVLQL 613
Query: 1379 ERKYAKLGKDILKKFGWLDLRRKVYSSENGSHICLPVTDKFYPLFHEKQFNLMDSNDGLS 1200
ERKYAKLGKDILKKFGWLDL RKV+S E+ HIC PVT+KF +F+EK DS+D
Sbjct: 614 ERKYAKLGKDILKKFGWLDLGRKVHSREDRRHICFPVTEKFCTIFNEKDH---DSSDAFE 670
Query: 1199 TP-----CKPVNIEELSTYDFTCETALDNLFLLGGLIVKDEVACERIAPKSPQKVMSEAV 1035
P KP E + D + TAL L G + DEV R P SP K+MSEAV
Sbjct: 671 VPNELHLYKPSTGEGVLLNDISFVTALRLLKECGATKLADEVVEVRRTPSSPLKIMSEAV 730
Query: 1034 ESLIMKMGLPARLLEEVPTRWERLGDIVVLPVNSFRDASWNSIGRELWPTVAKSLGTRRL 855
SLI GL ++LLE++PTRWERLGDIVVLPV SF+D W+SIG ELWP +AKSL T RL
Sbjct: 731 ASLIKHRGLSSQLLEQLPTRWERLGDIVVLPVTSFKDPIWDSIGDELWPIIAKSLNTCRL 790
Query: 854 ARQGRVASTGTRDSTLDILVGDDGWVDHRENGILYSFDATKCMFSWGNLSEKLRMACLDC 675
ARQGRVA +GTRDSTL+ILVGD+GWVDH ENGILYSFDATKCMFSWGNLSEKLRM CL+C
Sbjct: 791 ARQGRVAPSGTRDSTLEILVGDNGWVDHCENGILYSFDATKCMFSWGNLSEKLRMGCLNC 850
Query: 674 KGEVIVDLFAGIGYFVLPFLVRAKAKMVYACEWNPHALEALQRNVESNSVGDRCVILEGD 495
+ EVIVDLFAGIGYFVLPFLV AKAK+VYACEWNPHA+EALQ N+ +NSV DRC+ILEGD
Sbjct: 851 RDEVIVDLFAGIGYFVLPFLVSAKAKLVYACEWNPHAVEALQHNLLANSVADRCIILEGD 910
Query: 494 NRATAPKGVADRVCLGLLPSSEGSWLTAVRALRMEGGMLHVHGIAKDSEESIWSDHVANS 315
NR TAPKGVADRVCLGLLPSSEGSW TAVRALR EGGMLHVHG AKDSEE WS+HV+ S
Sbjct: 911 NRLTAPKGVADRVCLGLLPSSEGSWATAVRALRTEGGMLHVHGNAKDSEEGSWSEHVSKS 970
Query: 314 IQNIAKSECLCWEVSVQHLERVKWYGPHIRHLVLDVRCKQ 195
I ++A+SE WEVSV+H+ERVKWY PHIRHLV DVRC+Q
Sbjct: 971 ICDLARSEGYDWEVSVEHVERVKWYAPHIRHLVADVRCRQ 1010
>ref|XP_003529632.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Glycine
max]
Length = 1068
Score = 691 bits (1784), Expect = 0.0
Identities = 351/573 (61%), Positives = 426/573 (74%), Gaps = 4/573 (0%)
Frame = -1
Query: 1901 WKKEKTAGTPPLAKFSHSMFIYKNYLGILGGCPVIQNNQEMSLLDLQIGLWKHVILNMVS 1722
W KE+TAG P A+FSHS+F+YKNYLG+LGGCPV Q+ QE++LLDL++ LWKHV LN V
Sbjct: 495 WTKERTAGRNPHARFSHSIFLYKNYLGVLGGCPVRQHCQELALLDLKLRLWKHVTLNSVG 554
Query: 1721 KELFVRSTXXXXXXXXXXXXXGASCYAFGTKFSLPMKISLLPYVSFSDTVTLHSKEMPSR 1542
K+LFVRST GASCYAFGTKFS P K+SLL + D ++ S
Sbjct: 555 KDLFVRSTANVVGDDLAIVGGGASCYAFGTKFSEPAKVSLLHLMHSHDEPVKTQRKRTSN 614
Query: 1541 HHPETVLENITGSVFFAAKNVQTLTKSCISNYKTEVLGENFDIEQGATHWVLRLERKYAK 1362
+ T NI S ++ +++ S+ + N + A H+VL+LE+KYAK
Sbjct: 615 QNEGTNRNNIENSCGPQLEHAPNISEDESSHSDDNIPCLNDQSQMIALHYVLQLEKKYAK 674
Query: 1361 LGKDILKKFGWLDLRRKVYSSENGSHICLPVTDKFYPLFHEKQFNLMDS----NDGLSTP 1194
LGKDILKKFGWLDL RK YS E G HI PV +F+ +FHE+ NL D+ N+GL +
Sbjct: 675 LGKDILKKFGWLDLGRKAYSDEGGVHIGFPVHQEFFAVFHERNHNLGDAFDRQNEGLFS- 733
Query: 1193 CKPVNIEELSTYDFTCETALDNLFLLGGLIVKDEVACERIAPKSPQKVMSEAVESLIMKM 1014
KP+ ++ + +C AL L G +++ D+V ER A KSP KVM+EA+ SLI
Sbjct: 734 -KPLKRDKFLLNELSCSEALILLHEYGAIVLGDKVVEERKAAKSPLKVMTEAITSLIEHK 792
Query: 1013 GLPARLLEEVPTRWERLGDIVVLPVNSFRDASWNSIGRELWPTVAKSLGTRRLARQGRVA 834
GLPARLLEE+PTRW++LGDIV+LP SF+D+ W+SI ELW VAKSL RLARQG VA
Sbjct: 793 GLPARLLEELPTRWDQLGDIVLLPSTSFKDSMWDSIAEELWSIVAKSLKAHRLARQGPVA 852
Query: 833 STGTRDSTLDILVGDDGWVDHRENGILYSFDATKCMFSWGNLSEKLRMACLDCKGEVIVD 654
+TGTRDSTL ILVGD+GWV+HRENGILYSFDATKCMFSWGNLSEK+RMA LDCK EV+VD
Sbjct: 853 ATGTRDSTLQILVGDNGWVNHRENGILYSFDATKCMFSWGNLSEKIRMARLDCKDEVVVD 912
Query: 653 LFAGIGYFVLPFLVRAKAKMVYACEWNPHALEALQRNVESNSVGDRCVILEGDNRATAPK 474
LFAGIGYFVLPFLVRA+AK+VYACEWNPHA+EALQ N+E+NSV DRC+ILEGDNR TAPK
Sbjct: 913 LFAGIGYFVLPFLVRAQAKLVYACEWNPHAVEALQHNLEANSVADRCIILEGDNRITAPK 972
Query: 473 GVADRVCLGLLPSSEGSWLTAVRALRMEGGMLHVHGIAKDSEESIWSDHVANSIQNIAKS 294
VADRVCLGL+PSSE SW+TAVRALR EGG+LHVHG +DSEES W DHV+ SI +IA+S
Sbjct: 973 SVADRVCLGLIPSSELSWVTAVRALRREGGILHVHGNTRDSEESQWIDHVSKSIYDIARS 1032
Query: 293 ECLCWEVSVQHLERVKWYGPHIRHLVLDVRCKQ 195
E WEVS++H+ERVKWY PHIRH+V DVRC+Q
Sbjct: 1033 EGYTWEVSIEHVERVKWYAPHIRHVVADVRCRQ 1065
>ref|XP_003610434.1| tRNA wybutosine-synthesizing protein 2/3/4 [Medicago truncatula]
gi|355511489|gb|AES92631.1| tRNA wybutosine-synthesizing
protein 2/3/4 [Medicago truncatula]
Length = 1046
Score = 667 bits (1720), Expect = 0.0
Identities = 342/576 (59%), Positives = 417/576 (72%), Gaps = 7/576 (1%)
Frame = -1
Query: 1901 WKKEKTAGTPPLAKFSHSMFIYKNYLGILGGCPVIQNNQEMSLLDLQIGLWKHVILNMVS 1722
WKKE TAG P +FSHS+F+YKNYLG+LGGCPV Q+ QE++LLDL++ +WKHV LN V
Sbjct: 474 WKKEITAGRNPHPRFSHSIFVYKNYLGVLGGCPVTQHCQELALLDLKLHIWKHVTLNSVG 533
Query: 1721 KELFVRSTXXXXXXXXXXXXXGASCYAFGTKFSLPMKISLLPYVSFSDTVTLHSKEMPSR 1542
K+LFVRST GASCYAFGTKFS P K+SLL ++ H MP +
Sbjct: 534 KDLFVRSTANVVGDDLVIVGGGASCYAFGTKFSEPAKVSLL------HSMHSHDDFMPVK 587
Query: 1541 HHPETVLENITGSVFFAAKNVQTLTKSCISNYKTEVLGENFDIEQGAT-----HWVLRLE 1377
+ + +++ G+ ++ Q IS ++ EN G + H VL+LE
Sbjct: 588 NQKQHIIDQNGGNKVENSQGPQLEHPPNISENESLYFNENVLHINGQSQTIPLHCVLQLE 647
Query: 1376 RKYAKLGKDILKKFGWLDLRRKVYSSENGSHICLPVTDKFYPLFHEKQFNLMDSNDGLST 1197
+KYAK GKDILKKFGWLDL RKVYS E G HIC PV + + +FHE+ + D D +
Sbjct: 648 KKYAKQGKDILKKFGWLDLGRKVYSEEGGVHICFPVHQELFAVFHERSQHSGDPIDRENK 707
Query: 1196 P--CKPVNIEELSTYDFTCETALDNLFLLGGLIVKDEVACERIAPKSPQKVMSEAVESLI 1023
KP+ +C AL L G ++++D+V + A SP KVMSE V SLI
Sbjct: 708 IPLSKPLTQAGYLLNKLSCSEALTLLHEYGAVLLEDKVVETKKAAMSPLKVMSEGVTSLI 767
Query: 1022 MKMGLPARLLEEVPTRWERLGDIVVLPVNSFRDASWNSIGRELWPTVAKSLGTRRLARQG 843
+ GLP LLEE+PTRW+R+GDIV+LP SF+++ W+SI ELW VAKSL RLARQG
Sbjct: 768 EEKGLPTGLLEELPTRWDRIGDIVILPATSFKNSLWDSIAEELWLIVAKSLKAHRLARQG 827
Query: 842 RVASTGTRDSTLDILVGDDGWVDHRENGILYSFDATKCMFSWGNLSEKLRMACLDCKGEV 663
VA+TGTRDSTL+ILVGDDGWV+HRENGI YSF+ATKCMFSWGNLSEKLRMA +DCK EV
Sbjct: 828 PVAATGTRDSTLEILVGDDGWVNHRENGIHYSFNATKCMFSWGNLSEKLRMAQMDCKDEV 887
Query: 662 IVDLFAGIGYFVLPFLVRAKAKMVYACEWNPHALEALQRNVESNSVGDRCVILEGDNRAT 483
IVDLFAGIGYFVLPFLVRA AK+VYACEWNPHA+EAL+ N++SNSV +RC+++EGDNR T
Sbjct: 888 IVDLFAGIGYFVLPFLVRAHAKLVYACEWNPHAIEALRHNLQSNSVAERCIVIEGDNRNT 947
Query: 482 APKGVADRVCLGLLPSSEGSWLTAVRALRMEGGMLHVHGIAKDSEESIWSDHVANSIQNI 303
APKGVADRVCLGLLPSSE SW+TAVRALR EGG+LHVHG AKDSEE W+DHV+ SI I
Sbjct: 948 APKGVADRVCLGLLPSSECSWVTAVRALRKEGGILHVHGNAKDSEEYQWTDHVSKSIYEI 1007
Query: 302 AKSECLCWEVSVQHLERVKWYGPHIRHLVLDVRCKQ 195
A+SE CWEV+++H+ERVKWY PHIRH+V DVRCKQ
Sbjct: 1008 ARSEGYCWEVTIEHVERVKWYAPHIRHVVADVRCKQ 1043
>ref|XP_002304908.1| predicted protein [Populus trichocarpa] gi|222847872|gb|EEE85419.1|
predicted protein [Populus trichocarpa]
Length = 1031
Score = 665 bits (1717), Expect = 0.0
Identities = 342/575 (59%), Positives = 418/575 (72%), Gaps = 2/575 (0%)
Frame = -1
Query: 1919 DTIACLWKKEKTAGTPPLAKFSHSMFIYKNYLGILGGCPVIQNNQEMSLLDLQIGLWKHV 1740
D C+WK EKT G P A+FSHSMF+YK++LG++GGCPV Q+ QE++LLDLQ WK V
Sbjct: 474 DVQTCMWKLEKTDGRSPHARFSHSMFVYKDFLGVIGGCPVGQHFQELALLDLQSHTWKQV 533
Query: 1739 ILNMVSKELFVRSTXXXXXXXXXXXXXGASCYAFGTKFSLPMKISLLPYVSFSDTVTLHS 1560
L+ + KEL VR+T GA+CYAFGTKFS P K++LLP V D
Sbjct: 534 TLDYIGKELLVRTTANVVGDDLVIIGGGAACYAFGTKFSKPFKVNLLPLVPLGD------ 587
Query: 1559 KEMPSRHHPETVLENITGSVFFAAKNVQTLTKSCISNYKTEVLGENFDIEQGATHWVLRL 1380
K MP+ +N+ V A +N + LT+S + N++ E ++ + VL+L
Sbjct: 588 KLMPTE-------KNVNFRVSHA-ENAEALTQSPVMNFEAE---KHLLVSYNR---VLQL 633
Query: 1379 ERKYAKLGKDILKKFGWLDLRRKVYSSENGSHICLPVTDKFYPLFHEKQFNLMDS-NDGL 1203
E+KYAK+GKDILK FGWLDL RKVY+ E+G HIC P+T+KF +F +K +D +G
Sbjct: 634 EKKYAKMGKDILKNFGWLDLGRKVYTKEDGLHICFPITEKFSAMFLKKHDQDVDVFEEGN 693
Query: 1202 ST-PCKPVNIEELSTYDFTCETALDNLFLLGGLIVKDEVACERIAPKSPQKVMSEAVESL 1026
T CKP + + +C TAL+ L G + +EV R + KSP + M+E++ L
Sbjct: 694 DTFVCKPFTGGGILLNEVSCSTALNFLKKCGATNLANEVGEVRKSSKSPFQTMNESIALL 753
Query: 1025 IMKMGLPARLLEEVPTRWERLGDIVVLPVNSFRDASWNSIGRELWPTVAKSLGTRRLARQ 846
I + L LLE++P RWERLGDIVVLP SF+D W+SI +ELWP VAKSL TRR+ARQ
Sbjct: 754 IKQKDLAETLLEQLPNRWERLGDIVVLPATSFKDPIWDSISKELWPIVAKSLNTRRVARQ 813
Query: 845 GRVASTGTRDSTLDILVGDDGWVDHRENGILYSFDATKCMFSWGNLSEKLRMACLDCKGE 666
GRVASTGTRDSTL+ILVGD+GWVDHRENGILYSFDATKCMFSWGNLSEKLRM L+CK E
Sbjct: 814 GRVASTGTRDSTLEILVGDNGWVDHRENGILYSFDATKCMFSWGNLSEKLRMGNLECKDE 873
Query: 665 VIVDLFAGIGYFVLPFLVRAKAKMVYACEWNPHALEALQRNVESNSVGDRCVILEGDNRA 486
VIVDLFAGIGYF LPFLVRAKAK+VYACEWNPHA+EAL+RN+E NSV DRC++LEGDNR
Sbjct: 874 VIVDLFAGIGYFTLPFLVRAKAKLVYACEWNPHAVEALRRNLEVNSVSDRCIVLEGDNRM 933
Query: 485 TAPKGVADRVCLGLLPSSEGSWLTAVRALRMEGGMLHVHGIAKDSEESIWSDHVANSIQN 306
TAPKG+A+RVCLGLLP+SE SW TAVRALR EGGMLHVHG KDS+ES+W+ HV SI
Sbjct: 934 TAPKGIANRVCLGLLPTSEDSWATAVRALRSEGGMLHVHGNVKDSQESLWTAHVLKSIDE 993
Query: 305 IAKSECLCWEVSVQHLERVKWYGPHIRHLVLDVRC 201
IA+ E CWEVS++H+ERVKWY PHIRHLV DVRC
Sbjct: 994 IARFEGHCWEVSIEHVERVKWYAPHIRHLVADVRC 1028