BLASTX nr result
ID: Coptis21_contig00012034
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00012034 (928 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI39537.3| unnamed protein product [Vitis vinifera] 114 4e-23 ref|XP_002283474.1| PREDICTED: uncharacterized protein LOC100244... 114 4e-23 ref|XP_002330220.1| predicted protein [Populus trichocarpa] gi|2... 108 2e-21 ref|XP_003554632.1| PREDICTED: uncharacterized protein LOC100811... 106 7e-21 ref|XP_002512458.1| RNA binding protein, putative [Ricinus commu... 105 2e-20 >emb|CBI39537.3| unnamed protein product [Vitis vinifera] Length = 769 Score = 114 bits (284), Expect = 4e-23 Identities = 58/64 (90%), Positives = 60/64 (93%) Frame = +2 Query: 494 KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 673 K+QD RSSSPVQLSKFLGR KDD VRRSAVSGKKI+LKLDKSKEDK AENKRNELLKFLN Sbjct: 706 KEQDERSSSPVQLSKFLGRGKDDSVRRSAVSGKKILLKLDKSKEDKAAENKRNELLKFLN 765 Query: 674 ASYD 685 ASYD Sbjct: 766 ASYD 769 >ref|XP_002283474.1| PREDICTED: uncharacterized protein LOC100244276 [Vitis vinifera] Length = 171 Score = 114 bits (284), Expect = 4e-23 Identities = 58/64 (90%), Positives = 60/64 (93%) Frame = +2 Query: 494 KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 673 K+QD RSSSPVQLSKFLGR KDD VRRSAVSGKKI+LKLDKSKEDK AENKRNELLKFLN Sbjct: 108 KEQDERSSSPVQLSKFLGRGKDDSVRRSAVSGKKILLKLDKSKEDKAAENKRNELLKFLN 167 Query: 674 ASYD 685 ASYD Sbjct: 168 ASYD 171 >ref|XP_002330220.1| predicted protein [Populus trichocarpa] gi|222871676|gb|EEF08807.1| predicted protein [Populus trichocarpa] Length = 88 Score = 108 bits (269), Expect = 2e-21 Identities = 55/64 (85%), Positives = 60/64 (93%) Frame = +2 Query: 494 KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 673 K+QD R+SSPVQLSKFLGRDK+D VRRSAVSGKKI+LKL+KSKEDK AENKRNELLKFLN Sbjct: 25 KEQDERNSSPVQLSKFLGRDKEDGVRRSAVSGKKILLKLEKSKEDKAAENKRNELLKFLN 84 Query: 674 ASYD 685 AS D Sbjct: 85 ASCD 88 >ref|XP_003554632.1| PREDICTED: uncharacterized protein LOC100811105 [Glycine max] Length = 183 Score = 106 bits (265), Expect = 7e-21 Identities = 53/64 (82%), Positives = 60/64 (93%) Frame = +2 Query: 494 KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 673 K+ D RSSSPVQLSKFLGRDKDD VRRSAVSGKKI+LKL+K+KEDK+AE+KRNELL FLN Sbjct: 120 KQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLN 179 Query: 674 ASYD 685 AS+D Sbjct: 180 ASFD 183 >ref|XP_002512458.1| RNA binding protein, putative [Ricinus communis] gi|223548419|gb|EEF49910.1| RNA binding protein, putative [Ricinus communis] Length = 190 Score = 105 bits (261), Expect = 2e-20 Identities = 53/64 (82%), Positives = 60/64 (93%) Frame = +2 Query: 494 KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 673 K+++ R+SSPVQLSKFLGR KDD VRRSAVSGKKI+LKL+KSKEDK AENKRNELLKFLN Sbjct: 127 KQREERNSSPVQLSKFLGRAKDDGVRRSAVSGKKILLKLEKSKEDKEAENKRNELLKFLN 186 Query: 674 ASYD 685 AS+D Sbjct: 187 ASFD 190