BLASTX nr result
ID: Coptis21_contig00012026
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00012026
(530 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_563782.1| PHF5-like protein [Arabidopsis thaliana] gi|184... 122 3e-26
ref|XP_002525661.1| Pre-mRNA-splicing factor ini1 [Ricinus commu... 122 3e-26
ref|XP_002525660.1| Pre-mRNA-splicing factor ini1 [Ricinus commu... 122 3e-26
ref|XP_003589422.1| PHD finger-like domain-containing protein 5A... 122 3e-26
ref|NP_001152699.1| PHD finger-like domain-containing protein 5A... 122 3e-26
>ref|NP_563782.1| PHF5-like protein [Arabidopsis thaliana]
gi|18402218|ref|NP_565691.1| PHD finger-like
domain-containing protein 5A [Arabidopsis thaliana]
gi|145323768|ref|NP_001077473.1| PHF5-like protein
[Arabidopsis thaliana] gi|334182358|ref|NP_001184928.1|
PHF5-like protein [Arabidopsis thaliana]
gi|297826397|ref|XP_002881081.1| hypothetical protein
ARALYDRAFT_901975 [Arabidopsis lyrata subsp. lyrata]
gi|122223686|sp|Q0WMV8.1|PHF5B_ARATH RecName: Full=PHD
finger-like domain-containing protein 5B
gi|387935355|sp|P0DI19.1|PHF5A_ARATH RecName: Full=PHD
finger-like domain-containing protein 5A
gi|3420051|gb|AAC31852.1| expressed protein [Arabidopsis
thaliana] gi|21593073|gb|AAM65022.1| unknown
[Arabidopsis thaliana] gi|21618034|gb|AAM67084.1|
unknown [Arabidopsis thaliana]
gi|26451992|dbj|BAC43086.1| unknown protein [Arabidopsis
thaliana] gi|28416819|gb|AAO42940.1| At2g30000
[Arabidopsis thaliana] gi|30793845|gb|AAP40375.1|
unknown protein [Arabidopsis thaliana]
gi|30794025|gb|AAP40459.1| unknown protein [Arabidopsis
thaliana] gi|110739257|dbj|BAF01542.1| hypothetical
protein [Arabidopsis thaliana]
gi|297326920|gb|EFH57340.1| hypothetical protein
ARALYDRAFT_901975 [Arabidopsis lyrata subsp. lyrata]
gi|330253240|gb|AEC08334.1| PHD finger-like
domain-containing protein 5A [Arabidopsis thaliana]
gi|332189964|gb|AEE28085.1| PHF5-like protein
[Arabidopsis thaliana] gi|332189965|gb|AEE28086.1|
PHF5-like protein [Arabidopsis thaliana]
gi|332189966|gb|AEE28087.1| PHF5-like protein
[Arabidopsis thaliana]
Length = 110
Score = 122 bits (307), Expect = 3e-26
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = +1
Query: 1 GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 165
GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR
Sbjct: 56 GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
>ref|XP_002525661.1| Pre-mRNA-splicing factor ini1 [Ricinus communis]
gi|223535097|gb|EEF36779.1| Pre-mRNA-splicing factor
ini1 [Ricinus communis]
Length = 110
Score = 122 bits (307), Expect = 3e-26
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = +1
Query: 1 GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 165
GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR
Sbjct: 56 GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
>ref|XP_002525660.1| Pre-mRNA-splicing factor ini1 [Ricinus communis]
gi|223535096|gb|EEF36778.1| Pre-mRNA-splicing factor
ini1 [Ricinus communis]
Length = 110
Score = 122 bits (307), Expect = 3e-26
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = +1
Query: 1 GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 165
GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR
Sbjct: 56 GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
>ref|XP_003589422.1| PHD finger-like domain-containing protein 5A [Medicago truncatula]
gi|357469465|ref|XP_003605017.1| PHD finger-like
domain-containing protein 5A [Medicago truncatula]
gi|217075230|gb|ACJ85975.1| unknown [Medicago
truncatula] gi|355478470|gb|AES59673.1| PHD finger-like
domain-containing protein 5A [Medicago truncatula]
gi|355506072|gb|AES87214.1| PHD finger-like
domain-containing protein 5A [Medicago truncatula]
gi|388511423|gb|AFK43773.1| unknown [Medicago
truncatula]
Length = 110
Score = 122 bits (307), Expect = 3e-26
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = +1
Query: 1 GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 165
GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR
Sbjct: 56 GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
>ref|NP_001152699.1| PHD finger-like domain-containing protein 5A [Zea mays]
gi|226499812|ref|NP_001148557.1| PHD finger-like
domain-containing protein 5A [Zea mays]
gi|195620406|gb|ACG32033.1| PHD finger-like
domain-containing protein 5A [Zea mays]
gi|195636738|gb|ACG37837.1| PHD finger-like
domain-containing protein 5A [Zea mays]
gi|195659129|gb|ACG49032.1| PHD finger-like
domain-containing protein 5A [Zea mays]
gi|223946749|gb|ACN27458.1| unknown [Zea mays]
gi|414584947|tpg|DAA35518.1| TPA: PHD finger-like
domain-containing protein 5A isoform 1 [Zea mays]
gi|414584948|tpg|DAA35519.1| TPA: PHD finger-like
domain-containing protein 5A isoform 2 [Zea mays]
gi|414584949|tpg|DAA35520.1| TPA: PHD finger-like
domain-containing protein 5A isoform 3 [Zea mays]
Length = 110
Score = 122 bits (307), Expect = 3e-26
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = +1
Query: 1 GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 165
GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR
Sbjct: 56 GRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110