BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011987
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like prote...   172   1e-40
ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative ...   172   1e-40
ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like prote...   172   2e-40
ref|XP_002311269.1| predicted protein [Populus trichocarpa] gi|1...   171   5e-40
ref|XP_002316168.1| predicted protein [Populus trichocarpa] gi|1...   171   5e-40

>ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus] gi|449498381|ref|XP_004160523.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus]
          Length = 92

 Score =  172 bits (437), Expect = 1e-40
 Identities = 86/91 (94%), Positives = 87/91 (95%)
 Frame = +2

Query: 428 MSGGGEKGLGATKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 607
           MS GGEKG  +TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSIGGEKGSASTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 608 GQLKNKYGDAFIRGNNVLYISTSKRTLPEGS 700
           GQLKNKYGDAFIRGNNVLYISTSKRTL EGS
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLAEGS 91


>ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative [Ricinus communis]
           gi|223525355|gb|EEF27977.1| small nuclear
           ribonucleoprotein f, putative [Ricinus communis]
          Length = 91

 Score =  172 bits (437), Expect = 1e-40
 Identities = 84/91 (92%), Positives = 87/91 (95%)
 Frame = +2

Query: 428 MSGGGEKGLGATKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 607
           MSGGGEKG   TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSGGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 608 GQLKNKYGDAFIRGNNVLYISTSKRTLPEGS 700
           GQLKNKYGDAFIRGNNVLYIST+KRTL +G+
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTTKRTLADGA 91


>ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Vitis
           vinifera] gi|296084324|emb|CBI24712.3| unnamed protein
           product [Vitis vinifera]
          Length = 91

 Score =  172 bits (435), Expect = 2e-40
 Identities = 85/91 (93%), Positives = 86/91 (94%)
 Frame = +2

Query: 428 MSGGGEKGLGATKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 607
           MS GGEKG   TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSTGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 608 GQLKNKYGDAFIRGNNVLYISTSKRTLPEGS 700
           GQLKNKYGDAFIRGNNVLYISTSKRTL EG+
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 91


>ref|XP_002311269.1| predicted protein [Populus trichocarpa] gi|118483023|gb|ABK93423.1|
           unknown [Populus trichocarpa]
           gi|222851089|gb|EEE88636.1| predicted protein [Populus
           trichocarpa]
          Length = 91

 Score =  171 bits (432), Expect = 5e-40
 Identities = 84/91 (92%), Positives = 86/91 (94%)
 Frame = +2

Query: 428 MSGGGEKGLGATKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 607
           MS GGEKG   TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSTGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 608 GQLKNKYGDAFIRGNNVLYISTSKRTLPEGS 700
           GQLKNKYGDAFIRGNNVLYISTSKRTL +G+
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLADGA 91


>ref|XP_002316168.1| predicted protein [Populus trichocarpa] gi|118482915|gb|ABK93371.1|
           unknown [Populus trichocarpa]
           gi|222865208|gb|EEF02339.1| predicted protein [Populus
           trichocarpa]
          Length = 91

 Score =  171 bits (432), Expect = 5e-40
 Identities = 84/91 (92%), Positives = 86/91 (94%)
 Frame = +2

Query: 428 MSGGGEKGLGATKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 607
           MS GGEKG   TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSSGGEKGSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 608 GQLKNKYGDAFIRGNNVLYISTSKRTLPEGS 700
           GQLKNKYGDAFIRGNNVLYISTSKRTL +G+
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLADGA 91