BLASTX nr result

ID: Coptis21_contig00011952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011952
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21951.3| unnamed protein product [Vitis vinifera]              122   2e-26
ref|XP_002279537.1| PREDICTED: uncharacterized protein HI_0077-l...   122   2e-26
ref|XP_002326023.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_003540390.1| PREDICTED: uncharacterized protein HI_0077-l...   108   6e-22
ref|XP_004165196.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   106   2e-21

>emb|CBI21951.3| unnamed protein product [Vitis vinifera]
          Length = 302

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/79 (74%), Positives = 67/79 (84%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3   MGRVPCSTFRDLLKEYDVELKGPFNYLARNEAGLPRDWYDSSSVD--KQGKTEQLSEVYE 176
           MGR PCSTF+DLLKEY+VELKGPFNY AR+EAG+PRDWYD+SS    KQ K+E LSEVYE
Sbjct: 223 MGRAPCSTFKDLLKEYNVELKGPFNYSARDEAGIPRDWYDTSSTSEVKQDKSEPLSEVYE 282

Query: 177 RLASVISMEKENSSMNSDP 233
           RLA +ISME ENSS+N  P
Sbjct: 283 RLACIISMENENSSLNRPP 301


>ref|XP_002279537.1| PREDICTED: uncharacterized protein HI_0077-like [Vitis vinifera]
          Length = 381

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/79 (74%), Positives = 67/79 (84%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3   MGRVPCSTFRDLLKEYDVELKGPFNYLARNEAGLPRDWYDSSSVD--KQGKTEQLSEVYE 176
           MGR PCSTF+DLLKEY+VELKGPFNY AR+EAG+PRDWYD+SS    KQ K+E LSEVYE
Sbjct: 302 MGRAPCSTFKDLLKEYNVELKGPFNYSARDEAGIPRDWYDTSSTSEVKQDKSEPLSEVYE 361

Query: 177 RLASVISMEKENSSMNSDP 233
           RLA +ISME ENSS+N  P
Sbjct: 362 RLACIISMENENSSLNRPP 380


>ref|XP_002326023.1| predicted protein [Populus trichocarpa] gi|222862898|gb|EEF00405.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 7/81 (8%)
 Frame = +3

Query: 3   MGRVPCSTFR-DLLKEYDVELKGPFNYLARNEAGLPRDWYDSSSVDKQGKT------EQL 161
           MGR PCSTF+ DLL+EY+VELKGPFNY AR+EAG+PRDWYD SS +KQ +       E+L
Sbjct: 260 MGRAPCSTFKVDLLREYNVELKGPFNYSARDEAGIPRDWYDKSSTNKQDEVTKPNTPEKL 319

Query: 162 SEVYERLASVISMEKENSSMN 224
           S VYERLAS+I+ME EN+S+N
Sbjct: 320 SVVYERLASIIAMETENASLN 340


>ref|XP_003540390.1| PREDICTED: uncharacterized protein HI_0077-like [Glycine max]
          Length = 389

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 7/81 (8%)
 Frame = +3

Query: 15  PCSTFRDLLKEYDVELKGPFNYLARNEAGLPRDWYDSSS-------VDKQGKTEQLSEVY 173
           P STF+DLLKEY+VELKGPFNY AR+EAG+PRDWYD +S        DK G  EQLS VY
Sbjct: 309 PDSTFKDLLKEYNVELKGPFNYSARDEAGIPRDWYDDASSTSIKDKKDKDGNQEQLSAVY 368

Query: 174 ERLASVISMEKENSSMNSDPQ 236
           +RLAS+I+MEKENSS+   P+
Sbjct: 369 KRLASIIAMEKENSSLTKPPE 389


>ref|XP_004165196.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           HI_0077-like [Cucumis sativus]
          Length = 386

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 6/80 (7%)
 Frame = +3

Query: 3   MGRVPCSTFRDLLKEYDVELKGPFNYLARNEAGLPRDWYDSSSVDKQG------KTEQLS 164
           M R PCSTF++LLKEY VELKGPFNY AR+EAGLPRDWYD S+ + Q       K EQLS
Sbjct: 303 MERAPCSTFKELLKEYSVELKGPFNYSARDEAGLPRDWYDISNTNVQDELSGDTKNEQLS 362

Query: 165 EVYERLASVISMEKENSSMN 224
            VY+RLASVISME +NSS++
Sbjct: 363 VVYDRLASVISMECKNSSLH 382


Top