BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011939
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]         330   3e-88
ref|XP_002527284.1| Photosystem I reaction center subunit XI, ch...   323   2e-86
ref|XP_002303024.1| predicted protein [Populus trichocarpa] gi|2...   317   2e-84
ref|XP_002320562.1| hypothetical protein POPTRDRAFT_732598 [Popu...   316   4e-84
gb|ACG24344.1| photosystem I reaction center subunit XI [Zea mays]    309   6e-82

>gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]
          Length = 220

 Score =  330 bits (845), Expect = 3e-88
 Identities = 163/217 (75%), Positives = 179/217 (82%), Gaps = 2/217 (0%)
 Frame = +1

Query: 109 AASPIASQLKSNFTSSITRG--LVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVV 282
           AASP+ASQLKS F SS+TRG  LV+PKGISG+PFK+ PS R+SCF +KA+Q DKPTYQV+
Sbjct: 4   AASPMASQLKSKFASSLTRGSGLVTPKGISGSPFKIFPSTRKSCFTIKAVQTDKPTYQVI 63

Query: 283 QPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFLLVGPFVKT 462
           QP+NGDPFIGSLETPVTSSPLIAWYLSNLP YRTAVNPLLRGVEVGLAHGFLLVGPFVK 
Sbjct: 64  QPLNGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKA 123

Query: 463 GPLRNTEYXXXXXXXXXXXXXXXXSICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQ 642
           GPLRNTEY                S+CLTIYGI+SF EGE STAPALTLTGRKK PDQLQ
Sbjct: 124 GPLRNTEYAGGAGSLAAAGLVVILSMCLTIYGISSFKEGEASTAPALTLTGRKKVPDQLQ 183

Query: 643 TADGWAKXXXXXXXXXISGVTWAFFLLYVLNLPYYVK 753
           TA+GW+K         ISGVTWA+FLLYVL+LPYYVK
Sbjct: 184 TAEGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYYVK 220


>ref|XP_002527284.1| Photosystem I reaction center subunit XI, chloroplast precursor,
           putative [Ricinus communis] gi|223533377|gb|EEF35128.1|
           Photosystem I reaction center subunit XI, chloroplast
           precursor, putative [Ricinus communis]
          Length = 218

 Score =  323 bits (829), Expect = 2e-86
 Identities = 158/214 (73%), Positives = 178/214 (83%)
 Frame = +1

Query: 112 ASPIASQLKSNFTSSITRGLVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVVQPI 291
           ASP+ASQLKS+F SS+TRGL  P+GISG PF+V P++R + F VKAIQ++KPT+QV+QPI
Sbjct: 5   ASPMASQLKSSFASSVTRGLGVPRGISGNPFRVSPAKRATSFTVKAIQSEKPTFQVIQPI 64

Query: 292 NGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFLLVGPFVKTGPL 471
           NGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFLLVGPFVK GPL
Sbjct: 65  NGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGPL 124

Query: 472 RNTEYXXXXXXXXXXXXXXXXSICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQTAD 651
           RNTE+                SICLT+YG+ASFNEGEPSTAP+LTLTGRKKEPDQLQTAD
Sbjct: 125 RNTEFAGAAGSLAAGGLVAILSICLTMYGVASFNEGEPSTAPSLTLTGRKKEPDQLQTAD 184

Query: 652 GWAKXXXXXXXXXISGVTWAFFLLYVLNLPYYVK 753
           GWAK         ISGV WA+FLLYVLNLPY+VK
Sbjct: 185 GWAKFTGGFFFGGISGVIWAYFLLYVLNLPYFVK 218


>ref|XP_002303024.1| predicted protein [Populus trichocarpa] gi|222844750|gb|EEE82297.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  317 bits (813), Expect = 2e-84
 Identities = 159/215 (73%), Positives = 174/215 (80%)
 Frame = +1

Query: 109 AASPIASQLKSNFTSSITRGLVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVVQP 288
           AASP+ASQLKS+F SS+ R LV P  ISGAPF+V PS+R   F VKAIQ++KPTYQVVQP
Sbjct: 4   AASPMASQLKSSFASSLARRLVIPTAISGAPFRVSPSKRS--FTVKAIQSEKPTYQVVQP 61

Query: 289 INGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFLLVGPFVKTGP 468
           INGDPFIGSLETP+TSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFLLVGPFVK GP
Sbjct: 62  INGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGP 121

Query: 469 LRNTEYXXXXXXXXXXXXXXXXSICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQTA 648
           LRNTEY                SICLT+YG+ASF EGEPSTAP LTLTGRKKEPDQLQT+
Sbjct: 122 LRNTEYAGAAGSLAAGGLVAILSICLTMYGVASFTEGEPSTAPGLTLTGRKKEPDQLQTS 181

Query: 649 DGWAKXXXXXXXXXISGVTWAFFLLYVLNLPYYVK 753
           DGWAK         ISGV WA+FLLYV+NLPYYVK
Sbjct: 182 DGWAKFSGGFFFGGISGVIWAYFLLYVINLPYYVK 216


>ref|XP_002320562.1| hypothetical protein POPTRDRAFT_732598 [Populus trichocarpa]
           gi|118487151|gb|ABK95404.1| unknown [Populus
           trichocarpa] gi|118488447|gb|ABK96038.1| unknown
           [Populus trichocarpa] gi|222861335|gb|EEE98877.1|
           hypothetical protein POPTRDRAFT_732598 [Populus
           trichocarpa]
          Length = 216

 Score =  316 bits (810), Expect = 4e-84
 Identities = 160/214 (74%), Positives = 173/214 (80%)
 Frame = +1

Query: 112 ASPIASQLKSNFTSSITRGLVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVVQPI 291
           ASP+ASQLKS+  SS+ R LV P+GISGAPF+V P++R   F VKA+QADKPTYQVVQPI
Sbjct: 5   ASPMASQLKSSLASSLGRRLVIPRGISGAPFRVSPNKRS--FTVKAVQADKPTYQVVQPI 62

Query: 292 NGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFLLVGPFVKTGPL 471
           NGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFLLVGPFVK GPL
Sbjct: 63  NGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGPL 122

Query: 472 RNTEYXXXXXXXXXXXXXXXXSICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQTAD 651
           RNTEY                SICLT+YG ASF EGEPS AP+LTLTGRKK PDQLQTAD
Sbjct: 123 RNTEYAGAAGSLAAGGLIVILSICLTMYGAASFTEGEPSIAPSLTLTGRKKVPDQLQTAD 182

Query: 652 GWAKXXXXXXXXXISGVTWAFFLLYVLNLPYYVK 753
           GWAK         ISGVTWAFFLLYV+NLPYYVK
Sbjct: 183 GWAKFTGGFFFGGISGVTWAFFLLYVINLPYYVK 216


>gb|ACG24344.1| photosystem I reaction center subunit XI [Zea mays]
          Length = 219

 Score =  309 bits (791), Expect = 6e-82
 Identities = 155/217 (71%), Positives = 177/217 (81%), Gaps = 1/217 (0%)
 Frame = +1

Query: 106 AAASPIASQLKSNFTS-SITRGLVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVV 282
           A+ASP+ASQL+S+F+S S+++ L  PKGISGAPF V P++R S F V+A+++DK T+QVV
Sbjct: 3   ASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVV 62

Query: 283 QPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFLLVGPFVKT 462
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGF LVGPFVK 
Sbjct: 63  QPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKA 122

Query: 463 GPLRNTEYXXXXXXXXXXXXXXXXSICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQ 642
           GPLRNT Y                S+CLTIYGI+SF EGEPS AP+LTLTGRKK+PDQLQ
Sbjct: 123 GPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQ 182

Query: 643 TADGWAKXXXXXXXXXISGVTWAFFLLYVLNLPYYVK 753
           TADGWAK         ISGVTWA+FLLYVL+LPY+VK
Sbjct: 183 TADGWAKFTRGFFFGGISGVTWAYFLLYVLDLPYFVK 219