BLASTX nr result

ID: Coptis21_contig00011966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011966
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21837.3| unnamed protein product [Vitis vinifera]               68   7e-10
ref|XP_002319899.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
gb|ABK94484.1| unknown [Populus trichocarpa] gi|118488375|gb|ABK...    56   3e-06

>emb|CBI21837.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/42 (69%), Positives = 35/42 (83%)
 Frame = +2

Query: 74  MANFERQFKEKARDLKVLFKKSVKIVAASCKKGWYKVKHIKG 199
           MA FE+Q KE+AR+LK  FKK VKIV  SCKKGWYKV+H++G
Sbjct: 330 MAEFEKQLKERARELKTFFKKGVKIVGDSCKKGWYKVRHMRG 371


>ref|XP_002319899.1| predicted protein [Populus trichocarpa] gi|222858275|gb|EEE95822.1|
           predicted protein [Populus trichocarpa]
          Length = 59

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +2

Query: 74  MANFERQFKEKARDLKVLFKKSVKIVAASCKKGWYKVKHI 193
           M +FE+Q KE+A++LKVLF K VKIV  SCKKGW K+  +
Sbjct: 1   MGDFEKQVKERAKELKVLFTKGVKIVENSCKKGWKKISQV 40


>gb|ABK94484.1| unknown [Populus trichocarpa] gi|118488375|gb|ABK96005.1| unknown
           [Populus trichocarpa]
          Length = 43

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +2

Query: 74  MANFERQFKEKARDLKVLFKKSVKIVAASCKKGWYKVKHIK 196
           M +FE + K +A++L VLFKK VKIV  SCKKGW KVK++K
Sbjct: 1   MGDFENKVKVRAKELTVLFKKGVKIVGESCKKGWIKVKNMK 41


Top