BLASTX nr result

ID: Coptis21_contig00011933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011933
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324983.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06
ref|XP_003633125.1| PREDICTED: arabinogalactan peptide 16-like [...    57   4e-06

>ref|XP_002324983.1| predicted protein [Populus trichocarpa] gi|222866417|gb|EEF03548.1|
           predicted protein [Populus trichocarpa]
          Length = 63

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 30/45 (66%), Positives = 32/45 (71%)
 Frame = +1

Query: 148 SMRLHATPILVLFFLALSHLCHGQGIAPSPAPEGPISDGNTIDQG 282
           SMRLHA PI+   FLAL     GQG APSPA EGP +DG TIDQG
Sbjct: 3   SMRLHALPIIGFMFLALLEFGFGQGTAPSPA-EGPTNDGKTIDQG 46


>ref|XP_003633125.1| PREDICTED: arabinogalactan peptide 16-like [Vitis vinifera]
          Length = 64

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = +1

Query: 151 MRLHATPILVLFFLALSHLCHGQGIAPSPAPEGPISDGNTIDQG 282
           ++ +A PI+ L  LAL     GQGIAPSPAP+GP SDG+TIDQG
Sbjct: 4   IKFYAFPIVGLVLLALLEGSRGQGIAPSPAPQGPFSDGSTIDQG 47


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