BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011964
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21495.3| unnamed protein product [Vitis vinifera]              268   1e-69
ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268...   268   1e-69
ref|XP_002532942.1| conserved hypothetical protein [Ricinus comm...   257   3e-66
gb|AAM62516.1| unknown [Arabidopsis thaliana]                         190   5e-46
ref|NP_201300.1| Mitochondrial transcription termination factor ...   189   6e-46

>emb|CBI21495.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  268 bits (686), Expect = 1e-69
 Identities = 137/278 (49%), Positives = 198/278 (71%), Gaps = 2/278 (0%)
 Frame = -1

Query: 831 LANYLIKNFNFSEPRALSASKRFWWAKNPDNIETVVTLLKQHGFSDAHIENTVKSTPQIL 652
           + NYLI+ F FS+  A S S RFWWAK+ +N ++V+  L+  GFS+AHI  +V+  PQIL
Sbjct: 29  IVNYLIQTFGFSQTLANSISNRFWWAKSTENPQSVIHFLRDLGFSEAHIRTSVRVGPQIL 88

Query: 651 FAKINKTLIPKLKFFQEELGLKDSDLGPFVSKNATLFTQSLERKLIPNTDILLKILSGDR 472
           F+ I+KTL PK++FF E+LGL  +DLG F+SKN+ + T SLE+KL+P  +IL K LS D 
Sbjct: 89  FSDIDKTLKPKVQFF-EQLGLVGADLGKFISKNSKVLTISLEKKLVPCIEILKKTLSDDE 147

Query: 471 KA--LIWIIGKCKWILCKYPKSSLLVNIGLLEKYGIVGSQLSMIVKSRPILLVLEESKLC 298
               LI ++ +C W+L + P+  LL NI  LE  GIVGSQLSM++  +P L V+++S L 
Sbjct: 148 NNGDLIRVLRRCTWVLSRNPEL-LLSNIAFLESCGIVGSQLSMLLTRQPRLFVIKQSTLK 206

Query: 297 DLFRKVERMGFSSKSRMFVHGLFTLSCMSSETIRNKLEVFQSFGYSKEECVGMFRKAPGM 118
           DL  +   MGFS +SRM V+ L+T+SC+  ET+R K E+F+S+G++++EC+ MFR+ PG+
Sbjct: 207 DLVSRAVDMGFSIESRMLVYALYTISCLRDETLRKKFELFRSWGFTEQECIEMFRRTPGL 266

Query: 117 PRVSVEKLRLGLEFFLKGIGFERDVLLRMPRLLMYSME 4
            R S EKL+LG+EFF+  + FE+ +L+  P +LM SME
Sbjct: 267 LRASEEKLKLGMEFFMNTMKFEKTLLVHRPTILMLSME 304


>ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera]
          Length = 388

 Score =  268 bits (686), Expect = 1e-69
 Identities = 137/278 (49%), Positives = 198/278 (71%), Gaps = 2/278 (0%)
 Frame = -1

Query: 831 LANYLIKNFNFSEPRALSASKRFWWAKNPDNIETVVTLLKQHGFSDAHIENTVKSTPQIL 652
           + NYLI+ F FS+  A S S RFWWAK+ +N ++V+  L+  GFS+AHI  +V+  PQIL
Sbjct: 48  IVNYLIQTFGFSQTLANSISNRFWWAKSTENPQSVIHFLRDLGFSEAHIRTSVRVGPQIL 107

Query: 651 FAKINKTLIPKLKFFQEELGLKDSDLGPFVSKNATLFTQSLERKLIPNTDILLKILSGDR 472
           F+ I+KTL PK++FF E+LGL  +DLG F+SKN+ + T SLE+KL+P  +IL K LS D 
Sbjct: 108 FSDIDKTLKPKVQFF-EQLGLVGADLGKFISKNSKVLTISLEKKLVPCIEILKKTLSDDE 166

Query: 471 KA--LIWIIGKCKWILCKYPKSSLLVNIGLLEKYGIVGSQLSMIVKSRPILLVLEESKLC 298
               LI ++ +C W+L + P+  LL NI  LE  GIVGSQLSM++  +P L V+++S L 
Sbjct: 167 NNGDLIRVLRRCTWVLSRNPEL-LLSNIAFLESCGIVGSQLSMLLTRQPRLFVIKQSTLK 225

Query: 297 DLFRKVERMGFSSKSRMFVHGLFTLSCMSSETIRNKLEVFQSFGYSKEECVGMFRKAPGM 118
           DL  +   MGFS +SRM V+ L+T+SC+  ET+R K E+F+S+G++++EC+ MFR+ PG+
Sbjct: 226 DLVSRAVDMGFSIESRMLVYALYTISCLRDETLRKKFELFRSWGFTEQECIEMFRRTPGL 285

Query: 117 PRVSVEKLRLGLEFFLKGIGFERDVLLRMPRLLMYSME 4
            R S EKL+LG+EFF+  + FE+ +L+  P +LM SME
Sbjct: 286 LRASEEKLKLGMEFFMNTMKFEKTLLVHRPTILMLSME 323


>ref|XP_002532942.1| conserved hypothetical protein [Ricinus communis]
           gi|223527293|gb|EEF29446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score =  257 bits (656), Expect = 3e-66
 Identities = 134/279 (48%), Positives = 190/279 (68%), Gaps = 2/279 (0%)
 Frame = -1

Query: 831 LANYLIKNFNFSEPRALSASKRFWWAKNPDNIETVVTLLKQHGFSDAHIENTVKSTPQIL 652
           L +YL+K+  FSE +A + S RF   K+ +  ++V   LK  G S++HI++ +   PQIL
Sbjct: 22  LFHYLLKSLKFSETQAFTISNRFSHIKSTEKPQSVHYFLKNLGLSNSHIQSAIHGAPQIL 81

Query: 651 FAKINKTLIPKLKFFQEELGLKDSDLGPFVSKNATLFTQSLERKLIPNTDILLKILSGDR 472
           FA ++K L PK+K FQ+ LGL   DLG F+SKN+TL T SL++KL P  +IL ++L  D 
Sbjct: 82  FANVDKCLKPKVKLFQD-LGLVGYDLGKFISKNSTLLTASLDKKLSPRVEILKRLLLNDE 140

Query: 471 --KALIWIIGKCKWILCKYPKSSLLVNIGLLEKYGIVGSQLSMIVKSRPILLVLEESKLC 298
             K L+ ++ +C WI+ K PKS LL N+  LE  GIVGSQLSM+++ +P L +++ES L 
Sbjct: 141 NNKDLVKVLTRCNWIISKNPKSRLLSNVAFLESCGIVGSQLSMLLRRQPRLFIMQESALR 200

Query: 297 DLFRKVERMGFSSKSRMFVHGLFTLSCMSSETIRNKLEVFQSFGYSKEECVGMFRKAPGM 118
           DL  +V  MGFS  SRM V+ L+T+SCMS ET   K+E+ + FG+S+ EC  MFRK PG+
Sbjct: 201 DLVSQVLNMGFSVNSRMLVYALYTVSCMSHETFGKKIEILKKFGFSEYECTEMFRKQPGL 260

Query: 117 PRVSVEKLRLGLEFFLKGIGFERDVLLRMPRLLMYSMEK 1
            R S +KL+LGL+FF+  I F+R+VL+  P  LM SME+
Sbjct: 261 LRSSEKKLKLGLDFFINTIKFKREVLVYRPTCLMLSMEE 299


>gb|AAM62516.1| unknown [Arabidopsis thaliana]
          Length = 391

 Score =  190 bits (482), Expect = 5e-46
 Identities = 100/273 (36%), Positives = 171/273 (62%), Gaps = 1/273 (0%)
 Frame = -1

Query: 816 IKNFNFSEPRALSASKRFWWAKNPDNIETVVTLLKQHGFSDAHIENTVKSTPQILFAKIN 637
           +++  F +P A++ + R+   K+ +   +V+ +LK + FSD  I+ +++  P+++F  + 
Sbjct: 45  LRDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVE 104

Query: 636 KTLIPKLKFFQEELGLKDSDLGPFVSKNATLFTQSLERKLIPNTDILLKILSGDRKALIW 457
           K L PKL+FF++ +G   S LG FVS+N+++   SL +KLIP  +IL  I++   + L  
Sbjct: 105 KILEPKLRFFKD-IGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPV 163

Query: 456 IIGKCKWILC-KYPKSSLLVNIGLLEKYGIVGSQLSMIVKSRPILLVLEESKLCDLFRKV 280
           I+ +C W+L  + P   LL NI  LE  GIVGSQL+ +++ +P +  L E KL     + 
Sbjct: 164 ILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRA 223

Query: 279 ERMGFSSKSRMFVHGLFTLSCMSSETIRNKLEVFQSFGYSKEECVGMFRKAPGMPRVSVE 100
             +GF+  SRM VH + +LS +S +T   K+++F + G+S++E   + R++PG+ R S +
Sbjct: 224 LDLGFTLNSRMLVHAIISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSED 283

Query: 99  KLRLGLEFFLKGIGFERDVLLRMPRLLMYSMEK 1
           KL LG EF+LK +G ER+ L + P +L Y++EK
Sbjct: 284 KLTLGFEFYLKRMGIEREALAKRPCVLSYNLEK 316


>ref|NP_201300.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|8843759|dbj|BAA97307.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|332010591|gb|AED97974.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 391

 Score =  189 bits (481), Expect = 6e-46
 Identities = 100/273 (36%), Positives = 171/273 (62%), Gaps = 1/273 (0%)
 Frame = -1

Query: 816 IKNFNFSEPRALSASKRFWWAKNPDNIETVVTLLKQHGFSDAHIENTVKSTPQILFAKIN 637
           +++  F +P A++ + R+   K+ +   +V+ +LK + FSD  I+ +++  P+++F  + 
Sbjct: 45  LRDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVE 104

Query: 636 KTLIPKLKFFQEELGLKDSDLGPFVSKNATLFTQSLERKLIPNTDILLKILSGDRKALIW 457
           K L PKL+FF++ +G   S LG FVS+N+++   SL +KLIP  +IL  I++   + L  
Sbjct: 105 KILEPKLRFFKD-IGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPV 163

Query: 456 IIGKCKWILC-KYPKSSLLVNIGLLEKYGIVGSQLSMIVKSRPILLVLEESKLCDLFRKV 280
           I+ +C W+L  + P   LL NI  LE  GIVGSQL+ +++ +P +  L E KL     + 
Sbjct: 164 ILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRA 223

Query: 279 ERMGFSSKSRMFVHGLFTLSCMSSETIRNKLEVFQSFGYSKEECVGMFRKAPGMPRVSVE 100
             +GF+  SRM VH + +LS +S +T   K+++F + G+S++E   + R++PG+ R S +
Sbjct: 224 LDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSED 283

Query: 99  KLRLGLEFFLKGIGFERDVLLRMPRLLMYSMEK 1
           KL LG EF+LK +G ER+ L + P +L Y++EK
Sbjct: 284 KLTLGFEFYLKRMGLEREALAKRPCVLSYNLEK 316