BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011974
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   181   4e-43
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   177   3e-42
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...   175   2e-41
ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...   171   4e-40
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   168   2e-39

>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  181 bits (458), Expect = 4e-43
 Identities = 107/255 (41%), Positives = 150/255 (58%), Gaps = 5/255 (1%)
 Frame = -1

Query: 965 EEVRNWLDLPQDVMIMIFMKLGVVEILVNAQKVCSSWRKLAKEPQLFRSIVIR---DPEK 795
           EE RNWLDLP+DV+  IF KLG +EIL  AQ+VCS WR ++KEP L+R+I +R   D E 
Sbjct: 15  EEERNWLDLPRDVVCTIFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTIDMRNSGDIET 74

Query: 794 YFRYLGHFTKFAKEVVDRSCGQLVKLSCTYVITKGLVHYIVDQSNLLKSLRLGFEAVISS 615
            F +L          +D S G L+ ++  Y  T  L+ +I   ++ L+SLRL     IS 
Sbjct: 75  NFVFLA----MCHRAIDYSSGHLLHINIEYFATDDLLRHITHSTSNLRSLRLACCYQISD 130

Query: 614 NEYIEVFKRLQHLEDLELCLSVFNSK--VIEELGRSCQSLKYFHLNLNRGTRHCNGSWDE 441
               E+ K L  LE+L++ +S FN     +E +GR C+ LK    N+ +G R  +   DE
Sbjct: 131 EGLCEIAKELPQLEELDISISSFNPTRDPLEAVGRCCRHLKTLKFNM-KGYRRPHIECDE 189

Query: 440 EAFVIAKCLPQLRRLCLVESALSNKGLEAILDGCPHIEYLDLQDCVYMDLKGDLLKRCVW 261
           EAF IA+ +P L  L L  + L+N+GL AILDGCPH+E LDL+ C  ++L G L KRC  
Sbjct: 190 EAFAIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAE 249

Query: 260 RKRKLKHRDGTTKSC 216
           + ++L+     T  C
Sbjct: 250 QIKELRLPCDPTDDC 264


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  177 bits (450), Expect = 3e-42
 Identities = 104/251 (41%), Positives = 152/251 (60%)
 Frame = -1

Query: 977 RTLKEEVRNWLDLPQDVMIMIFMKLGVVEILVNAQKVCSSWRKLAKEPQLFRSIVIRDPE 798
           R  +EE RNW +LP+DV  MI  KL  VEIL +AQ VCS WRKL +EP ++R+I + +  
Sbjct: 11  REEEEEERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLG 70

Query: 797 KYFRYLGHFTKFAKEVVDRSCGQLVKLSCTYVITKGLVHYIVDQSNLLKSLRLGFEAVIS 618
                     + A+  VDRS GQL+ +      T  L++YI+D+S+ ++ LRL     IS
Sbjct: 71  DLCDLGYDLEEMARHAVDRSGGQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVSCYGIS 130

Query: 617 SNEYIEVFKRLQHLEDLELCLSVFNSKVIEELGRSCQSLKYFHLNLNRGTRHCNGSWDEE 438
            +   E  KRL  L +++LC   F+ +V+E +G+ C  LK F LN  +G RH +   DEE
Sbjct: 131 DDGLSEGIKRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNC-QGFRHPHIECDEE 189

Query: 437 AFVIAKCLPQLRRLCLVESALSNKGLEAILDGCPHIEYLDLQDCVYMDLKGDLLKRCVWR 258
           A  IA+ +P L+ L L  + L+N GL AILDGC H+E LDL+ C  ++L G+L KRC  +
Sbjct: 190 ALAIAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRCAEQ 249

Query: 257 KRKLKHRDGTT 225
            + L++ + +T
Sbjct: 250 IKILRYPNDST 260


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score =  175 bits (444), Expect = 2e-41
 Identities = 99/264 (37%), Positives = 150/264 (56%), Gaps = 10/264 (3%)
 Frame = -1

Query: 965 EEVRNWLDLPQDVMIMIFMKLGVVEILVNAQKVCSSWRKLAKEPQLFRSIVI--RDPEKY 792
           +++RNW +LP  +   I ++LG +EIL NAQKVC  W ++ K+P ++R I I  R+    
Sbjct: 176 KKLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAA 235

Query: 791 FRYLGHFTKFAKEVVDRSCGQLVKLSCTYVITKGLVHYIVDQSNLLKSLRLGFEAVISSN 612
           F+Y        +  VDRS G L+++   Y  T  L+ YI D+S+ LKSL L     I+  
Sbjct: 236 FKY--DLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDE 293

Query: 611 EYIEVFKRLQHLEDLELCLSVFNSKVIEELGRSCQSLKYFHLNLNRGTRHCNGSWDEEAF 432
              +   ++  LE LE+   +F+ + + ++GRSC +LK   LN        N  +D+ A 
Sbjct: 294 GVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAK 353

Query: 431 VIAKCLPQLRRLCLVESALSNKGLEAILDGCPHIEYLDLQDCVYMDLKGDLLKRCVWRKR 252
            IA+ +P+LR L L+ + L+NKGL AILDGCPH+E+LDL+ C  ++L GDL KRC  R +
Sbjct: 354 AIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIK 413

Query: 251 KLK--------HRDGTTKSCITIF 204
            L+          DG+    +T F
Sbjct: 414 DLRCPNDSDDDSDDGSDNGAVTTF 437



 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 38/89 (42%), Positives = 53/89 (59%)
 Frame = -1

Query: 491 HLNLNRGTRHCNGSWDEEAFVIAKCLPQLRRLCLVESALSNKGLEAILDGCPHIEYLDLQ 312
           H +  R  R     +D+E   IA+ +P+LR L L  + L+N  LEAILD C H+ +LDL+
Sbjct: 4   HRSRQRNPRFKLWRYDDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLR 63

Query: 311 DCVYMDLKGDLLKRCVWRKRKLKHRDGTT 225
            C  ++L GDL KRC  R R L+  D +T
Sbjct: 64  RCFNINLLGDLEKRCSERIRDLRRPDDST 92


>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
            lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
            ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  171 bits (432), Expect = 4e-40
 Identities = 99/248 (39%), Positives = 147/248 (59%), Gaps = 1/248 (0%)
 Frame = -1

Query: 965  EEVRNWLDLPQDVMIMIFMKLGVVEILVNAQKVCSSWRKLAKEPQLFRSIVIRDPEKYFR 786
            EEVRNW +LP ++   I  +LG ++IL NAQKVC SWR++ K+P ++R I + +      
Sbjct: 342  EEVRNWAELPPELTSSILGRLGTIDILENAQKVCRSWRRVCKDPSMWRKIDMDNLGDLGA 401

Query: 785  YLGHFTKFAKEVVDRSCGQLVKLSCTYVITKGLVHYIVDQSNLLKSLRLGFEAVISSNEY 606
                     +  VDRS G LV++   Y  T  L++YI D+S+ L++LRL     I+   +
Sbjct: 402  MGYDLEIMCRHAVDRSQGGLVEIDIWYFGTDELLNYIADRSSNLRTLRLIMCYPIADEGF 461

Query: 605  IEVFKRLQHLEDLELCLSVFNSKVIEELGRSCQSLKYFHLNLNRGTRHCNGSWD-EEAFV 429
            IE   +L  +E LEL     + + ++ +G+SC +LK   LN     +  +  ++ EEA  
Sbjct: 462  IEAVVKLPLIEYLELSHCSLSGESLKVVGQSCPNLKTLKLNSEPDPKFNDDEFNNEEALA 521

Query: 428  IAKCLPQLRRLCLVESALSNKGLEAILDGCPHIEYLDLQDCVYMDLKGDLLKRCVWRKRK 249
            IA+ +P+LR L L  + L+N GL AILDGCPH+E+LDL+ C  +DL GDL KRCV R + 
Sbjct: 522  IAESMPELRHLQLFGNILTNVGLNAILDGCPHLEHLDLRKCSNVDLTGDLEKRCVERIKD 581

Query: 248  LKHRDGTT 225
            LK    +T
Sbjct: 582  LKRPTDST 589



 Score =  160 bits (404), Expect = 7e-37
 Identities = 94/259 (36%), Positives = 141/259 (54%), Gaps = 8/259 (3%)
 Frame = -1

Query: 962 EVRNWLDLPQDVMIMIFMKLGVVEILVNAQKVCSSWRKLAKEPQLFRSIVIRDPEKYFRY 783
           + RNW +LP ++   I ++LGVVEIL NAQKVC SWR++ K+P ++R IVI +      +
Sbjct: 5   DYRNWAELPAELTSSILLRLGVVEILENAQKVCRSWRRVCKDPSMWRKIVIDNSGNRDIF 64

Query: 782 LGHFTKFAKEVVDRSCGQLVKLSCTYVITKGLVHYIVDQSNL--------LKSLRLGFEA 627
                   +  VDRS G L+++   Y  T  L+ YI D+ +L        L+SLRL    
Sbjct: 65  KYDLDSMCRHAVDRSQGGLLEIDIEYFGTDKLLDYIADRFSLSLFSISSNLRSLRLVRCH 124

Query: 626 VISSNEYIEVFKRLQHLEDLELCLSVFNSKVIEELGRSCQSLKYFHLNLNRGTRHCNGSW 447
            I+     E   +L  LEDLE+    F+ + +  +G+SC  L    LN            
Sbjct: 125 QITDKGVAEAVVKLPLLEDLEVSYCSFSGECLSVVGQSCPHLTTLKLNRRPRVEFVINMR 184

Query: 446 DEEAFVIAKCLPQLRRLCLVESALSNKGLEAILDGCPHIEYLDLQDCVYMDLKGDLLKRC 267
           D  A  IA+ +P+LR L L+ +AL+N GL AILD C H+++LDL+ C  ++L  D +K+C
Sbjct: 185 DHNAIAIAESMPELRHLQLLGNALTNTGLNAILDSCTHLDHLDLRQCYNINLVEDFMKQC 244

Query: 266 VWRKRKLKHRDGTTKSCIT 210
           V R + L+  + +   C T
Sbjct: 245 VERIKYLRCPNDSIADCST 263


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  168 bits (426), Expect = 2e-39
 Identities = 99/246 (40%), Positives = 141/246 (57%), Gaps = 6/246 (2%)
 Frame = -1

Query: 962 EVRNWLDLPQDVMIMIFMKLGVVEILVNAQKVCSSWRKLAKEPQLFRSIVIRDPEKYFRY 783
           E RNWLDLP+DV+  IF KLG  EIL  AQ VCS WR ++KEP L+R+I +R+       
Sbjct: 10  EERNWLDLPRDVLCTIFQKLGATEILTRAQGVCSVWRAISKEPLLWRTIDMRN------- 62

Query: 782 LG------HFTKFAKEVVDRSCGQLVKLSCTYVITKGLVHYIVDQSNLLKSLRLGFEAVI 621
           LG      H        +D S G L+ ++  Y  T  L+H+I   ++ L+SLRL     I
Sbjct: 63  LGDIGLDFHLLAMCHRAIDYSSGHLLHINVEYFGTDDLLHHITHSTSNLRSLRLACCYQI 122

Query: 620 SSNEYIEVFKRLQHLEDLELCLSVFNSKVIEELGRSCQSLKYFHLNLNRGTRHCNGSWDE 441
           S     E+ ++L  LE+L++ +S      +E +G+ C  LK    N+  G R  +   DE
Sbjct: 123 SDEGLCEIAEKLPQLEELDISISNLTKDPLEAIGQCCPHLKTLKFNM-EGYRRPHIECDE 181

Query: 440 EAFVIAKCLPQLRRLCLVESALSNKGLEAILDGCPHIEYLDLQDCVYMDLKGDLLKRCVW 261
           EAF IA+ +P L  L L  + L+N+GL AILDGCP +E LDL+ C  ++L G L KRC  
Sbjct: 182 EAFAIAETMPGLHHLQLFGNKLTNEGLLAILDGCPLLESLDLRQCFNVNLAGSLGKRCAE 241

Query: 260 RKRKLK 243
           + ++L+
Sbjct: 242 QIKELR 247