BLASTX nr result

ID: Coptis21_contig00012127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012127
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523036.1| ATP synthase subunit d, putative [Ricinus co...   457   e-126
ref|XP_002282632.1| PREDICTED: V-type proton ATPase subunit D is...   455   e-126
ref|XP_002532689.1| ATP synthase subunit d, putative [Ricinus co...   451   e-124
ref|XP_004140139.1| PREDICTED: V-type proton ATPase subunit D-li...   440   e-121
ref|XP_002300100.1| predicted protein [Populus trichocarpa] gi|2...   437   e-120

>ref|XP_002523036.1| ATP synthase subunit d, putative [Ricinus communis]
           gi|223537719|gb|EEF39340.1| ATP synthase subunit d,
           putative [Ricinus communis]
          Length = 261

 Score =  457 bits (1175), Expect = e-126
 Identities = 235/261 (90%), Positives = 252/261 (96%)
 Frame = +3

Query: 126 MSSQTQRLTVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 305
           MS Q QRL VVPTVTML VVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG
Sbjct: 1   MSGQGQRLNVVPTVTMLAVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 306 EIMKTSSFALTEAKYVAGENIKHIVLENVHTATLKVRSRQENVAGVKLPKFEYFTEGETK 485
           EIMK+SSFALTEAKYVAGEN+KH+VLENVH A+LKVRSRQENVAGVKLPKF+YFTEGETK
Sbjct: 61  EIMKSSSFALTEAKYVAGENVKHVVLENVHNASLKVRSRQENVAGVKLPKFDYFTEGETK 120

Query: 486 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 665
           NDLTGLARGGQQVQ CRAAYVK+IEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQACRAAYVKSIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 666 RLENTISYIKGELDELEREDFFRLKKIQGYKKRELERQLASAQQFAEEQVAEKVSLKKGI 845
           RLENTISYIKGELDELEREDFFRLKKIQGYKKRE+ERQLA+A+QFAEEQ AEK+SL+KGI
Sbjct: 181 RLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQLAAAKQFAEEQFAEKISLQKGI 240

Query: 846 SMNAAHNLLNDSMKKDEDIIF 908
           S+ +AHN+L+ +M+KDEDIIF
Sbjct: 241 SLKSAHNMLSAAMEKDEDIIF 261


>ref|XP_002282632.1| PREDICTED: V-type proton ATPase subunit D isoform 1 [Vitis
           vinifera] gi|359485322|ref|XP_003633257.1| PREDICTED:
           V-type proton ATPase subunit D isoform 2 [Vitis
           vinifera]
          Length = 261

 Score =  455 bits (1171), Expect = e-126
 Identities = 235/261 (90%), Positives = 252/261 (96%)
 Frame = +3

Query: 126 MSSQTQRLTVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 305
           MS Q+QRLTVVPTVTMLGV+KARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG
Sbjct: 1   MSGQSQRLTVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 306 EIMKTSSFALTEAKYVAGENIKHIVLENVHTATLKVRSRQENVAGVKLPKFEYFTEGETK 485
           E+MK SSFALTEAKYVAGENIKH+VLENV  A+LKVRSRQENVAGVKLPKFEYF EGETK
Sbjct: 61  EVMKASSFALTEAKYVAGENIKHVVLENVQNASLKVRSRQENVAGVKLPKFEYFNEGETK 120

Query: 486 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 665
           NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLD+AIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDDAIKTTNRRVNALENVVKP 180

Query: 666 RLENTISYIKGELDELEREDFFRLKKIQGYKKRELERQLASAQQFAEEQVAEKVSLKKGI 845
           RLENTI YIKGELDELEREDFFRLKKIQGYKKRE+ERQ+ASA++F+E+Q A KVSL+KGI
Sbjct: 181 RLENTIIYIKGELDELEREDFFRLKKIQGYKKREMERQMASAKEFSEDQFAGKVSLQKGI 240

Query: 846 SMNAAHNLLNDSMKKDEDIIF 908
           S+NAAHNLL+ +M+KDEDIIF
Sbjct: 241 SLNAAHNLLSAAMEKDEDIIF 261


>ref|XP_002532689.1| ATP synthase subunit d, putative [Ricinus communis]
           gi|223527572|gb|EEF29689.1| ATP synthase subunit d,
           putative [Ricinus communis]
          Length = 261

 Score =  451 bits (1159), Expect = e-124
 Identities = 232/261 (88%), Positives = 249/261 (95%)
 Frame = +3

Query: 126 MSSQTQRLTVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 305
           MS Q QRL VVPTVTML VVKARL+GATRGHALLKKKSDALTVQFRQILKKIVSTKESMG
Sbjct: 1   MSGQGQRLNVVPTVTMLAVVKARLIGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 306 EIMKTSSFALTEAKYVAGENIKHIVLENVHTATLKVRSRQENVAGVKLPKFEYFTEGETK 485
           EIMK SSFALTEAKYVAGEN+KH+VLENV  A+LKVRSRQENVAGVKLPKFEYFTE +TK
Sbjct: 61  EIMKASSFALTEAKYVAGENVKHVVLENVQNASLKVRSRQENVAGVKLPKFEYFTESDTK 120

Query: 486 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 665
           NDLTGLARGGQQVQ CRAAYVK+IEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQACRAAYVKSIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 666 RLENTISYIKGELDELEREDFFRLKKIQGYKKRELERQLASAQQFAEEQVAEKVSLKKGI 845
           RLENTISYIKGELDELEREDFFRLKKIQGYKKRE+ERQLA+A+QFAEEQ AEK+SL+KGI
Sbjct: 181 RLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQLAAAKQFAEEQFAEKISLQKGI 240

Query: 846 SMNAAHNLLNDSMKKDEDIIF 908
           S+ +AHN+L+ +M+KDEDIIF
Sbjct: 241 SLKSAHNMLSAAMEKDEDIIF 261


>ref|XP_004140139.1| PREDICTED: V-type proton ATPase subunit D-like [Cucumis sativus]
           gi|449481088|ref|XP_004156078.1| PREDICTED: V-type
           proton ATPase subunit D-like [Cucumis sativus]
          Length = 261

 Score =  440 bits (1132), Expect = e-121
 Identities = 222/261 (85%), Positives = 250/261 (95%)
 Frame = +3

Query: 126 MSSQTQRLTVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 305
           MS QTQRL VVPTVTMLG +KARLVGATRGHALLKKKSDALTVQFRQILKKIVS KESMG
Sbjct: 1   MSGQTQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSAKESMG 60

Query: 306 EIMKTSSFALTEAKYVAGENIKHIVLENVHTATLKVRSRQENVAGVKLPKFEYFTEGETK 485
           ++MKTS+F+LTEAKYVAG+NIKHIVLENV TA +K+RSRQEN+AGVKLPKFE++++GETK
Sbjct: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQTAAIKIRSRQENIAGVKLPKFEHYSDGETK 120

Query: 486 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 665
           NDLTGLARGGQQ+QLCR AYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 666 RLENTISYIKGELDELEREDFFRLKKIQGYKKRELERQLASAQQFAEEQVAEKVSLKKGI 845
           R+ENTISYIKGELDELEREDFFRLKKIQGYK+RE+ERQ A+A+ FAEEQ+AEKVSL+KG+
Sbjct: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIERQRANAKLFAEEQLAEKVSLQKGV 240

Query: 846 SMNAAHNLLNDSMKKDEDIIF 908
           S+++AHNLL+ + +KDEDIIF
Sbjct: 241 SISSAHNLLSAAAEKDEDIIF 261


>ref|XP_002300100.1| predicted protein [Populus trichocarpa] gi|222847358|gb|EEE84905.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  437 bits (1123), Expect = e-120
 Identities = 231/261 (88%), Positives = 246/261 (94%)
 Frame = +3

Query: 126 MSSQTQRLTVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 305
           MS   QRL VVPTVT+LGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG
Sbjct: 1   MSGSGQRLNVVPTVTVLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 306 EIMKTSSFALTEAKYVAGENIKHIVLENVHTATLKVRSRQENVAGVKLPKFEYFTEGETK 485
           + MK SSFALTEAKYVAGENIKH VLENV TATLKVRSRQENVAGVKLPKF+YF EGETK
Sbjct: 61  DKMKASSFALTEAKYVAGENIKHTVLENVQTATLKVRSRQENVAGVKLPKFDYFHEGETK 120

Query: 486 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 665
           NDLTGLARGGQQVQ CRAAYVKAIEVLVELASLQTSF+TLD AIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQACRAAYVKAIEVLVELASLQTSFMTLDTAIKTTNRRVNALENVVKP 180

Query: 666 RLENTISYIKGELDELEREDFFRLKKIQGYKKRELERQLASAQQFAEEQVAEKVSLKKGI 845
           RLENTI+YIKGELDELEREDFFRLKKIQG+KKRE+ERQLA+A+QFAE QVAEKVSL+KGI
Sbjct: 181 RLENTITYIKGELDELEREDFFRLKKIQGFKKREIERQLAAAKQFAEGQVAEKVSLQKGI 240

Query: 846 SMNAAHNLLNDSMKKDEDIIF 908
           S+N+A N+L+ S +KDEDIIF
Sbjct: 241 SLNSAQNMLSAS-EKDEDIIF 260


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