BLASTX nr result

ID: Coptis21_contig00012112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012112
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269960.2| PREDICTED: BTB/POZ domain-containing protein...    92   4e-17
emb|CBI31167.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002323684.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-15
ref|XP_002882578.1| hypothetical protein ARALYDRAFT_478168 [Arab...    87   2e-15
ref|XP_003623642.1| BTB/POZ domain-containing protein [Medicago ...    86   4e-15

>ref|XP_002269960.2| PREDICTED: BTB/POZ domain-containing protein At3g08570-like isoform
           1 [Vitis vinifera]
          Length = 636

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = +3

Query: 207 LELSFQAHPMLTENECKKLCKFIDCQKLSQEACNHVVKNDRLPVQMAVRVLY 362
           +++  +AHPMLTE+ECKKLCKFIDC+KLSQEACNH  +NDRLPVQM VRVLY
Sbjct: 458 VDIYLKAHPMLTEHECKKLCKFIDCKKLSQEACNHAAQNDRLPVQMTVRVLY 509


>emb|CBI31167.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = +3

Query: 207 LELSFQAHPMLTENECKKLCKFIDCQKLSQEACNHVVKNDRLPVQMAVRVLY 362
           +++  +AHPMLTE+ECKKLCKFIDC+KLSQEACNH  +NDRLPVQM VRVLY
Sbjct: 424 VDIYLKAHPMLTEHECKKLCKFIDCKKLSQEACNHAAQNDRLPVQMTVRVLY 475


>ref|XP_002323684.1| predicted protein [Populus trichocarpa] gi|222868314|gb|EEF05445.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 37/52 (71%), Positives = 46/52 (88%)
 Frame = +3

Query: 207 LELSFQAHPMLTENECKKLCKFIDCQKLSQEACNHVVKNDRLPVQMAVRVLY 362
           +++  +AHP+L+E+ECKKLCK IDCQKLSQEACNH  +NDRLPVQM V+VLY
Sbjct: 402 IDIYLKAHPLLSEHECKKLCKLIDCQKLSQEACNHAAQNDRLPVQMTVQVLY 453



 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +1

Query: 19  SFACRLELERRIGFRLEMVSLDDLLIPSLRA 111
           + ACRLELERRI FRLEMVSLDDLLIPS+R+
Sbjct: 281 AIACRLELERRIAFRLEMVSLDDLLIPSVRS 311


>ref|XP_002882578.1| hypothetical protein ARALYDRAFT_478168 [Arabidopsis lyrata subsp.
           lyrata] gi|297328418|gb|EFH58837.1| hypothetical protein
           ARALYDRAFT_478168 [Arabidopsis lyrata subsp. lyrata]
          Length = 606

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 38/52 (73%), Positives = 45/52 (86%)
 Frame = +3

Query: 207 LELSFQAHPMLTENECKKLCKFIDCQKLSQEACNHVVKNDRLPVQMAVRVLY 362
           +++  +AHP+LTE ECKKLCKFIDC+KLSQEA NHV +NDRLPV M VRVLY
Sbjct: 409 IDMYLKAHPLLTEEECKKLCKFIDCKKLSQEASNHVAQNDRLPVHMVVRVLY 460


>ref|XP_003623642.1| BTB/POZ domain-containing protein [Medicago truncatula]
           gi|355498657|gb|AES79860.1| BTB/POZ domain-containing
           protein [Medicago truncatula]
          Length = 704

 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 37/52 (71%), Positives = 44/52 (84%)
 Frame = +3

Query: 207 LELSFQAHPMLTENECKKLCKFIDCQKLSQEACNHVVKNDRLPVQMAVRVLY 362
           +++  +AH  LTE ECKKLCKFIDCQKLSQEACNH  +NDRLP+QM V+VLY
Sbjct: 496 IDIYLKAHTALTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPLQMVVQVLY 547


Top