BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011940
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   292   5e-77
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   285   6e-75
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   274   1e-71
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...   263   2e-68
emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]   248   8e-64

>ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g02650, mitochondrial-like [Vitis vinifera]
          Length = 509

 Score =  292 bits (747), Expect = 5e-77
 Identities = 140/224 (62%), Positives = 178/224 (79%)
 Frame = -3

Query: 674 SLESSLNKLDVTINEDFMVRVIETPLVPGDSLIRFYKWGLKRYKLKTSTRLVDSLVRAFG 495
           SLESS N + +++NE+F+VRV+ETP VP ++LI F+KW  K      +TR VD+LVRA  
Sbjct: 136 SLESSFNAMGLSLNEEFVVRVLETPFVPANNLIGFFKWSWKNPGFSVTTRAVDALVRAVC 195

Query: 494 TGIIRKRDVYALWDLVKEIGENDVGVLSTGILNQVISLFWKLGKGKAALEVLNKFEDFVC 315
             + R++D Y+LWDLVKEIGE + GVL+ GILN++I+ F KLGKGKA LEV N F ++ C
Sbjct: 196 QSV-RRKDTYSLWDLVKEIGEKENGVLNVGILNELIAQFAKLGKGKAGLEVFNAFGEYGC 254

Query: 314 EPNVDSYYLTIEALCRRSIYDWAWPVCKKMLNAGDLPDSKKIGSIISSFCKGNKAKDAHL 135
           EPN DSYY TIEALCRRSI+DWA  VC+KMLNA  LPDS+K+ +IIS FCKG K KDA+L
Sbjct: 255 EPNADSYYFTIEALCRRSIFDWALSVCEKMLNASSLPDSEKVWNIISWFCKGRKVKDAYL 314

Query: 134 VYLMAKEKNKCPPRTVVNFLITSLCKEDDTVKLALELLNDFSGD 3
           VYL+AKEKNK PP+T VNFLI SLC+ED T+ +A+E+L+DFSG+
Sbjct: 315 VYLLAKEKNKYPPKTTVNFLIASLCREDGTISMAVEMLDDFSGE 358


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  285 bits (729), Expect = 6e-75
 Identities = 134/226 (59%), Positives = 179/226 (79%)
 Frame = -3

Query: 680 DASLESSLNKLDVTINEDFMVRVIETPLVPGDSLIRFYKWGLKRYKLKTSTRLVDSLVRA 501
           D SLES+L+   + ++E+F+V+V+ETP V G++LIRF+KW +K+  L  +TR +D LV +
Sbjct: 44  DGSLESTLDTFSLDLHEEFVVKVLETPHVLGENLIRFFKWAMKKQDLSVTTRAIDVLVSS 103

Query: 500 FGTGIIRKRDVYALWDLVKEIGENDVGVLSTGILNQVISLFWKLGKGKAALEVLNKFEDF 321
             +  +R+++ YALWDLV+EIGE + G++S G LNQ+I+L  KLGKGKAALEV +K +DF
Sbjct: 104 ICSSELRRKNAYALWDLVREIGEKNEGLVSVGSLNQLIALLSKLGKGKAALEVFDKSKDF 163

Query: 320 VCEPNVDSYYLTIEALCRRSIYDWAWPVCKKMLNAGDLPDSKKIGSIISSFCKGNKAKDA 141
            C P+ ++YY TIEALCRRS YDWAW VC+KML+ G LPDS+KIG II  FCKG+KAKDA
Sbjct: 164 GCVPDSETYYYTIEALCRRSFYDWAWIVCEKMLDQGPLPDSEKIGKIICWFCKGSKAKDA 223

Query: 140 HLVYLMAKEKNKCPPRTVVNFLITSLCKEDDTVKLALELLNDFSGD 3
           H VYL+AKEK+KCPP+  + FLI SLC++D TV LALE+LNDF G+
Sbjct: 224 HKVYLLAKEKSKCPPKPALYFLIGSLCRDDGTVNLALEMLNDFEGE 269


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  274 bits (700), Expect = 1e-71
 Identities = 137/225 (60%), Positives = 180/225 (80%)
 Frame = -3

Query: 680 DASLESSLNKLDVTINEDFMVRVIETPLVPGDSLIRFYKWGLKRYKLKTSTRLVDSLVRA 501
           DASLESSL+ +D+ ++EDF+V+V+ETPL+ GD+LI+F+ W +K+  +  +TRLV  LVRA
Sbjct: 153 DASLESSLDNMDLHLHEDFIVKVLETPLIVGDNLIKFFNWAIKQPDINVTTRLVHPLVRA 212

Query: 500 FGTGIIRKRDVYALWDLVKEIGENDVGVLSTGILNQVISLFWKLGKGKAALEVLNKFEDF 321
             + + RK+D YALWDLVK+IGE +  VL+  +LNQ+I+LF KLGKGKAA EV NKF DF
Sbjct: 213 ICSEL-RKKDAYALWDLVKDIGEEENTVLNVDLLNQLIALFSKLGKGKAAFEVFNKFGDF 271

Query: 320 VCEPNVDSYYLTIEALCRRSIYDWAWPVCKKMLNAGDLPDSKKIGSIISSFCKGNKAKDA 141
            C P+ ++Y+ TIEALCRRSI+DWA  V +KML A  LPD++KIG II  FCKG+KA DA
Sbjct: 272 GCVPDSETYHYTIEALCRRSIFDWASSVREKMLRAEALPDTEKIGKIICWFCKGDKANDA 331

Query: 140 HLVYLMAKEKNKCPPRTVVNFLITSLCKEDDTVKLALELLNDFSG 6
           +LVYL+AKEKNK PP+  VNFLI  LC++++TVKLALE+L+ FSG
Sbjct: 332 YLVYLLAKEKNKYPPQPSVNFLIGLLCQKNETVKLALEMLDAFSG 376


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
           gi|449477884|ref|XP_004155152.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
          Length = 479

 Score =  263 bits (672), Expect = 2e-68
 Identities = 128/226 (56%), Positives = 175/226 (77%), Gaps = 1/226 (0%)
 Frame = -3

Query: 683 LDASLESSLNKLDVTINEDFMVRVIETPLVPGDSLIRFYKWGLKRY-KLKTSTRLVDSLV 507
           +D S ESSL+++ +T+NEDF+++VIETP + G++LIRF++W +  + + + ST +VD LV
Sbjct: 45  VDGSFESSLDEMRLTLNEDFVLKVIETPHILGENLIRFFRWAVNSHPEFEVSTPVVDVLV 104

Query: 506 RAFGTGIIRKRDVYALWDLVKEIGENDVGVLSTGILNQVISLFWKLGKGKAALEVLNKFE 327
           R     + R+R  Y+LW+L+KEIG     +L+  ILNQ+I+ F KLGKGKAALEVLN +E
Sbjct: 105 RVVCANL-RQRVAYSLWELIKEIGGKQTSLLNAEILNQLIAFFSKLGKGKAALEVLNSYE 163

Query: 326 DFVCEPNVDSYYLTIEALCRRSIYDWAWPVCKKMLNAGDLPDSKKIGSIISSFCKGNKAK 147
              C PN +SYY T+EALCRRS YD AWPVC+KML++G +P+S ++G IIS FCKGNKAK
Sbjct: 164 VLGCVPNAESYYFTVEALCRRSSYDLAWPVCEKMLDSGSMPESNRVGKIISLFCKGNKAK 223

Query: 146 DAHLVYLMAKEKNKCPPRTVVNFLITSLCKEDDTVKLALELLNDFS 9
           +AH VYL+AKEK+   P+  +N LI SLC++D+TVKLALE+LNDFS
Sbjct: 224 NAHSVYLLAKEKHVNLPQCYMNILIHSLCRDDETVKLALEMLNDFS 269


>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score =  248 bits (633), Expect = 8e-64
 Identities = 125/224 (55%), Positives = 163/224 (72%)
 Frame = -3

Query: 674 SLESSLNKLDVTINEDFMVRVIETPLVPGDSLIRFYKWGLKRYKLKTSTRLVDSLVRAFG 495
           SLESS N + +++NE+F+VRV+ETP VP ++LI F+KW  K      +TR VD+LVRA  
Sbjct: 136 SLESSFNAMGLSLNEEFVVRVLETPFVPANNLIGFFKWSWKNPGFSVTTRAVDALVRAVC 195

Query: 494 TGIIRKRDVYALWDLVKEIGENDVGVLSTGILNQVISLFWKLGKGKAALEVLNKFEDFVC 315
             + R++D Y+LWDLVKEIGE + GVL+ GILN++I+ F KLGKGKA LEV N F ++  
Sbjct: 196 QSV-RRKDTYSLWDLVKEIGEKENGVLNVGILNELIAQFAKLGKGKAGLEVFNAFGEY-- 252

Query: 314 EPNVDSYYLTIEALCRRSIYDWAWPVCKKMLNAGDLPDSKKIGSIISSFCKGNKAKDAHL 135
                           RSI+DWA  VC+KMLNA  LPDS+K+ +IIS FCKG K KDA+L
Sbjct: 253 ---------------GRSIFDWALSVCEKMLNASSLPDSEKVWNIISWFCKGRKVKDAYL 297

Query: 134 VYLMAKEKNKCPPRTVVNFLITSLCKEDDTVKLALELLNDFSGD 3
           VYL+AKEKNK PP+T VNFLI SLC+ED T+ +A+E+L+DFSG+
Sbjct: 298 VYLLAKEKNKYPPKTTVNFLIASLCREDGTISMAVEMLDDFSGE 341