BLASTX nr result

ID: Coptis21_contig00012037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012037
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64356.1| hypothetical protein VITISV_020633 [Vitis vinifera]    72   6e-11
ref|XP_002321312.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
emb|CAN64438.1| hypothetical protein VITISV_011230 [Vitis vinifera]    65   7e-09
ref|XP_002333289.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002330315.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08

>emb|CAN64356.1| hypothetical protein VITISV_020633 [Vitis vinifera]
          Length = 1852

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/89 (39%), Positives = 54/89 (60%)
 Frame = +3

Query: 3   EIYKPGHKCKTQHLYMLVGTEEDDTIDEAKGEEDHVLQQMETDMEISLHALTGNVGQNTI 182
           E + PGHKC+   L ++ G +E     + K EE  +    E ++E+S+HAL G     T+
Sbjct: 213 ERFTPGHKCQGPRLLLIEGHDEV----QDKEEEAXISDNREDELEVSIHALXGWASPRTM 268

Query: 183 RIQGLLKKRPITILIDTGSTHSFLDSEVA 269
           R+   +K +PI +LID+GSTH+FL  +VA
Sbjct: 269 RVAATIKSQPIMVLIDSGSTHNFLSDKVA 297


>ref|XP_002321312.1| predicted protein [Populus trichocarpa] gi|222862085|gb|EEE99627.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
 Frame = +3

Query: 18  GHKCKTQHLYMLVGTEEDDTIDEAKGEEDHVLQQMETDMEI-----SLHALTGNVGQNTI 182
           G+KC  + L+M+ G +E+D +D    E +++++++  + +I     SL+AL  N   NTI
Sbjct: 224 GYKCGVKGLHMIDGNKEEDFLDV---EAENIIEKLMKNKKIKEYSLSLNALADNYAHNTI 280

Query: 183 RIQGLLKKRPITILIDTGSTHSFLDSEVA 269
           RI+G    R + ILID+GSTH+F+D  +A
Sbjct: 281 RIRGNYHGRELVILIDSGSTHNFIDEHIA 309


>emb|CAN64438.1| hypothetical protein VITISV_011230 [Vitis vinifera]
          Length = 361

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = +3

Query: 18  GHKCKTQHLYMLVGTEEDDTIDEAKGEEDHVLQQMETDMEISLHALTGNVGQNTIRIQGL 197
           GH+CK   L +L G   DD+  + K  E      + +D EISLHALTG     T+R+   
Sbjct: 246 GHRCKGPQLLLLEGNINDDSEGDTKEAE----ADLPSDPEISLHALTGWTATKTMRVTAK 301

Query: 198 LKKRPITILIDTGSTHSFLDSEVA 269
           +    I +LID+GSTH+F+  +VA
Sbjct: 302 IGTHDIVVLIDSGSTHNFISDKVA 325


>ref|XP_002333289.1| predicted protein [Populus trichocarpa] gi|222835888|gb|EEE74309.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/89 (37%), Positives = 52/89 (58%)
 Frame = +3

Query: 3   EIYKPGHKCKTQHLYMLVGTEEDDTIDEAKGEEDHVLQQMETDMEISLHALTGNVGQNTI 182
           E + PGHKC+   L +L G +E    D+ + E D        + +ISLHA+TG     T+
Sbjct: 298 EKFTPGHKCQKPRLLLLEGDDETSLQDDEEFEGD--------EPQISLHAITGWSIARTM 349

Query: 183 RIQGLLKKRPITILIDTGSTHSFLDSEVA 269
           RI   ++ + +T+LID+GSTH+F+   +A
Sbjct: 350 RIMARIENQDLTVLIDSGSTHNFISERIA 378


>ref|XP_002330315.1| predicted protein [Populus trichocarpa] gi|222871350|gb|EEF08481.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
 Frame = +3

Query: 9   YKPGHKCKTQHLYMLVGTEEDDTIDEAKGEEDHVLQ------QMETDMEISLHALTGNVG 170
           Y PGH+C T+ L+M+   EE++  DE   E D ++Q      ++  +  +SL+AL  N  
Sbjct: 346 YTPGHRCNTKGLHMIERVEEEE--DEEVKELDDIMQDKCKERRLIDEFGLSLNALAENDT 403

Query: 171 QNTIRIQGLLKKRPITILIDTGSTHSFLD 257
            NTIRI+G  + R + I I +GSTHSF+D
Sbjct: 404 CNTIRIKGNCQGRDLIIFIVSGSTHSFID 432


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