BLASTX nr result

ID: Coptis21_contig00012034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012034
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39537.3| unnamed protein product [Vitis vinifera]              114   4e-23
ref|XP_002283474.1| PREDICTED: uncharacterized protein LOC100244...   114   4e-23
ref|XP_002330220.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-21
ref|XP_003554632.1| PREDICTED: uncharacterized protein LOC100811...   106   7e-21
ref|XP_002512458.1| RNA binding protein, putative [Ricinus commu...   105   2e-20

>emb|CBI39537.3| unnamed protein product [Vitis vinifera]
          Length = 769

 Score =  114 bits (284), Expect = 4e-23
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +2

Query: 494 KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 673
           K+QD RSSSPVQLSKFLGR KDD VRRSAVSGKKI+LKLDKSKEDK AENKRNELLKFLN
Sbjct: 706 KEQDERSSSPVQLSKFLGRGKDDSVRRSAVSGKKILLKLDKSKEDKAAENKRNELLKFLN 765

Query: 674 ASYD 685
           ASYD
Sbjct: 766 ASYD 769


>ref|XP_002283474.1| PREDICTED: uncharacterized protein LOC100244276 [Vitis vinifera]
          Length = 171

 Score =  114 bits (284), Expect = 4e-23
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +2

Query: 494 KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 673
           K+QD RSSSPVQLSKFLGR KDD VRRSAVSGKKI+LKLDKSKEDK AENKRNELLKFLN
Sbjct: 108 KEQDERSSSPVQLSKFLGRGKDDSVRRSAVSGKKILLKLDKSKEDKAAENKRNELLKFLN 167

Query: 674 ASYD 685
           ASYD
Sbjct: 168 ASYD 171


>ref|XP_002330220.1| predicted protein [Populus trichocarpa] gi|222871676|gb|EEF08807.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score =  108 bits (269), Expect = 2e-21
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +2

Query: 494 KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 673
           K+QD R+SSPVQLSKFLGRDK+D VRRSAVSGKKI+LKL+KSKEDK AENKRNELLKFLN
Sbjct: 25  KEQDERNSSPVQLSKFLGRDKEDGVRRSAVSGKKILLKLEKSKEDKAAENKRNELLKFLN 84

Query: 674 ASYD 685
           AS D
Sbjct: 85  ASCD 88


>ref|XP_003554632.1| PREDICTED: uncharacterized protein LOC100811105 [Glycine max]
          Length = 183

 Score =  106 bits (265), Expect = 7e-21
 Identities = 53/64 (82%), Positives = 60/64 (93%)
 Frame = +2

Query: 494 KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 673
           K+ D RSSSPVQLSKFLGRDKDD VRRSAVSGKKI+LKL+K+KEDK+AE+KRNELL FLN
Sbjct: 120 KQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLN 179

Query: 674 ASYD 685
           AS+D
Sbjct: 180 ASFD 183


>ref|XP_002512458.1| RNA binding protein, putative [Ricinus communis]
           gi|223548419|gb|EEF49910.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 190

 Score =  105 bits (261), Expect = 2e-20
 Identities = 53/64 (82%), Positives = 60/64 (93%)
 Frame = +2

Query: 494 KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 673
           K+++ R+SSPVQLSKFLGR KDD VRRSAVSGKKI+LKL+KSKEDK AENKRNELLKFLN
Sbjct: 127 KQREERNSSPVQLSKFLGRAKDDGVRRSAVSGKKILLKLEKSKEDKEAENKRNELLKFLN 186

Query: 674 ASYD 685
           AS+D
Sbjct: 187 ASFD 190