BLASTX nr result
ID: Coptis21_contig00011935
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00011935
(1083 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269178.1| PREDICTED: cysteine and histidine-rich domai... 306 6e-81
gb|AAM62409.1|AF480487_1 Rar1 [Nicotiana tabacum] 305 1e-80
gb|ABK94029.1| unknown [Populus trichocarpa] 305 1e-80
gb|ACU14236.1| unknown [Glycine max] 300 4e-79
ref|NP_001236558.1| RAR1 protein [Glycine max] gi|208964716|gb|A... 300 5e-79
>ref|XP_002269178.1| PREDICTED: cysteine and histidine-rich domain-containing protein
RAR1-like [Vitis vinifera]
Length = 219
Score = 306 bits (784), Expect = 6e-81
Identities = 139/217 (64%), Positives = 155/217 (71%), Gaps = 1/217 (0%)
Frame = +2
Query: 86 KVRCQRIGCDATFTEDDNPDDSCTYHASGPIFHDGKKEWSCCHQKSHDFSLFLALPGCKT 265
KVRCQR+GCD F+ DDNPDDSC YH SGP FHDG KEWSCC ++SHDFSLFLA+PGCKT
Sbjct: 7 KVRCQRMGCDVMFSPDDNPDDSCQYHDSGPFFHDGMKEWSCCKKRSHDFSLFLAIPGCKT 66
Query: 266 GKHTTEKPVITK-AVSTTMKPIPSPLDXXXXXXXXXXXXQGFFCSEHGSQPKEENSKXXX 442
GKHTTEKPV+ K A P P+P QGFFCSEHGSQ +E+ +
Sbjct: 67 GKHTTEKPVLAKPAPPKNQVPAPAPAPDASSKQTCSRCQQGFFCSEHGSQAREKRLQTDL 126
Query: 443 XXXXXXXXXXXXLKHDPAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTACSYHPGPAVF 622
AP KKIV +N+PQTC NKGCG TFKEKDNHDTACSYHPGPAVF
Sbjct: 127 PAENNTGVQEGLA----APAKKIVDINQPQTCGNKGCGMTFKEKDNHDTACSYHPGPAVF 182
Query: 623 HDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDSVS 733
HDR+RGWKCCDIHVKEFDEF+ IPPC KGWHN++ S
Sbjct: 183 HDRLRGWKCCDIHVKEFDEFMSIPPCTKGWHNANPAS 219
>gb|AAM62409.1|AF480487_1 Rar1 [Nicotiana tabacum]
Length = 221
Score = 305 bits (782), Expect = 1e-80
Identities = 137/221 (61%), Positives = 159/221 (71%), Gaps = 3/221 (1%)
Frame = +2
Query: 80 MEKVRCQRIGCDATFTEDDNPDDSCTYHASGPIFHDGKKEWSCCHQKSHDFSLFLALPGC 259
ME++RCQRIGC+ATFTEDDNP++SCTYH SGP+FHDG K+WSCC + SHDFSLFL +PGC
Sbjct: 1 MERLRCQRIGCNATFTEDDNPENSCTYHESGPLFHDGMKKWSCCKKSSHDFSLFLEIPGC 60
Query: 260 KTGKHTTEKPVITKAVSTTMKPIPSPLDXXXXXXXXXXXX--QGFFCSEHGSQPKEENSK 433
K GKHTTEKPVI + + IP+P QGFFCS+HGSQP+E K
Sbjct: 61 KIGKHTTEKPVIANPAANRNRAIPAPTSTTNVSPKEACPRCRQGFFCSDHGSQPREVIPK 120
Query: 434 XXXXXXXXXXXXXXXLKH-DPAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTACSYHPG 610
++ PAPVKK V +NEPQ C+NKGCGKTF EK+NHDTACSYHPG
Sbjct: 121 ASNTVTSVPSESNTDIQQCHPAPVKKKVDINEPQICKNKGCGKTFTEKENHDTACSYHPG 180
Query: 611 PAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDSVS 733
PA+FHDRMRGWKCCDIHVKEFDEF+ I PC GWHN+ S
Sbjct: 181 PAIFHDRMRGWKCCDIHVKEFDEFMSISPCTTGWHNASPAS 221
>gb|ABK94029.1| unknown [Populus trichocarpa]
Length = 215
Score = 305 bits (781), Expect = 1e-80
Identities = 138/229 (60%), Positives = 164/229 (71%), Gaps = 8/229 (3%)
Frame = +2
Query: 71 KSRMEKVRCQRIGCDATFTEDDNPDDSCTYHASGPIFHDGKKEWSCCHQKSHDFSLFLAL 250
++ + K+RCQRIGCDATFTED+NPD SCTYH SGP FHDG KEWSCC ++SHDFSLFL +
Sbjct: 3 QTEVPKLRCQRIGCDATFTEDNNPDGSCTYHDSGPFFHDGMKEWSCCKKRSHDFSLFLEI 62
Query: 251 PGCKTGKHTTEKPVITKAVSTTMK------PIPSPLDXXXXXXXXXXXXQGFFCSEHGSQ 412
PGCKTGKHTTEKPV+ KA T P +P QGFFCS+HGSQ
Sbjct: 63 PGCKTGKHTTEKPVLAKATPTPTPKNPFSPPTAAPATNSSSKESCPRCKQGFFCSDHGSQ 122
Query: 413 --PKEENSKXXXXXXXXXXXXXXXLKHDPAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHD 586
PK +K + AP KK+V +N+PQTC+N+GCG+TFKEKDNH+
Sbjct: 123 AQPKAAPAK----------------SYASAPAKKVVDINQPQTCKNQGCGQTFKEKDNHE 166
Query: 587 TACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDSVS 733
TAC+YHPGPAVFHDRMRGWKCCDIHVKEFDEF+ +PPC+KGWH++D S
Sbjct: 167 TACNYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSVPPCSKGWHDADPAS 215
>gb|ACU14236.1| unknown [Glycine max]
Length = 224
Score = 300 bits (768), Expect = 4e-79
Identities = 144/222 (64%), Positives = 155/222 (69%), Gaps = 6/222 (2%)
Frame = +2
Query: 86 KVRCQRIGCDATFTEDDNPDDSCTYHASGPIFHDGKKEWSCCHQKSHDFSLFLALPGCKT 265
KVRCQRIGCDA F+EDDNPD C YH SGPIFHDG KEWSCC ++SHDFSLFL +PGCKT
Sbjct: 7 KVRCQRIGCDAMFSEDDNPDGCCRYHDSGPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKT 66
Query: 266 GKHTTEKPVITKAVSTTMKPIPSPL----DXXXXXXXXXXXXQGFFCSEHGSQPKEEN-- 427
GKHTT K VIT +TM PSP QGFFCS+HGSQ K N
Sbjct: 67 GKHTTVKQVITPVKKSTM---PSPTAVCSTNASSKDSCPRCQQGFFCSDHGSQSKPANII 123
Query: 428 SKXXXXXXXXXXXXXXXLKHDPAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTACSYHP 607
H P P KKIV +NEPQ C+NKGCG+TFKEKDNHDTACSYHP
Sbjct: 124 GDKAANLAGDASVDNNSSVHAPKP-KKIVDINEPQVCKNKGCGQTFKEKDNHDTACSYHP 182
Query: 608 GPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDSVS 733
GPAVFHDRMRGWKCCDIHVKEFDEF+ IPPCAKGWHN+D S
Sbjct: 183 GPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES 224
>ref|NP_001236558.1| RAR1 protein [Glycine max] gi|208964716|gb|ACI31548.1| RAR1 protein
[Glycine max] gi|288310308|gb|ADC45393.1| RAR1-1
[Glycine max]
Length = 224
Score = 300 bits (767), Expect = 5e-79
Identities = 144/222 (64%), Positives = 154/222 (69%), Gaps = 6/222 (2%)
Frame = +2
Query: 86 KVRCQRIGCDATFTEDDNPDDSCTYHASGPIFHDGKKEWSCCHQKSHDFSLFLALPGCKT 265
KVRCQRIGCDA F+EDDNPD C YH SGPIFHDG KEWSCC ++SHDFSLFL +PGCKT
Sbjct: 7 KVRCQRIGCDAMFSEDDNPDGCCRYHDSGPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKT 66
Query: 266 GKHTTEKPVITKAVSTTMKPIPSPL----DXXXXXXXXXXXXQGFFCSEHGSQPKEEN-- 427
GKHTT K VIT TM PSP QGFFCS+HGSQ K N
Sbjct: 67 GKHTTVKQVITPVKKNTM---PSPTAVCSTNASSKDSCPRCQQGFFCSDHGSQSKPANII 123
Query: 428 SKXXXXXXXXXXXXXXXLKHDPAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTACSYHP 607
H P P KKIV +NEPQ C+NKGCG+TFKEKDNHDTACSYHP
Sbjct: 124 GDKAANLAGDASVDNNSSVHAPKP-KKIVDINEPQVCKNKGCGQTFKEKDNHDTACSYHP 182
Query: 608 GPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDSVS 733
GPAVFHDRMRGWKCCDIHVKEFDEF+ IPPCAKGWHN+D S
Sbjct: 183 GPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES 224