BLASTX nr result

ID: Coptis21_contig00012099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012099
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238707.1| inducer of CBF expression 4 [Glycine max] gi...    90   2e-25
gb|ADV36254.1| ICEd [Glycine max]                                      90   2e-25
emb|CAN67898.1| hypothetical protein VITISV_040396 [Vitis vinifera]    86   6e-25
ref|XP_002284528.1| PREDICTED: transcription factor ICE1-like [V...    86   6e-25
emb|CBI15748.3| unnamed protein product [Vitis vinifera]               86   6e-25

>ref|NP_001238707.1| inducer of CBF expression 4 [Glycine max]
           gi|213053818|gb|ACJ39214.1| inducer of CBF expression 4
           [Glycine max]
          Length = 462

 Score = 90.1 bits (222), Expect(2) = 2e-25
 Identities = 55/102 (53%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
 Frame = -2

Query: 478 EDEDDLSMDGDGSGFIFYSNEGM--GNDNNTVEVNSKNGGGSSLNANSTITXXXXXXXXX 305
           E+ +DLS DG G   + Y ++ +   N NN  E N+   GG S NANST+          
Sbjct: 213 EEVEDLSFDGSG---LNYDSDDLTESNYNNVSEGNTGKNGGVSSNANSTVITGLDQKGKK 269

Query: 304 XGPPAMNLMAERRGRKKLNDRLYMLWSVVPKIIKMDGASMLG 179
            G PA NLMAERR RKKLNDRLYML SVVPKI KMD AS+LG
Sbjct: 270 KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILG 311



 Score = 52.4 bits (124), Expect(2) = 2e-25
 Identities = 27/49 (55%), Positives = 30/49 (61%)
 Frame = -1

Query: 179 DVIEYLKEPLQRINDLHNXXXXXXXXXXXXXXXSFNPLTLTPPTVPCRV 33
           D IEYLKE LQRINDLHN               SF+PLT TPPT+P R+
Sbjct: 312 DAIEYLKELLQRINDLHNELESTPVGSSLTPVSSFHPLTPTPPTLPSRI 360


>gb|ADV36254.1| ICEd [Glycine max]
          Length = 426

 Score = 90.1 bits (222), Expect(2) = 2e-25
 Identities = 55/102 (53%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
 Frame = -2

Query: 478 EDEDDLSMDGDGSGFIFYSNEGM--GNDNNTVEVNSKNGGGSSLNANSTITXXXXXXXXX 305
           E+ +DLS DG G   + Y ++ +   N NN  E N+   GG S NANST+          
Sbjct: 177 EEVEDLSFDGSG---LNYDSDDLTESNYNNVSEGNTGKNGGVSSNANSTVITGLDQKGKK 233

Query: 304 XGPPAMNLMAERRGRKKLNDRLYMLWSVVPKIIKMDGASMLG 179
            G PA NLMAERR RKKLNDRLYML SVVPKI KMD AS+LG
Sbjct: 234 KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILG 275



 Score = 52.4 bits (124), Expect(2) = 2e-25
 Identities = 27/49 (55%), Positives = 30/49 (61%)
 Frame = -1

Query: 179 DVIEYLKEPLQRINDLHNXXXXXXXXXXXXXXXSFNPLTLTPPTVPCRV 33
           D IEYLKE LQRINDLHN               SF+PLT TPPT+P R+
Sbjct: 276 DAIEYLKELLQRINDLHNELESTPVGSSLTPVSSFHPLTPTPPTLPSRI 324


>emb|CAN67898.1| hypothetical protein VITISV_040396 [Vitis vinifera]
          Length = 585

 Score = 86.3 bits (212), Expect(2) = 6e-25
 Identities = 54/100 (54%), Positives = 65/100 (65%)
 Frame = -2

Query: 478 EDEDDLSMDGDGSGFIFYSNEGMGNDNNTVEVNSKNGGGSSLNANSTITXXXXXXXXXXG 299
           ED +D S+D  G   + Y ++ +  +NN +E N KN G +S NANST+T           
Sbjct: 306 EDIEDASIDASG---LNYDSDEL-TENNKMEENGKNSGNNS-NANSTVTGGDHKGKKKGL 360

Query: 298 PPAMNLMAERRGRKKLNDRLYMLWSVVPKIIKMDGASMLG 179
           P A NLMAERR RKKLNDRLYML SVVPKI KMD AS+LG
Sbjct: 361 P-AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILG 399



 Score = 54.3 bits (129), Expect(2) = 6e-25
 Identities = 27/49 (55%), Positives = 31/49 (63%)
 Frame = -1

Query: 179 DVIEYLKEPLQRINDLHNXXXXXXXXXXXXXXXSFNPLTLTPPTVPCRV 33
           D IEYLKE LQRIN+LHN               SF+PLT TPPT+PCR+
Sbjct: 400 DAIEYLKELLQRINNLHNELESTPPGSSLTPTTSFHPLTPTPPTLPCRI 448


>ref|XP_002284528.1| PREDICTED: transcription factor ICE1-like [Vitis vinifera]
          Length = 550

 Score = 86.3 bits (212), Expect(2) = 6e-25
 Identities = 54/100 (54%), Positives = 65/100 (65%)
 Frame = -2

Query: 478 EDEDDLSMDGDGSGFIFYSNEGMGNDNNTVEVNSKNGGGSSLNANSTITXXXXXXXXXXG 299
           ED +D S+D  G   + Y ++ +  +NN +E N KN G +S NANST+T           
Sbjct: 306 EDIEDASIDASG---LNYDSDEL-TENNKMEENGKNSGNNS-NANSTVTGGDHKGKKKGL 360

Query: 298 PPAMNLMAERRGRKKLNDRLYMLWSVVPKIIKMDGASMLG 179
           P A NLMAERR RKKLNDRLYML SVVPKI KMD AS+LG
Sbjct: 361 P-AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILG 399



 Score = 54.3 bits (129), Expect(2) = 6e-25
 Identities = 27/49 (55%), Positives = 31/49 (63%)
 Frame = -1

Query: 179 DVIEYLKEPLQRINDLHNXXXXXXXXXXXXXXXSFNPLTLTPPTVPCRV 33
           D IEYLKE LQRIN+LHN               SF+PLT TPPT+PCR+
Sbjct: 400 DAIEYLKELLQRINNLHNELESTPPGSSLTPTTSFHPLTPTPPTLPCRI 448


>emb|CBI15748.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score = 86.3 bits (212), Expect(2) = 6e-25
 Identities = 54/100 (54%), Positives = 65/100 (65%)
 Frame = -2

Query: 478 EDEDDLSMDGDGSGFIFYSNEGMGNDNNTVEVNSKNGGGSSLNANSTITXXXXXXXXXXG 299
           ED +D S+D  G   + Y ++ +  +NN +E N KN G +S NANST+T           
Sbjct: 241 EDIEDASIDASG---LNYDSDEL-TENNKMEENGKNSGNNS-NANSTVTGGDHKGKKKGL 295

Query: 298 PPAMNLMAERRGRKKLNDRLYMLWSVVPKIIKMDGASMLG 179
           P A NLMAERR RKKLNDRLYML SVVPKI KMD AS+LG
Sbjct: 296 P-AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILG 334



 Score = 54.3 bits (129), Expect(2) = 6e-25
 Identities = 27/49 (55%), Positives = 31/49 (63%)
 Frame = -1

Query: 179 DVIEYLKEPLQRINDLHNXXXXXXXXXXXXXXXSFNPLTLTPPTVPCRV 33
           D IEYLKE LQRIN+LHN               SF+PLT TPPT+PCR+
Sbjct: 335 DAIEYLKELLQRINNLHNELESTPPGSSLTPTTSFHPLTPTPPTLPCRI 383


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