BLASTX nr result

ID: Coptis21_contig00012109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012109
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15004.3| unnamed protein product [Vitis vinifera]              390   e-106
ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257...   390   e-106
ref|XP_002511375.1| conserved hypothetical protein [Ricinus comm...   377   e-102
ref|XP_002322173.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
ref|XP_002318079.1| predicted protein [Populus trichocarpa] gi|2...   369   e-100

>emb|CBI15004.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  390 bits (1001), Expect = e-106
 Identities = 209/340 (61%), Positives = 245/340 (72%), Gaps = 15/340 (4%)
 Frame = +1

Query: 46   GFNSSTLLISGGHLQR------------FLEMSRSIYMVHIRATDTIVSVNVPENITRDV 189
            GFNSS + ISGG LQR            F  +SRSIY   I+A   +VSVNVPENIT DV
Sbjct: 707  GFNSSHISISGGQLQRQVISCSQTQAYIFNAISRSIYTAEIKADHDVVSVNVPENITGDV 766

Query: 190  AGNKNLASNILQVRHYTIPVISYVLSIFTTAAFTVTSLVAGLLTISTASLQSTGVLSRPS 369
            AGN+NLASNILQVRHY++P+ S V+S FTTA+F  TSL AG LT+STASLQS G   RP 
Sbjct: 767  AGNQNLASNILQVRHYSVPITSCVISTFTTASFVATSLAAGWLTVSTASLQSVGAFLRPR 826

Query: 370  S-LTIDPARNLFRIACHVQVFALSRWLTVALPLEYYEFARGLQWSIPYLSLPWETGHLHS 546
            S L  DPARNLFRIA H+QVFALSRWL V LP+EYYEFARG+QWSIPY SLPWETGH+H 
Sbjct: 827  SYLVSDPARNLFRIASHIQVFALSRWLPVTLPVEYYEFARGIQWSIPYFSLPWETGHIHP 886

Query: 547  FMGDSIPSSMSQSEIYSRA--QSKSFRSENLEHRNSEMVTSVFGLPLTPMEYRSFFESHN 720
             M  S  SS + S +Y+     S  F +   E  N +   SV+GLPLTPMEYR+FFE+HN
Sbjct: 887  IMVGS--SSPTLSHLYASRIHDSGFFETVQPEEDNLDRAASVYGLPLTPMEYRTFFENHN 944

Query: 721  IKPEAERILGRQNSDGWEEFSRNMFWLAVIGGSXXXXXXXXXXXXRCRRKSSEEQNSHGA 900
             KPEAE I   QNS+G  +F+R+MFWLAVIGGS            + R+KSSE+Q S+GA
Sbjct: 945  FKPEAEYISDPQNSNGRRDFNRSMFWLAVIGGSLILLHALLVLVLKIRKKSSEKQGSYGA 1004

Query: 901  LVLPRFEIFLVILALPSLCQASMALVKGGRTSAVIVGILL 1020
            LV PRFEIFL+IL LP +C+AS +LVKGG TSAV+VGILL
Sbjct: 1005 LVFPRFEIFLIILVLPCICEASASLVKGGTTSAVVVGILL 1044


>ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257111 [Vitis vinifera]
          Length = 1087

 Score =  390 bits (1001), Expect = e-106
 Identities = 208/334 (62%), Positives = 244/334 (73%), Gaps = 9/334 (2%)
 Frame = +1

Query: 46   GFNSSTLLISGGHLQRFLEMSRSIYMVHIRATDTIVSVNVPENITRDVAGNKNLASNILQ 225
            GFNSS + ISGG LQ F  +SRSIY   I+A   +VSVNVPENIT DVAGN+NLASNILQ
Sbjct: 362  GFNSSHISISGGQLQSFNAISRSIYTAEIKADHDVVSVNVPENITGDVAGNQNLASNILQ 421

Query: 226  VRHYTIPVISYVLSIFTTAAFTVTSLVAGLLTISTASLQSTGVLSRPSS-LTIDPARNLF 402
            VRHY++P+ S V+S FTTA+F  TSL AG LT+STASLQS G   RP S L  DPARNLF
Sbjct: 422  VRHYSVPITSCVISTFTTASFVATSLAAGWLTVSTASLQSVGAFLRPRSYLVSDPARNLF 481

Query: 403  RIACHVQVFALSRWLTVALPLEYYEFARGLQWSIPYLSLPWETGHLHSFMGDSIPSSMSQ 582
            RIA H+QVFALSRWL V LP+EYYEFARG+QWSIPY SLPWETGH+H  M  S  SS + 
Sbjct: 482  RIASHIQVFALSRWLPVTLPVEYYEFARGIQWSIPYFSLPWETGHIHPIMVGS--SSPTL 539

Query: 583  SEIYSRA--QSKSFRSENLEHRNSEMVTSVFGLPLTPMEYRSFFESHNIKPEAERILGRQ 756
            S +Y+     S  F +   E  N +   SV+GLPLTPMEYR+FFE+HN KPEAE I   Q
Sbjct: 540  SHLYASRIHDSGFFETVQPEEDNLDRAASVYGLPLTPMEYRTFFENHNFKPEAEYISDPQ 599

Query: 757  NSDGWEEFSRNMFWLAVIGGSXXXXXXXXXXXXRCRRKSSEEQNSHGALVLPRFEIFLVI 936
            NS+G  +F+R+MFWLAVIGGS            + R+KSSE+Q S+GALV PRFEIFL+I
Sbjct: 600  NSNGRRDFNRSMFWLAVIGGSLILLHALLVLVLKIRKKSSEKQGSYGALVFPRFEIFLII 659

Query: 937  LALPSLCQASMALVK------GGRTSAVIVGILL 1020
            L LP +C+AS +LVK      GG TSAV+VGILL
Sbjct: 660  LVLPCICEASASLVKGTFMVQGGTTSAVVVGILL 693


>ref|XP_002511375.1| conserved hypothetical protein [Ricinus communis]
            gi|223550490|gb|EEF51977.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1087

 Score =  377 bits (969), Expect = e-102
 Identities = 199/328 (60%), Positives = 238/328 (72%), Gaps = 2/328 (0%)
 Frame = +1

Query: 46   GFNSSTLLISGGHLQRFLEMSRSIYMVHIRATDTIVSVNVPENITRDVAGNKNLASNILQ 225
            GFNSS+L ISGGHLQ F E+SRS Y+  I A   I+SVNVPEN+T DVAGN NL SNILQ
Sbjct: 379  GFNSSSLSISGGHLQSFHEISRSKYIAQIHADGDIISVNVPENVTGDVAGNNNLPSNILQ 438

Query: 226  VRHYTIPVISYVLSIFTTAAFTVTSLVAGLLTISTASLQSTGVLSRPSSL-TIDPARNLF 402
            VRHY++P IS V+S   TA F    L +GLLT+STASLQS G  SR +SL T DP R L 
Sbjct: 439  VRHYSVPTISSVISGIATAVFLAACLASGLLTVSTASLQSVGAFSRSTSLLTSDPTRILV 498

Query: 403  RIACHVQVFALSRWLTVALPLEYYEFARGLQWSIPYLSLPWETGHLHSFMGDSIPSSMSQ 582
            RIAC++QVFALSRWL V LP+EYYEFARGLQWSIPY SLPWETG +H  M  S  S+ S 
Sbjct: 499  RIACYIQVFALSRWLAVTLPVEYYEFARGLQWSIPYFSLPWETGGIHPIMLGSNSSTASH 558

Query: 583  SEIYSRAQSKSFRSENLEHRNSEMVTSVFGLPLTPMEYRSFFESHNIKPEAERILGRQNS 762
            S I     S+   S  LE  +S++ ++V+GLPLTPMEYRSFFES N+KPEAE I   Q S
Sbjct: 559  SYISYIHDSEESPSAQLEEVHSDIASAVYGLPLTPMEYRSFFESQNMKPEAEYIYDPQYS 618

Query: 763  DGWEEFSRNMFWLAVIGGSXXXXXXXXXXXXRCRRKSSEEQ-NSHGALVLPRFEIFLVIL 939
            +GW  F R+MFWLA++GGS            + R+KSSE+Q  ++GAL+LPRFEIFL+IL
Sbjct: 619  NGWRVFERSMFWLAIVGGSFLLLHALLLFILKYRKKSSEKQRGAYGALILPRFEIFLIIL 678

Query: 940  ALPSLCQASMALVKGGRTSAVIVGILLL 1023
            ALP + +AS ALV+GG  S  +VGILLL
Sbjct: 679  ALPCISEASAALVRGGTPSGTVVGILLL 706


>ref|XP_002322173.1| predicted protein [Populus trichocarpa] gi|222869169|gb|EEF06300.1|
            predicted protein [Populus trichocarpa]
          Length = 937

 Score =  376 bits (966), Expect = e-102
 Identities = 197/327 (60%), Positives = 238/327 (72%), Gaps = 1/327 (0%)
 Frame = +1

Query: 46   GFNSSTLLISGGHLQRFLEMSRSIYMVHIRATDTIVSVNVPENITRDVAGNKNLASNILQ 225
            GFNSS L ISGGHLQ F E+SRS Y+  I+A D I+SV++P+N+  DVAGNKNLASNILQ
Sbjct: 235  GFNSSFLSISGGHLQGFHEISRSKYIAEIKADDDILSVSIPQNVIGDVAGNKNLASNILQ 294

Query: 226  VRHYTIPVISYVLSIFTTAAFTVTSLVAGLLTISTASLQSTGVLSRPSSL-TIDPARNLF 402
            VRHY++P IS V+S F TA F  TSL AGLLT+STASL S G  SRPSSL T +P RN+F
Sbjct: 295  VRHYSVPTISSVISAFATACFLATSLAAGLLTLSTASLLSAGAFSRPSSLLTAEPTRNIF 354

Query: 403  RIACHVQVFALSRWLTVALPLEYYEFARGLQWSIPYLSLPWETGHLHSFMGDSIPSSMSQ 582
            R ACH+QVFA+SRWL V LP+EYYEFAR LQWSIPY SLPWETG +   M  S  SS + 
Sbjct: 355  RTACHIQVFAMSRWLAVTLPVEYYEFARNLQWSIPYFSLPWETGDIQPIMVKSNSSSGAH 414

Query: 583  SEIYSRAQSKSFRSENLEHRNSEMVTSVFGLPLTPMEYRSFFESHNIKPEAERILGRQNS 762
            S I S+    S  S  L+ ++    + V+GLPL+PMEY SFFES + KPEAE +L  Q+S
Sbjct: 415  SYI-SKTHDISL-SMQLKGKSVNKSSPVYGLPLSPMEYLSFFESQSFKPEAEHVLDPQHS 472

Query: 763  DGWEEFSRNMFWLAVIGGSXXXXXXXXXXXXRCRRKSSEEQNSHGALVLPRFEIFLVILA 942
            +GW +F R+MFWLAVIGGS            + R+ ++E+Q  +GAL LPRFEIFL  LA
Sbjct: 473  NGWRDFDRSMFWLAVIGGSMILLHAILLFILKLRKGNTEKQRDYGALTLPRFEIFLTFLA 532

Query: 943  LPSLCQASMALVKGGRTSAVIVGILLL 1023
            LP +C AS ALV+GG TS +IVGILLL
Sbjct: 533  LPCICVASAALVRGGTTSGIIVGILLL 559


>ref|XP_002318079.1| predicted protein [Populus trichocarpa] gi|222858752|gb|EEE96299.1|
            predicted protein [Populus trichocarpa]
          Length = 1083

 Score =  369 bits (946), Expect = e-100
 Identities = 191/327 (58%), Positives = 236/327 (72%), Gaps = 1/327 (0%)
 Frame = +1

Query: 46   GFNSSTLLISGGHLQRFLEMSRSIYMVHIRATDTIVSVNVPENITRDVAGNKNLASNILQ 225
            GFNSS L I GGHLQ F E+SRS Y+  ++A D +VSV+VP+N+T DVAGNKNL SNILQ
Sbjct: 379  GFNSSFLSIGGGHLQGFHEISRSKYIAEVKADDDVVSVSVPQNVTGDVAGNKNLGSNILQ 438

Query: 226  VRHYTIPVISYVLSIFTTAAFTVTSLVAGLLTISTASLQSTGVLSRPSSL-TIDPARNLF 402
            VR +++P+IS V+S F TA F  TSL AGLLT+STASL S G  SRPS L T +P RNLF
Sbjct: 439  VRRHSVPMISSVISAFATACFLATSLAAGLLTLSTASLLSAGAFSRPSPLLTAEPTRNLF 498

Query: 403  RIACHVQVFALSRWLTVALPLEYYEFARGLQWSIPYLSLPWETGHLHSFMGDSIPSSMSQ 582
            R ACH+QVFALSRWL V LP+EYYEFA+GLQWSIPY  LPWETG +H  M  S   S+  
Sbjct: 499  RSACHIQVFALSRWLAVTLPIEYYEFAKGLQWSIPYFILPWETGGVHPIMVKSNSFSILN 558

Query: 583  SEIYSRAQSKSFRSENLEHRNSEMVTSVFGLPLTPMEYRSFFESHNIKPEAERILGRQNS 762
            S I S+    S ++  LE ++    + VFGLPL PMEY SFFES N KPEAE I+  Q+S
Sbjct: 559  SYI-SKTHDIS-QNMQLEGKSGNKSSPVFGLPLAPMEYISFFESQNFKPEAEHIIDPQHS 616

Query: 763  DGWEEFSRNMFWLAVIGGSXXXXXXXXXXXXRCRRKSSEEQNSHGALVLPRFEIFLVILA 942
            +GW +F R+MFWLAVIG S            + R++++++Q  +GAL  PRFEIFL +LA
Sbjct: 617  NGWRDFDRSMFWLAVIGVSLVLLHVILLFIIKLRKRTADKQRDYGALTFPRFEIFLTVLA 676

Query: 943  LPSLCQASMALVKGGRTSAVIVGILLL 1023
            LP +C+AS +LV+GG  S +IVGILLL
Sbjct: 677  LPCICKASASLVRGGTASGIIVGILLL 703


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