BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011958
         (1732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   193   1e-46
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   193   1e-46
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   192   2e-46
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   190   9e-46
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   183   1e-43

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  193 bits (491), Expect = 1e-46
 Identities = 137/401 (34%), Positives = 202/401 (50%), Gaps = 37/401 (9%)
 Frame = +2

Query: 266  VGDRLELPGHLLSTIAEKLSGVDDYVRFGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPI 445
            + D  +L   LL  IA+K     DYVRF AVC +WR++ +   P  LP QLP LMLP   
Sbjct: 1    MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRAS-VPKTPHHLPTQLPWLMLPQSQ 59

Query: 446  TRDNQTRSLYDLSRKRVLDFQVP-VPHNRLCRGCSYGWLVTVLENYEVRLLNPFVSIENE 622
                  R  + LS  +    Q+P   H R  RG S+GWL+ + E  E+ LLNP     ++
Sbjct: 60   PHHTH-RPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLT--RSK 116

Query: 623  IHLPPLTAF-EFHDENHGIWGCEY---------------------LRKAVVSANPISNPN 736
            +HLPPL+ F      N    G EY                     ++K ++S++P +  +
Sbjct: 117  VHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSD 176

Query: 737  YAIMAIHGGFNRIAFFKPGDKVWTNLDSTYTLVNDVIYYGYQFYFLDDYGALFGCDLNQP 916
            +  + I      +A  +  D  WT L+   +   DVI++   FY ++ YG++  CD++  
Sbjct: 177  FIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGS 236

Query: 917  HPPKVSRVAPPIGVHGEETKYLVESGGDLLLVVRTRRYHENTYS-----------SIGFV 1063
             P +VS +  P    G + +YLVESG +LLLV R   Y + TY            +  F 
Sbjct: 237  SP-RVSIIEMP-QQFGGDLQYLVESGEELLLVTR---YLDLTYDVEPDQTSLIYRTTRFQ 291

Query: 1064 VYKLNTNEHKWTEVKSLLGLSMFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASD 1243
            V +L+    +W  V SL   ++F+G+N S SL + DFPGCK NCIY+TDD+ E  Y+   
Sbjct: 292  VCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG 351

Query: 1244 RGVGPHDIGVFNLEDCSFEAHYPVECA---MIIPAPIWIEP 1357
               G  D+G+FNLED S E   P+ C+   +  P P+W+ P
Sbjct: 352  ---GEQDLGIFNLEDGSIE---PLPCSHFRIRWPPPLWVTP 386


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  193 bits (491), Expect = 1e-46
 Identities = 137/401 (34%), Positives = 203/401 (50%), Gaps = 37/401 (9%)
 Frame = +2

Query: 266  VGDRLELPGHLLSTIAEKLSGVDDYVRFGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPI 445
            + D  +L   LL  IA+K     DYVRF AVC +WR++ +   P  LP QLP LMLP   
Sbjct: 1    MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRAS-VPKTPHHLPTQLPWLMLPQSQ 59

Query: 446  TRDNQTRSLYDLSRKRVLDFQVP-VPHNRLCRGCSYGWLVTVLENYEVRLLNPFVSIENE 622
                  R  + LS  +    Q+P   H R  RG S+GWL+ + E  E+ LLNP     ++
Sbjct: 60   PHHTH-RPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLT--RSK 116

Query: 623  IHLPPLTAF-EFHDENHGIWGCEY---------------------LRKAVVSANPISNPN 736
            +HLPPL+ F      N    G EY                     ++K ++S++P +  +
Sbjct: 117  VHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSD 176

Query: 737  YAIMAIHGGFNRIAFFKPGDKVWTNLDSTYTLVNDVIYYGYQFYFLDDYGALFGCDLNQP 916
            +  + I      +A  +  D  WT L+   +   DVI++   FY ++ YG++  CD++  
Sbjct: 177  FIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGS 236

Query: 917  HPPKVSRVAPPIGVHGEETKYLVESGGDLLLVVRTRRYHENTYS-----------SIGFV 1063
             P +VS +  P    G + +YLVESG +LLLV R   Y + TY            +  F 
Sbjct: 237  SP-RVSIIEMP-QQFGGDLQYLVESGEELLLVTR---YLDLTYDVEXDQTSLIYRTTRFQ 291

Query: 1064 VYKLNTNEHKWTEVKSLLGLSMFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASD 1243
            V +L++   +W  V SL   ++F+G+N S SL + DFPGCK NCIY+TDD+ E  Y+   
Sbjct: 292  VCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG 351

Query: 1244 RGVGPHDIGVFNLEDCSFEAHYPVECA---MIIPAPIWIEP 1357
               G  D+G+FNLED S E   P+ C+   +  P P+W+ P
Sbjct: 352  ---GEQDLGIFNLEDGSIE---PLPCSHFRIRWPPPLWVTP 386


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  192 bits (488), Expect = 2e-46
 Identities = 130/381 (34%), Positives = 199/381 (52%), Gaps = 16/381 (4%)
 Frame = +2

Query: 266  VGDRLELPGHLLSTIAEKLSGVDDYVRFGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPI 445
            + D  ++P   L  IAEKL  V+DYVRFG VCKSW S + + +  C   + P LML    
Sbjct: 919  MADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPWLMLAEK- 977

Query: 446  TRDNQTRSLYDLSRKRVLDFQVPVPHNRLCRGCSYGWLVTVLENYEVRLLNPFVSIENEI 625
              +++ R  Y     +V + ++P    + C G  YGWLVT+  + ++ LLNP   ++  I
Sbjct: 978  -ENSEIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQ--I 1034

Query: 626  HLPPLTAFE-----FHDENHGIWGCE-YLRKAVVSANPISNPNYAIMAIHGGFNRIAFFK 787
             LP L A             G    + ++ KAV+S+ P S+P+ A+M I+  + R+AF K
Sbjct: 1035 LLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAP-SSPDCAVMIIYSDYGRLAFTK 1093

Query: 788  PGDKVWTNLDSTYTLVNDVIYYGYQFYFLDDYGALFGCDLNQPHPPKVSRVAPP----IG 955
            PG + WT L+S    V+D+IY+   F  ++    ++ CD++      +   A P    + 
Sbjct: 1094 PGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPALQDVD 1153

Query: 956  VHGEETKYLVESGGDLLLVVR----TRRYHENTYSSIGFVVYKLNTNEHKWTEVKSLLGL 1123
                E KYLVESGG++ +V R    T R       +  F V KL+    +W EV++L   
Sbjct: 1154 EIEYEAKYLVESGGEIYMVTRNLYDTARRDIPYMRTWTFSVLKLDMCNKRWEEVENLDHC 1213

Query: 1124 SMFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASDRGVGPHDIGVFNLEDCSFEA 1303
            S F+G+N SFS  ASD+P  + N IYFTDD+  G+           D+G++N ++   E 
Sbjct: 1214 SFFLGNNHSFSTWASDYPEFRKNSIYFTDDYC-GFLNIPRN----FDMGIYNFQNTQIE- 1267

Query: 1304 HYPV--ECAMIIPAPIWIEPT 1360
            HYPV  +   +  AP+WI P+
Sbjct: 1268 HYPVGHDALSMFSAPLWIRPS 1288


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  190 bits (483), Expect = 9e-46
 Identities = 127/398 (31%), Positives = 203/398 (51%), Gaps = 36/398 (9%)
 Frame = +2

Query: 272  DRLELPGHLLSTIAEKLSGVDDYVRFGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPITR 451
            D  +LP  L+  I++K++   DY+ F AVC +W+S+ +   P  LP QLP L+LP   + 
Sbjct: 4    DWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSS-IPKTPNHLPPQLPWLLLPQSQSN 62

Query: 452  DNQTRSLYDLSRKRVLDFQVP-VPHNRLCRGCSYGWLVTVLENYEVRLLNPFVSIENEIH 628
             +  R+ ++LS  +     +P   H +   G S+GWL+ + ++  + ++NP      +IH
Sbjct: 63   QSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLT--RRKIH 120

Query: 629  LPPLTAF-EFHDENHGIWGCEYL---------------------RKAVVSANPISNPN-- 736
            LP +++F      ++   G EYL                     +K V+S++P+      
Sbjct: 121  LPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGDF 180

Query: 737  YAIMAIHGGFNRIAFFKPGDKVWTNLDSTYTLVNDVIYYGYQFYFLDDYGALFGCDLNQP 916
            +  MAI      +A+ K GD+ W  ++++ +   DVIY+   FY ++  G +  CD+N  
Sbjct: 181  FVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNG- 239

Query: 917  HPPKVSRVAPPIGVHGEETKYLVESGGDLLLVVRTR----RYHENTYSSIGFVVYKLNTN 1084
            + PKVS +  P  + G+  +YLV SG  LLLV R       +    Y +  F V+KL+ N
Sbjct: 240  NSPKVSFIETPRQIGGD-MQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLN 298

Query: 1085 EHKWTEVKSLLGLSMFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASDRGVGPHD 1264
              +W  V SL  + +FIG+NSS +L AS   GC  +CIY+TDD+    Y   D  +G HD
Sbjct: 299  GPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNY---DGHIGEHD 355

Query: 1265 IGVFNLEDCSFEAHYPVEC-------AMIIPAPIWIEP 1357
            +G+F L D S E   P+ C        +  P P+WI P
Sbjct: 356  LGIFKLSDGSIE---PLPCYPRNSYSRLQWPPPLWISP 390


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  183 bits (464), Expect = 1e-43
 Identities = 127/403 (31%), Positives = 206/403 (51%), Gaps = 41/403 (10%)
 Frame = +2

Query: 272  DRLELPGHLLSTIAEKLSGVDDYVRFGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPITR 451
            D  +LP  L+  I++ L+   DY+   AVC +WR + +   P  LP QLP LMLP   ++
Sbjct: 4    DWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFS-IPKTPNHLPPQLPWLMLPQSQSQ 62

Query: 452  DNQTR-SLYDLSRKRVLDFQVP-VPHNRLCRGCSYGWLVTVLENYEVRLLNPFVSIENEI 625
             NQ+R + + LS  +     +P V + +   G S+GWL+ + +   + L+NP    +  +
Sbjct: 63   SNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAK--L 120

Query: 626  HLPPLTAF-EFHDENHGIWGCEY---------------------LRKAVVSANPISNPNY 739
             LPPL++F      N+   G EY                     +RK V+S++P+ + N+
Sbjct: 121  SLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKDNNF 180

Query: 740  AIMAIHGGFNRIAFFKPGDKVWTNLDSTYTLVNDVIYYGYQFYFLDDYGALFGCDLNQPH 919
             ++AI    + +A+ + GDK W+ +++  +   DVI+    FY ++  G +  CD++   
Sbjct: 181  VVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDS 240

Query: 920  PPKVSRVAPPIGVHGEETKYLVESGGDLLLVVRTRRYHEN----------TYSSIGFVVY 1069
            P +VS +  P    G+  +YLV SG +LLLV R                  Y +I F V+
Sbjct: 241  P-RVSFMETPRQAGGD-MQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVF 298

Query: 1070 KLNTNEHKWTEVKSLLGLSMFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASDRG 1249
            +L+ N  +W  + +L   ++FIG+NSS SL A+DF GC  NCIY+TDD+L+  Y   D  
Sbjct: 299  RLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANY---DGH 355

Query: 1250 VGPHDIGVFNLEDCSFEAHYPVEC-------AMIIPAPIWIEP 1357
             G HD+G+F L D + E   P+ C        +    P+W+ P
Sbjct: 356  FGDHDLGIFKLCDETIE---PLPCYPRNFTSPLQWSPPLWVSP 395