BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011996
         (2072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   128   3e-36
ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   122   4e-35
ref|NP_001234293.1| succinyl-CoA ligase [ADP-forming] subunit be...   123   9e-35
ref|NP_001047463.1| Os02g0621700 [Oryza sativa Japonica Group] g...   122   2e-34
gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [So...   121   4e-34

>ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
            mitochondrial [Vitis vinifera]
            gi|147782941|emb|CAN72294.1| hypothetical protein
            VITISV_037293 [Vitis vinifera]
            gi|297744178|emb|CBI37148.3| unnamed protein product
            [Vitis vinifera]
          Length = 423

 Score =  128 bits (322), Expect(2) = 3e-36
 Identities = 75/151 (49%), Positives = 93/151 (61%), Gaps = 8/151 (5%)
 Frame = -2

Query: 1108 NKLYLCENLSLVNDRCFAITFDRTTCGPLILACRKGRTSIEDQAEKFPDIITKVPIGIFQ 929
            +K+YLCE +SLVN+  FAIT DR++ GP+I+ACRKG TSIED AEKFPD+I KVPI +FQ
Sbjct: 129  SKVYLCEKMSLVNEMYFAITLDRSSAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVFQ 188

Query: 928  GIT--EAAKVTGGLDPKAATRGVSMKQVKKLYKPFVHVTAQCXXXXXXXXXXXXXXXXLM 755
            GIT  +AAKV  GL PK A R  S++QVKKLYK F     +C                 +
Sbjct: 189  GITDEDAAKVVDGLAPKVADRNASIEQVKKLYKLF----CECDCTLLEINPIAETSDNQL 244

Query: 754  *SCTMLL------ACCQKEIFAFHYSSQEDP 680
             +    L      A  QK IFA   ++QEDP
Sbjct: 245  VAADAKLNFDDNAAFRQKHIFALRDATQEDP 275



 Score = 52.0 bits (123), Expect(2) = 3e-36
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -3

Query: 669 VTAAKADLNHIGLANTLRCMMNGARLVIAMATMDVIKLH 553
           V AAKADLN+IGL   + CM+NGA L  AMATMD+IKLH
Sbjct: 278 VAAAKADLNYIGLDGEIGCMVNGAGL--AMATMDIIKLH 314


>ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
            mitochondrial-like [Glycine max]
          Length = 422

 Score =  122 bits (307), Expect(2) = 4e-35
 Identities = 74/151 (49%), Positives = 91/151 (60%), Gaps = 8/151 (5%)
 Frame = -2

Query: 1108 NKLYLCENLSLVNDRCFAITFDRTTCGPLILACRKGRTSIEDQAEKFPDIITKVPIGIFQ 929
            +K+YLCE LSLVN+  FAIT DRT+ GP+I+AC KG TSIED AEKFPD+I KVP+ +F+
Sbjct: 129  SKVYLCEKLSLVNEMYFAITLDRTSAGPIIIACSKGGTSIEDLAEKFPDMIIKVPVDVFE 188

Query: 928  GIT--EAAKVTGGLDPKAATRGVSMKQVKKLYKPFVHVTAQCXXXXXXXXXXXXXXXXLM 755
            GIT  +AAKV  GL  K A R  S++QVK LYK FV     C                 +
Sbjct: 189  GITDEDAAKVVDGLALKVADRNKSIEQVKNLYKLFV----DCDCTLLEINPIAETADNQL 244

Query: 754  *SCTMLL------ACCQKEIFAFHYSSQEDP 680
             +    L      A  QKEIFA   ++QEDP
Sbjct: 245  VAADAKLNFDDNAAYRQKEIFALRDTTQEDP 275



 Score = 53.9 bits (128), Expect(2) = 4e-35
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = -3

Query: 669 VTAAKADLNHIGLANTLRCMMNGARLVIAMATMDVIKLH 553
           VTAAKADLN+IGL   + CM+NGA L  AMATMD+IKLH
Sbjct: 278 VTAAKADLNYIGLDGEIGCMVNGAGL--AMATMDIIKLH 314


>ref|NP_001234293.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
            [Solanum lycopersicum] gi|75147005|sp|Q84LB6.1|SUCB_SOLLC
            RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit
            beta, mitochondrial; Short=SlSCoALbeta; Flags: Precursor
            gi|27803873|gb|AAO22150.1| succinyl CoA ligase beta
            subunit [Solanum lycopersicum]
          Length = 417

 Score =  123 bits (309), Expect(2) = 9e-35
 Identities = 74/149 (49%), Positives = 90/149 (60%), Gaps = 6/149 (4%)
 Frame = -2

Query: 1108 NKLYLCENLSLVNDRCFAITFDRTTCGPLILACRKGRTSIEDQAEKFPDIITKVPIGIFQ 929
            +K+YLCE +SLVN+  F+I  DR T GPLI+ACRKG TSIED AEKFPD+I KVPI +F+
Sbjct: 125  SKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFK 184

Query: 928  GIT--EAAKVTGGLDPKAATRGVSMKQVKKLYKPFVHVTAQCXXXXXXXXXXXXXXXXLM 755
            GI+  +AAKV  GL PK A R  S++QVKKLYK F      C                + 
Sbjct: 185  GISDADAAKVVDGLAPKVADRNDSIEQVKKLYKLFCE--TDCTMLEINPLAETSDNKLVA 242

Query: 754  *SCTMLL----ACCQKEIFAFHYSSQEDP 680
                +      A  QKEIF+   SSQEDP
Sbjct: 243  ADAKLNFDDNAAYRQKEIFSLRDSSQEDP 271



 Score = 52.0 bits (123), Expect(2) = 9e-35
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -3

Query: 669 VTAAKADLNHIGLANTLRCMMNGARLVIAMATMDVIKLH 553
           V AAKADLN+IGL   + CM+NGA L  AMATMD+IKLH
Sbjct: 274 VAAAKADLNYIGLDGEIGCMVNGAGL--AMATMDIIKLH 310


>ref|NP_001047463.1| Os02g0621700 [Oryza sativa Japonica Group]
            gi|75261432|sp|Q6K9N6.1|SUCB_ORYSJ RecName:
            Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
            mitochondrial; AltName: Full=Succinyl-CoA synthetase beta
            chain; Short=SCS-beta; Flags: Precursor
            gi|47847769|dbj|BAD21546.1| putative succinyl-CoA ligase
            (GDP-forming) beta-chain, mitochondrial precursor [Oryza
            sativa Japonica Group] gi|113536994|dbj|BAF09377.1|
            Os02g0621700 [Oryza sativa Japonica Group]
            gi|125540340|gb|EAY86735.1| hypothetical protein
            OsI_08117 [Oryza sativa Indica Group]
            gi|125582922|gb|EAZ23853.1| hypothetical protein
            OsJ_07569 [Oryza sativa Japonica Group]
            gi|215704850|dbj|BAG94878.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 422

 Score =  122 bits (306), Expect(2) = 2e-34
 Identities = 73/149 (48%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
 Frame = -2

Query: 1108 NKLYLCENLSLVNDRCFAITFDRTTCGPLILACRKGRTSIEDQAEKFPDIITKVPIGIFQ 929
            +K+YLCE LSLVN+  FAIT DR T GPLI+AC KG TSIED AEK+PD+I KVPI +F+
Sbjct: 129  SKVYLCEKLSLVNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFK 188

Query: 928  GIT--EAAKVTGGLDPKAATRGVSMKQVKKLYKPFVHVTAQCXXXXXXXXXXXXXXXXLM 755
            GIT  +AAKV  GL PK A R  S++Q+KKLY+ F    + C                + 
Sbjct: 189  GITDDDAAKVVDGLAPKTADRQSSIEQIKKLYELF--CKSDCTLLEINPLAETADNKLVA 246

Query: 754  *SCTMLL----ACCQKEIFAFHYSSQEDP 680
                +      A  QKEIFA   ++QEDP
Sbjct: 247  ADAKLNFDDNAAFRQKEIFAMRDTTQEDP 275



 Score = 52.0 bits (123), Expect(2) = 2e-34
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -3

Query: 669 VTAAKADLNHIGLANTLRCMMNGARLVIAMATMDVIKLH 553
           V AAKADLN+IGL   + CM+NGA L  AMATMD+IKLH
Sbjct: 278 VAAAKADLNYIGLDGEIGCMVNGAGL--AMATMDIIKLH 314


>gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [Solanum tuberosum]
          Length = 421

 Score =  121 bits (304), Expect(2) = 4e-34
 Identities = 73/149 (48%), Positives = 89/149 (59%), Gaps = 6/149 (4%)
 Frame = -2

Query: 1108 NKLYLCENLSLVNDRCFAITFDRTTCGPLILACRKGRTSIEDQAEKFPDIITKVPIGIFQ 929
            +K+YLCE +SLVN+  F+I  DR T GPLI+ACRKG TSIED AEKFPD+I KVPI +F+
Sbjct: 129  SKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFK 188

Query: 928  GIT--EAAKVTGGLDPKAATRGVSMKQVKKLYKPFVHVTAQCXXXXXXXXXXXXXXXXLM 755
            GI+  +AAKV  GL PK A R  S++QVKKLY  F      C                + 
Sbjct: 189  GISDEDAAKVVDGLAPKVADRNDSIEQVKKLYNLFCE--TDCTMLEINPLAETSDNKLVA 246

Query: 754  *SCTMLL----ACCQKEIFAFHYSSQEDP 680
                +      A  QKEIF+   SSQEDP
Sbjct: 247  ADAKLNFDDNAAYRQKEIFSLRDSSQEDP 275



 Score = 52.0 bits (123), Expect(2) = 4e-34
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -3

Query: 669 VTAAKADLNHIGLANTLRCMMNGARLVIAMATMDVIKLH 553
           V AAKADLN+IGL   + CM+NGA L  AMATMD+IKLH
Sbjct: 278 VAAAKADLNYIGLDGEIGCMVNGAGL--AMATMDIIKLH 314