BLASTX nr result

ID: Coptis21_contig00011976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011976
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding prot...   176   2e-42
emb|CBI22535.3| unnamed protein product [Vitis vinifera]              176   2e-42
emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]   176   2e-42
ref|XP_003526695.1| PREDICTED: polypyrimidine tract-binding prot...   174   5e-42
ref|XP_003523383.1| PREDICTED: polypyrimidine tract-binding prot...   174   5e-42

>ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           [Vitis vinifera]
          Length = 446

 Score =  176 bits (446), Expect = 2e-42
 Identities = 86/106 (81%), Positives = 92/106 (86%)
 Frame = -2

Query: 320 FRYAQPPSKVLHIRNCPWECTDEELVELGKRFGKVVNTKCNVGANRNQAFIEFADLNQAX 141
           FRY QPPSKVLH+RN PWECT+EEL+ELGK FGKVVNTKCNVGANRNQAFIEFADLNQA 
Sbjct: 10  FRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAI 69

Query: 140 XXXXXXXXXSDPAQLRGKTVYLQYSNRQEIVHNKTSADVTGNVLLV 3
                    S+PAQ+RGKTVYLQYSNRQEIV+NKTSADV GNVLLV
Sbjct: 70  AMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTSADVAGNVLLV 115


>emb|CBI22535.3| unnamed protein product [Vitis vinifera]
          Length = 1311

 Score =  176 bits (446), Expect = 2e-42
 Identities = 86/106 (81%), Positives = 92/106 (86%)
 Frame = -2

Query: 320 FRYAQPPSKVLHIRNCPWECTDEELVELGKRFGKVVNTKCNVGANRNQAFIEFADLNQAX 141
           FRY QPPSKVLH+RN PWECT+EEL+ELGK FGKVVNTKCNVGANRNQAFIEFADLNQA 
Sbjct: 10  FRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAI 69

Query: 140 XXXXXXXXXSDPAQLRGKTVYLQYSNRQEIVHNKTSADVTGNVLLV 3
                    S+PAQ+RGKTVYLQYSNRQEIV+NKTSADV GNVLLV
Sbjct: 70  AMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTSADVAGNVLLV 115


>emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]
          Length = 755

 Score =  176 bits (446), Expect = 2e-42
 Identities = 86/106 (81%), Positives = 92/106 (86%)
 Frame = -2

Query: 320 FRYAQPPSKVLHIRNCPWECTDEELVELGKRFGKVVNTKCNVGANRNQAFIEFADLNQAX 141
           FRY QPPSKVLH+RN PWECT+EEL+ELGK FGKVVNTKCNVGANRNQAFIEFADLNQA 
Sbjct: 319 FRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAI 378

Query: 140 XXXXXXXXXSDPAQLRGKTVYLQYSNRQEIVHNKTSADVTGNVLLV 3
                    S+PAQ+RGKTVYLQYSNRQEIV+NKTSADV GNVLLV
Sbjct: 379 AMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTSADVAGNVLLV 424


>ref|XP_003526695.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           [Glycine max]
          Length = 432

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/106 (80%), Positives = 92/106 (86%)
 Frame = -2

Query: 320 FRYAQPPSKVLHIRNCPWECTDEELVELGKRFGKVVNTKCNVGANRNQAFIEFADLNQAX 141
           FRY QPPSKVLH+RN PWECT+EEL+ELGK FGKVVNTKCNVGANRNQAFIEFADLNQA 
Sbjct: 10  FRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAI 69

Query: 140 XXXXXXXXXSDPAQLRGKTVYLQYSNRQEIVHNKTSADVTGNVLLV 3
                    S+PAQ+RGKTVYLQYSNRQEIV+NKT+ADV GNVLLV
Sbjct: 70  AMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLV 115


>ref|XP_003523383.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           [Glycine max]
          Length = 433

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/106 (80%), Positives = 92/106 (86%)
 Frame = -2

Query: 320 FRYAQPPSKVLHIRNCPWECTDEELVELGKRFGKVVNTKCNVGANRNQAFIEFADLNQAX 141
           FRY QPPSKVLH+RN PWECT+EEL+ELGK FGKVVNTKCNVGANRNQAFIEFADLNQA 
Sbjct: 10  FRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAI 69

Query: 140 XXXXXXXXXSDPAQLRGKTVYLQYSNRQEIVHNKTSADVTGNVLLV 3
                    S+PAQ+RGKTVYLQYSNRQEIV+NKT+ADV GNVLLV
Sbjct: 70  AMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVPGNVLLV 115


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