BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011998
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44336.1| unknown [Lotus japonicus]                               72   7e-11
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    69   6e-10
ref|XP_002531145.1| conserved hypothetical protein [Ricinus comm...    68   1e-09
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    67   2e-09
ref|XP_002531144.1| conserved hypothetical protein [Ricinus comm...    67   2e-09

>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 10/116 (8%)
 Frame = -2

Query: 320 IPDDILLDILVRLSLKSLLRCKCVCKHWCSLIRDPTFVQLHLDHVQKESNIAGFSQVRTC 141
           +PD+++++IL RL +KSLL+ +CVCK W  LI DP F++ HL H+ K+S +  F+  R  
Sbjct: 63  LPDELVVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHL-HLSKQSTL--FNHHRII 119

Query: 140 RYATSICFY----SIDKDGFATEVL------PPVNDVSSLGAITSCNGLLCFIGKG 3
             AT+  F+    S+     +T  +      P  N     G + SCNGLLCF  KG
Sbjct: 120 LSATTAEFHLKSCSVSSLFNSTSTVCEDLNYPVKNKYRHDGIVGSCNGLLCFAIKG 175


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
 Frame = -2

Query: 365 ISTKTGTGRSKLVVRIPDDILLDILVRLSLKSLLRCKCVCKHWCSLIRDPTFVQLHLDHV 186
           +  + G   S  +  +PD+++++IL RL +KSLL+ +CVCK W SLI DP F++ HL H+
Sbjct: 34  VQKQQGMSESLPLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHL-HL 92

Query: 185 QKESNIAGFSQV----RTCRYATSICFYSIDKDGFAT---EVLPPV-NDVSSLGAITSCN 30
              S      ++     T  +    C  S   +  +T   E+  PV N     G + SCN
Sbjct: 93  SSRSTHFTHHRIILSATTAEFHLKSCSLSSLFNNLSTVCDELNYPVKNKFRHDGIVGSCN 152

Query: 29  GLLCFIGKG 3
           GLLCF  KG
Sbjct: 153 GLLCFAIKG 161


>ref|XP_002531145.1| conserved hypothetical protein [Ricinus communis]
           gi|223529258|gb|EEF31230.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/103 (33%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
 Frame = -2

Query: 323 RIPDDILLDILVRLSLKSLLRCKCVCKHWCSLIRDPTFVQLHLDH-VQKESNIAGFSQVR 147
           RIP D+L++IL++  + ++LRC+CV K W +LI DP F++ H D+ +Q  ++   F+++ 
Sbjct: 4   RIPRDLLIEILIQCQIPTILRCRCVSKQWRALIDDPQFIKQHTDYAIQTNASRIFFNEL- 62

Query: 146 TCRYATSICFYSIDKDGFATEVLPPVNDVSSLGAITSCNGLLC 18
                 ++C  S   D      +P ++ V  +  + SCNGLLC
Sbjct: 63  ----FGNLC--SSPLDTLEIRNVPIISQVQPVSLVGSCNGLLC 99


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 44/117 (37%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
 Frame = -2

Query: 320 IPDDILLDILVRLSLKSLLRCKCVCKHWCSLIRDPTFVQLHLDHVQKESNIAGFSQVRTC 141
           +PD+++++IL RL +KSLL+ +CVCK W SLI DP F++ HL      S    F+  R  
Sbjct: 49  LPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHL---HLSSRCTHFTHHRII 105

Query: 140 RYATSICFY-------SIDKDGFATEV----LPPVNDVSSLGAITSCNGLLCFIGKG 3
             AT+  F+       S+  +  +T       P  N     G + SCNGLLCF  KG
Sbjct: 106 LSATTAEFHLKSCSLSSLFNNPSSTVCDDLNYPVKNKFRHDGIVGSCNGLLCFAIKG 162


>ref|XP_002531144.1| conserved hypothetical protein [Ricinus communis]
           gi|223529257|gb|EEF31229.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 389

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
 Frame = -2

Query: 323 RIPDDILLDILVRLSLKSLLRCKCVCKHWCSLIRDPTFVQLHLDHVQKESNIAGFSQVRT 144
           RI  +++ +ILVR  L+++LRC+CVC+ W S+I D  F++ H+D+  K +    F     
Sbjct: 4   RISPEVVAEILVRSELQTILRCRCVCQQWRSIIDDTNFIKYHIDYSTKTNTNYSF----- 58

Query: 143 CRYATSI--CFYSIDKDGF-ATEVLPPVN--DVSSLGAITSCNGLLCF 15
             Y   +   FY +D D   A E L   N  ++ S   I SCNGLLCF
Sbjct: 59  --YLKEVNGDFYDLDLDTINACESLEICNLPNIISGTLIGSCNGLLCF 104