BLASTX nr result

ID: Coptis21_contig00012029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012029
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633621.1| PREDICTED: uncharacterized protein LOC100855...    91   6e-16
ref|XP_002512597.1| conserved hypothetical protein [Ricinus comm...    70   1e-09
ref|XP_002318912.1| predicted protein [Populus trichocarpa] gi|2...    61   5e-07
ref|XP_003626119.1| hypothetical protein MTR_7g111230 [Medicago ...    59   3e-06
ref|XP_004144798.1| PREDICTED: uncharacterized protein LOC101216...    57   7e-06

>ref|XP_003633621.1| PREDICTED: uncharacterized protein LOC100855194 [Vitis vinifera]
          Length = 154

 Score = 90.9 bits (224), Expect = 6e-16
 Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 14/101 (13%)
 Frame = +2

Query: 233 GTKIKKVKKAVGFPFRKIKN--IHKQQQLGKTFSSSS------------YLCFKQPQILN 370
           G  + K K+ V FPFRK K   ++  ++  ++ SSS+            +LCFKQPQ + 
Sbjct: 50  GRNLVKAKQVVLFPFRKAKKQLVYSGRKRSRSSSSSASFSGKREGFVGCFLCFKQPQTME 109

Query: 371 SADSSPVSDPNNKKFSYEQLRVLIESNDFYSKECNVHIQIP 493
           S  +S  SDPNN  F+YE L+VLIE NDFYSKECN HI IP
Sbjct: 110 SPANSQTSDPNNPAFTYEHLKVLIEKNDFYSKECNPHIDIP 150


>ref|XP_002512597.1| conserved hypothetical protein [Ricinus communis]
           gi|223548558|gb|EEF50049.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 254

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 41/93 (44%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
 Frame = +2

Query: 233 GTKIKKVKKAVGFPFRKIKNIHKQQQLGKTFSSSSYL------------CFKQPQILNSA 376
           G    K +  V FPF K K + K++   +  SSSS L            C KQ   L S 
Sbjct: 160 GGDFSKARGVVLFPFTKAKKLLKKKSDKRPSSSSSSLSSRVAVTGKNCFCLKQNFTLQSP 219

Query: 377 DSSPVSDPNNKKFSYEQLRVLIESNDFYSKECN 475
             S  SDPN+ KF++E LR LIE NDFYSKECN
Sbjct: 220 TDSQTSDPNHPKFTFEMLRTLIEKNDFYSKECN 252


>ref|XP_002318912.1| predicted protein [Populus trichocarpa] gi|222857288|gb|EEE94835.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
 Frame = +2

Query: 248 KVKKAVGFPFRKIKNIHKQQQLGKTFS---------SSSYLCFKQPQILNSADSSPV--- 391
           K  K V FPF K   +  ++      S         S+S  CFKQP  L  + +S     
Sbjct: 95  KPNKVVLFPFIKPNRLFHKKSTPAAASNADCFPGNTSTSCFCFKQPPTLEPSSTSTTLQS 154

Query: 392 --SDPNNKKFSYEQLRVLIESNDFYSKECNVH 481
             SDPN+  F+++ L+ LIE+NDFYSKECN H
Sbjct: 155 QTSDPNHPDFTFDMLKSLIETNDFYSKECNPH 186


>ref|XP_003626119.1| hypothetical protein MTR_7g111230 [Medicago truncatula]
           gi|87241003|gb|ABD32861.1| hypothetical protein
           MtrDRAFT_AC149038g24v2 [Medicago truncatula]
           gi|355501134|gb|AES82337.1| hypothetical protein
           MTR_7g111230 [Medicago truncatula]
          Length = 170

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 24/48 (50%), Positives = 34/48 (70%)
 Frame = +2

Query: 344 CFKQPQILNSADSSPVSDPNNKKFSYEQLRVLIESNDFYSKECNVHIQ 487
           CF +P +L + + S  SDPN+ KF++  L+ L+E NDF SKECN HI+
Sbjct: 119 CFSRPNVLENPNGSTSSDPNDPKFTHSMLKSLLEKNDFCSKECNPHIE 166


>ref|XP_004144798.1| PREDICTED: uncharacterized protein LOC101216013 [Cucumis sativus]
          Length = 169

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 23/104 (22%)
 Frame = +2

Query: 248 KVKKAVGFPFRKIKNIHKQQQLGKTFSSSSYLCFKQPQILN------------------- 370
           K K+ + +PFRK K    ++++ +  S SS  C ++   L+                   
Sbjct: 59  KAKQVMFYPFRKAKKQILRRRIKRDSSCSSVTCSRRTNSLDKRGFDGSVNQGCGFCLTKL 118

Query: 371 ----SADSSPVSDPNNKKFSYEQLRVLIESNDFYSKECNVHIQI 490
               S + SP +DPN++KF+ E L+VLIE NDFYSKE N H  +
Sbjct: 119 SISDSKNGSP-TDPNHRKFTNEMLKVLIEKNDFYSKESNPHFDV 161


Top