BLASTX nr result

ID: Coptis21_contig00012098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012098
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280184.1| PREDICTED: uncharacterized protein LOC100252...   155   8e-36
ref|XP_002521719.1| conserved hypothetical protein [Ricinus comm...   154   2e-35
ref|XP_002307214.1| predicted protein [Populus trichocarpa] gi|2...   141   2e-31
ref|NP_567498.1| uncharacterized protein [Arabidopsis thaliana] ...   140   2e-31
ref|XP_002868132.1| hypothetical protein ARALYDRAFT_493236 [Arab...   139   6e-31

>ref|XP_002280184.1| PREDICTED: uncharacterized protein LOC100252414 [Vitis vinifera]
           gi|296088655|emb|CBI37646.3| unnamed protein product
           [Vitis vinifera]
          Length = 176

 Score =  155 bits (392), Expect = 8e-36
 Identities = 78/141 (55%), Positives = 100/141 (70%)
 Frame = -2

Query: 588 KKRRSSSTEQNQLREQIKELVREAESLSNPSTFXXXXXXXXXXXXXXXELLKSQEMHSKE 409
           KKR   S E ++LR +IK+L++EA + S PSTF               ELLK+QE  ++E
Sbjct: 34  KKRGLRSAEDDKLRGEIKQLLKEASAFSQPSTFAQAAKLRRMAAAKEKELLKNQESLNRE 93

Query: 408 YKLSYDAYFKALTVLKVVTHLMLVVWFWGDPVAAVSKQLLQPFGKVLSWRAGDLDNDHIM 229
            K SYD+Y KAL  LKV  + +LV W+W  PVAA+SKQL+QPFGKVLSWR+G   ND++M
Sbjct: 94  KKSSYDSYLKALLFLKVFFYFVLVCWYWSSPVAAISKQLVQPFGKVLSWRSGVSSNDNVM 153

Query: 228 VGIIPWLIVSNRVSKFICQKL 166
           VGIIPWLI+S RVSKFIC+K+
Sbjct: 154 VGIIPWLILSTRVSKFICRKV 174


>ref|XP_002521719.1| conserved hypothetical protein [Ricinus communis]
           gi|223539110|gb|EEF40706.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 180

 Score =  154 bits (388), Expect = 2e-35
 Identities = 73/141 (51%), Positives = 101/141 (71%)
 Frame = -2

Query: 594 RLKKRRSSSTEQNQLREQIKELVREAESLSNPSTFXXXXXXXXXXXXXXXELLKSQEMHS 415
           +LKKR + ++ + QLR +IK+L++EA S S PSTF               EL   QEMH+
Sbjct: 37  QLKKRAAKTSTEVQLRTEIKQLLKEASSYSQPSTFAQAAKLRRLAAAKEKELANLQEMHN 96

Query: 414 KEYKLSYDAYFKALTVLKVVTHLMLVVWFWGDPVAAVSKQLLQPFGKVLSWRAGDLDNDH 235
           KE KLSYD Y K + + K+VT+ +++ WFW  PVAA+S+QL+QPFG++LSW AG L ND+
Sbjct: 97  KEMKLSYDLYLKIIFLSKIVTYFVMICWFWRTPVAAISQQLVQPFGRMLSWGAGGLFNDN 156

Query: 234 IMVGIIPWLIVSNRVSKFICQ 172
           ++VGIIPWLI+S RVSKF+C+
Sbjct: 157 VLVGIIPWLILSTRVSKFVCR 177


>ref|XP_002307214.1| predicted protein [Populus trichocarpa] gi|222856663|gb|EEE94210.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score =  141 bits (355), Expect = 2e-31
 Identities = 70/141 (49%), Positives = 96/141 (68%)
 Frame = -2

Query: 594 RLKKRRSSSTEQNQLREQIKELVREAESLSNPSTFXXXXXXXXXXXXXXXELLKSQEMHS 415
           +LKK+ S S  + QLR +IK+L+++A +LS PSTF               EL   +E H 
Sbjct: 37  QLKKKGSKSAAEIQLRAEIKQLLKDASALSQPSTFAQAAKLRRLAAAKEKELANYKEAHD 96

Query: 414 KEYKLSYDAYFKALTVLKVVTHLMLVVWFWGDPVAAVSKQLLQPFGKVLSWRAGDLDNDH 235
           KE K S D+Y K L + KV+T+ +L+ WFW  PVA +S+QL+QPFG+ LSWRAG   N++
Sbjct: 97  KEMKRSSDSYPKILFISKVLTYFVLICWFWRTPVAEISQQLVQPFGRFLSWRAGGRLNNN 156

Query: 234 IMVGIIPWLIVSNRVSKFICQ 172
           +MVGIIPWLI+S RVSKF+C+
Sbjct: 157 VMVGIIPWLILSTRVSKFVCR 177


>ref|NP_567498.1| uncharacterized protein [Arabidopsis thaliana]
           gi|98960933|gb|ABF58950.1| At4g16444 [Arabidopsis
           thaliana] gi|110743059|dbj|BAE99422.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332658350|gb|AEE83750.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 178

 Score =  140 bits (354), Expect = 2e-31
 Identities = 70/141 (49%), Positives = 95/141 (67%)
 Frame = -2

Query: 594 RLKKRRSSSTEQNQLREQIKELVREAESLSNPSTFXXXXXXXXXXXXXXXELLKSQEMHS 415
           +LKK+ S +T +++LR +IK+L+REA +LS P+TF               EL +  E H 
Sbjct: 34  QLKKKGSKNTRESELRTEIKQLLREASALSQPATFAQAAKLRRSAATKEKELAQYLEQHH 93

Query: 414 KEYKLSYDAYFKALTVLKVVTHLMLVVWFWGDPVAAVSKQLLQPFGKVLSWRAGDLDNDH 235
           KE KLSYD Y K L   KVV +L+LV+ FW  P+A ++KQL+QPFG +LSW  G     H
Sbjct: 94  KEIKLSYDMYGKGLLASKVVIYLILVLCFWRTPIAIIAKQLVQPFGTLLSWGTGGHMTGH 153

Query: 234 IMVGIIPWLIVSNRVSKFICQ 172
           +MVGIIPWLI+SNRVSK++C+
Sbjct: 154 VMVGIIPWLILSNRVSKYVCR 174


>ref|XP_002868132.1| hypothetical protein ARALYDRAFT_493236 [Arabidopsis lyrata subsp.
           lyrata] gi|297313968|gb|EFH44391.1| hypothetical protein
           ARALYDRAFT_493236 [Arabidopsis lyrata subsp. lyrata]
          Length = 178

 Score =  139 bits (350), Expect = 6e-31
 Identities = 69/141 (48%), Positives = 95/141 (67%)
 Frame = -2

Query: 594 RLKKRRSSSTEQNQLREQIKELVREAESLSNPSTFXXXXXXXXXXXXXXXELLKSQEMHS 415
           +LKK+ S +T +++LR +IK+L+REA +LS P+TF               EL +  E H+
Sbjct: 34  QLKKKGSKNTRESELRSEIKQLLREASALSQPATFAQAAKLRRSAATKEKELAQYLEQHN 93

Query: 414 KEYKLSYDAYFKALTVLKVVTHLMLVVWFWGDPVAAVSKQLLQPFGKVLSWRAGDLDNDH 235
           KE KLSYD Y K L   KVV +L+LV+ FW  P+A ++KQL+QPFG +LSW  G     H
Sbjct: 94  KEIKLSYDMYGKVLLASKVVIYLILVLCFWRTPIAIIAKQLVQPFGTLLSWGTGGHLTGH 153

Query: 234 IMVGIIPWLIVSNRVSKFICQ 172
           +MVGIIPWLI+S RVSK++C+
Sbjct: 154 VMVGIIPWLILSTRVSKYVCR 174


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