BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012074
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35084.1| unknown [Lotus japonicus]                               94   2e-17
gb|AFK35078.1| unknown [Lotus japonicus]                               94   2e-17
ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinif...    87   4e-15
emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]    87   4e-15
ref|NP_001077493.1| F-box protein SKIP24 [Arabidopsis thaliana] ...    84   2e-14

>gb|AFK35084.1| unknown [Lotus japonicus]
          Length = 257

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 47/111 (42%), Positives = 70/111 (63%)
 Frame = -2

Query: 424 MEVLPEEIWIRILETGIEKWILTHKDICSFSISCKNFNKLSNDNSLWSTLLNLDFPHFQN 245
           M  LPEE+W RILE G+E    T+KD+C  SISC+ F++LS+D+SLW+ LL+ DFP    
Sbjct: 13  MSSLPEELWRRILEIGVESSGFTYKDLCCISISCRRFHRLSSDDSLWNPLLSSDFPSLTP 72

Query: 244 EDTSSSEESQKILYKSRLEIYRQLERDFIRRTVLNQEYRLGVLGRKIKRVR 92
             +SS+  S K LYK R E  ++      +R VL +E ++    RK++ ++
Sbjct: 73  PSSSSTSPSAKSLYKLRFERDKERRIAAHKRVVLRKESQVAEHSRKLRNIQ 123


>gb|AFK35078.1| unknown [Lotus japonicus]
          Length = 257

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 47/111 (42%), Positives = 70/111 (63%)
 Frame = -2

Query: 424 MEVLPEEIWIRILETGIEKWILTHKDICSFSISCKNFNKLSNDNSLWSTLLNLDFPHFQN 245
           M  LPEE+W RILE G+E    T+KD+C  SISC+ F++LS+D+SLW+ LL+ DFP    
Sbjct: 13  MSSLPEELWRRILEIGVESSGFTYKDLCCISISCRRFHRLSSDDSLWNPLLSSDFPSLTP 72

Query: 244 EDTSSSEESQKILYKSRLEIYRQLERDFIRRTVLNQEYRLGVLGRKIKRVR 92
             +SS+  S K LYK R E  ++      +R VL +E ++    RK++ ++
Sbjct: 73  PSSSSTSPSAKSLYKLRFERDKERRIAAHKRVVLRKESQVAEHSRKLRNIQ 123


>ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinifera]
           gi|296085868|emb|CBI31192.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
 Frame = -2

Query: 424 MEVLPEEIWIRILETGIEKWILTHKDICSFSISCKNFNKLSNDNSLWSTLLNLDFPHFQ- 248
           M  LP+E+W +ILE GI    LT+KD+C  SISC+  ++LSND  LWS LL+ DFPH + 
Sbjct: 1   MADLPDEMWRQILEIGIRSSNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFPHTEA 60

Query: 247 ---NEDTSSSEESQKILYKSRLEIYRQLERDFIRRTVLNQEYRLGVLGRKIKRVRRELKV 77
              N   SSS  S K++Y+ + +  R  +    RR VL  E ++    R ++ ++ +L  
Sbjct: 61  SVSNGTVSSSSLSPKLMYRIKFDRERARKAAAHRRAVLRLESQIAGHLRNLQEIQMKLTE 120

Query: 76  INEQME 59
             E+M+
Sbjct: 121 ETEKMK 126


>emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]
          Length = 256

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
 Frame = -2

Query: 424 MEVLPEEIWIRILETGIEKWILTHKDICSFSISCKNFNKLSNDNSLWSTLLNLDFPHFQ- 248
           M  LP+E+W +ILE GI    LT+KD+C  SISC+  ++LSND  LWS LL+ DFPH + 
Sbjct: 1   MADLPDEMWRQILEIGIRSSNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFPHTEA 60

Query: 247 ---NEDTSSSEESQKILYKSRLEIYRQLERDFIRRTVLNQEYRLGVLGRKIKRVRRELKV 77
              N   SSS  S K++Y+ + +  R  +    RR VL  E ++    R ++ ++ +L  
Sbjct: 61  SVSNGTVSSSSLSPKLMYRIKFDRERARKAAAHRRAVLRLESQIAGHLRNLQEIQMKLTE 120

Query: 76  INEQME 59
             E+M+
Sbjct: 121 ETEKMK 126


>ref|NP_001077493.1| F-box protein SKIP24 [Arabidopsis thaliana]
           gi|238055474|sp|Q9CAZ0.2|SKI24_ARATH RecName: Full=F-box
           protein SKIP24; AltName: Full=SKP1-interacting partner
           24 gi|332190217|gb|AEE28338.1| F-box protein SKIP24
           [Arabidopsis thaliana]
          Length = 295

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 44/132 (33%), Positives = 76/132 (57%)
 Frame = -2

Query: 415 LPEEIWIRILETGIEKWILTHKDICSFSISCKNFNKLSNDNSLWSTLLNLDFPHFQNEDT 236
           +P+E+W +ILE G++    ++KD+C  SIS +   +LS D+SLW  LL  DFP+     +
Sbjct: 6   IPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVSAS 65

Query: 235 SSSEESQKILYKSRLEIYRQLERDFIRRTVLNQEYRLGVLGRKIKRVRRELKVINEQMEE 56
           SSSE   K +Y +R E  ++ +    RR +L +E  +   GR+I+ +   L    E+++ 
Sbjct: 66  SSSESPTKFIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERLQS 125

Query: 55  NSGVLLDMIRDR 20
           +S    D+++ R
Sbjct: 126 SSLQFSDLLKVR 137