BLASTX nr result

ID: Coptis21_contig00012121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012121
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280416.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297...   264   6e-69
ref|XP_002299828.1| predicted protein [Populus trichocarpa] gi|2...   255   2e-66
ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|2235...   248   3e-64
ref|XP_003551299.1| PREDICTED: laccase-4-like [Glycine max]           248   4e-64
ref|XP_003544873.1| PREDICTED: laccase-4-like [Glycine max]           242   2e-62

>ref|XP_002280416.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297745946|emb|CBI16002.3|
           unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  264 bits (674), Expect = 6e-69
 Identities = 124/162 (76%), Positives = 140/162 (86%)
 Frame = +3

Query: 3   TVQYSGTLASSPTTLINPPPQNATPVATNFTDSLRSLNSKLYPANVPLTADHSLLFTISL 182
           TVQYSGTL+S+PTT+ NPPPQNAT VAT FTDSLRSLNSK YPA VPL  DHSLLFT+ L
Sbjct: 300 TVQYSGTLSSTPTTITNPPPQNATSVATKFTDSLRSLNSKKYPARVPLATDHSLLFTVGL 359

Query: 183 GINPCPTCPSGNRAVADINNVTFVMPTTSLLQAHFFNLSGVFTDDFPGNPPVAFNYTAGG 362
           GINPC TC +G + VA+INNVTFVMPTT+LLQAH+F + GV+TDDFPGNPP+AFNYT  G
Sbjct: 360 GINPCATCVNGGKVVANINNVTFVMPTTALLQAHYFKMKGVYTDDFPGNPPIAFNYT--G 417

Query: 363 TPLNNLHTMNGTRLYRLAYNSTVQVVLQDTGLLAPENHPIHL 488
           T   N  TMNGTRLYRLAYNSTVQ+VLQDTG++APE HP+HL
Sbjct: 418 TQPTNFQTMNGTRLYRLAYNSTVQLVLQDTGMIAPERHPVHL 459


>ref|XP_002299828.1| predicted protein [Populus trichocarpa] gi|222847086|gb|EEE84633.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score =  255 bits (652), Expect = 2e-66
 Identities = 123/162 (75%), Positives = 135/162 (83%)
 Frame = +3

Query: 3   TVQYSGTLASSPTTLINPPPQNATPVATNFTDSLRSLNSKLYPANVPLTADHSLLFTISL 182
           T+ YSGTLAS+ TTL  PP QNATPVATNFTD+LRSLNS  YPA VPL  DHSL FTI L
Sbjct: 300 TLHYSGTLASTTTTLTVPPAQNATPVATNFTDALRSLNSIKYPARVPLKIDHSLFFTIGL 359

Query: 183 GINPCPTCPSGNRAVADINNVTFVMPTTSLLQAHFFNLSGVFTDDFPGNPPVAFNYTAGG 362
           G+NPC TC +GNR VADINNVTFVMPT +LLQAHFFN+ GVFTDDFPGNPP  FNYT  G
Sbjct: 360 GVNPCATCVNGNRVVADINNVTFVMPTIALLQAHFFNIKGVFTDDFPGNPPTPFNYT--G 417

Query: 363 TPLNNLHTMNGTRLYRLAYNSTVQVVLQDTGLLAPENHPIHL 488
           T   N  T+NGT+LYRLAYNSTVQ+VLQDTG+L PENHP+HL
Sbjct: 418 TQPKNFQTVNGTKLYRLAYNSTVQLVLQDTGMLTPENHPVHL 459


>ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|223540267|gb|EEF41838.1|
           laccase, putative [Ricinus communis]
          Length = 556

 Score =  248 bits (634), Expect = 3e-64
 Identities = 119/162 (73%), Positives = 135/162 (83%)
 Frame = +3

Query: 3   TVQYSGTLASSPTTLINPPPQNATPVATNFTDSLRSLNSKLYPANVPLTADHSLLFTISL 182
           T+ YSGTL+SS TTL   PP+NAT +A+NFT++LRSLNSK YPANVPL  DHSL FTI L
Sbjct: 302 TLHYSGTLSSSATTLTATPPKNATSIASNFTNALRSLNSKKYPANVPLKIDHSLFFTIGL 361

Query: 183 GINPCPTCPSGNRAVADINNVTFVMPTTSLLQAHFFNLSGVFTDDFPGNPPVAFNYTAGG 362
           G+NPC TC +G+R VADINNVTFVMPT  LLQAHFFN+SGVFTDDFP NPPV++NYT  G
Sbjct: 362 GVNPCATCVNGSRVVADINNVTFVMPTIGLLQAHFFNISGVFTDDFPSNPPVSYNYT--G 419

Query: 363 TPLNNLHTMNGTRLYRLAYNSTVQVVLQDTGLLAPENHPIHL 488
           T   N  T  GTRLYRLAYNSTVQ+VLQDTG++ PENHPIHL
Sbjct: 420 TQPTNFQTTTGTRLYRLAYNSTVQLVLQDTGMITPENHPIHL 461


>ref|XP_003551299.1| PREDICTED: laccase-4-like [Glycine max]
          Length = 556

 Score =  248 bits (633), Expect = 4e-64
 Identities = 119/162 (73%), Positives = 137/162 (84%)
 Frame = +3

Query: 3   TVQYSGTLASSPTTLINPPPQNATPVATNFTDSLRSLNSKLYPANVPLTADHSLLFTISL 182
           T+ YSGTL S+ TTL + PP+NATP+AT+FTDSLRSLNSK YPA VPL  DH+LLFT+SL
Sbjct: 302 TLHYSGTLGSTITTLTSMPPKNATPLATSFTDSLRSLNSKKYPARVPLKIDHNLLFTVSL 361

Query: 183 GINPCPTCPSGNRAVADINNVTFVMPTTSLLQAHFFNLSGVFTDDFPGNPPVAFNYTAGG 362
           GINPC TC + +R VADINNVTFVMP  SLLQAHFF + GVFTDDFPGNPPV +N+T  G
Sbjct: 362 GINPCATCVNNSRVVADINNVTFVMPKISLLQAHFFKIKGVFTDDFPGNPPVVYNFT--G 419

Query: 363 TPLNNLHTMNGTRLYRLAYNSTVQVVLQDTGLLAPENHPIHL 488
           T  +NL TM GTR+YRLAYNSTVQ+VLQDTG++ PENHPIHL
Sbjct: 420 TQPSNLRTMKGTRVYRLAYNSTVQLVLQDTGMITPENHPIHL 461


>ref|XP_003544873.1| PREDICTED: laccase-4-like [Glycine max]
          Length = 554

 Score =  242 bits (618), Expect = 2e-62
 Identities = 115/162 (70%), Positives = 134/162 (82%)
 Frame = +3

Query: 3   TVQYSGTLASSPTTLINPPPQNATPVATNFTDSLRSLNSKLYPANVPLTADHSLLFTISL 182
           T+ Y+G+L S+ TTL + PP+NATPVATNFTDSLRSLNSK YPA VP   DHSL FT+SL
Sbjct: 299 TLHYTGSLGSTITTLTSLPPKNATPVATNFTDSLRSLNSKKYPARVPQKVDHSLFFTVSL 358

Query: 183 GINPCPTCPSGNRAVADINNVTFVMPTTSLLQAHFFNLSGVFTDDFPGNPPVAFNYTAGG 362
           G+NPCPTC +G++ VA INNVTFVMP  SLLQAHFFN+SGVFTDDFPG PPV +++T   
Sbjct: 359 GVNPCPTCANGSKVVAAINNVTFVMPKVSLLQAHFFNISGVFTDDFPGKPPVVYDFTGTQ 418

Query: 363 TPLNNLHTMNGTRLYRLAYNSTVQVVLQDTGLLAPENHPIHL 488
            P  NL T  GTR+YRLAYNSTVQ+VLQDTG++ PENHPIHL
Sbjct: 419 QP-TNLRTNRGTRVYRLAYNSTVQLVLQDTGMITPENHPIHL 459


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