BLASTX nr result

ID: Coptis21_contig00011918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011918
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW75942.1| auxin-independent growth promoter-like protein [Z...    44   3e-07
ref|XP_003601898.1| Auxin-independent growth protein [Medicago t...    49   3e-07
ref|NP_001152550.1| auxin-independent growth promoter-like prote...    44   3e-07
gb|ACF86391.1| unknown [Zea mays] gi|219886473|gb|ACL53611.1| un...    44   3e-07
ref|XP_004135279.1| PREDICTED: DUF246 domain-containing protein ...    48   4e-07

>gb|AFW75942.1| auxin-independent growth promoter-like protein [Zea mays]
          Length = 958

 Score = 44.3 bits (103), Expect(2) = 3e-07
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = +2

Query: 263  VEDVIFTRQTRTGFRKEAIPNYDLPDNPLTP 355
            VEDV+ T QTRTG  +   P+YDL +NPLTP
Sbjct: 923  VEDVVITHQTRTGLPEPTFPHYDLWENPLTP 953



 Score = 35.4 bits (80), Expect(2) = 3e-07
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 168 GRNRILSLSKTIKSCTEFFGDPYMGWAKFV 257
           GR+R+ S+       ++FFGDPYM WA FV
Sbjct: 894 GRHRLKSIKPDKGLMSKFFGDPYMPWATFV 923


>ref|XP_003601898.1| Auxin-independent growth protein [Medicago truncatula]
           gi|355490946|gb|AES72149.1| Auxin-independent growth
           protein [Medicago truncatula]
          Length = 662

 Score = 48.5 bits (114), Expect(2) = 3e-07
 Identities = 22/31 (70%), Positives = 24/31 (77%)
 Frame = +2

Query: 263 VEDVIFTRQTRTGFRKEAIPNYDLPDNPLTP 355
           VEDVI T QTRTG  +E  PNYDL +NPLTP
Sbjct: 627 VEDVIVTHQTRTGLPEETFPNYDLWENPLTP 657



 Score = 31.2 bits (69), Expect(2) = 3e-07
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 174 NRILSLSKTIKSCTEFFGDPYMGWAKFV 257
           +R+ S+       ++ FGDPYMGWA FV
Sbjct: 600 HRLKSIKPDKGLMSKSFGDPYMGWAPFV 627


>ref|NP_001152550.1| auxin-independent growth promoter-like protein [Zea mays]
           gi|195657411|gb|ACG48173.1| auxin-independent growth
           promoter-like protein [Zea mays]
          Length = 555

 Score = 44.3 bits (103), Expect(2) = 3e-07
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = +2

Query: 263 VEDVIFTRQTRTGFRKEAIPNYDLPDNPLTP 355
           VEDV+ T QTRTG  +   P+YDL +NPLTP
Sbjct: 520 VEDVVITHQTRTGLPEPTFPHYDLWENPLTP 550



 Score = 35.4 bits (80), Expect(2) = 3e-07
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 168 GRNRILSLSKTIKSCTEFFGDPYMGWAKFV 257
           GR+R+ S+       ++FFGDPYM WA FV
Sbjct: 491 GRHRLKSIKPDKGLMSKFFGDPYMPWATFV 520


>gb|ACF86391.1| unknown [Zea mays] gi|219886473|gb|ACL53611.1| unknown [Zea mays]
          Length = 555

 Score = 44.3 bits (103), Expect(2) = 3e-07
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = +2

Query: 263 VEDVIFTRQTRTGFRKEAIPNYDLPDNPLTP 355
           VEDV+ T QTRTG  +   P+YDL +NPLTP
Sbjct: 520 VEDVVITHQTRTGLPEPTFPHYDLWENPLTP 550



 Score = 35.4 bits (80), Expect(2) = 3e-07
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 168 GRNRILSLSKTIKSCTEFFGDPYMGWAKFV 257
           GR+R+ S+       ++FFGDPYM WA FV
Sbjct: 491 GRHRLKSIKPDKGLMSKFFGDPYMPWATFV 520


>ref|XP_004135279.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus] gi|449520691|ref|XP_004167367.1| PREDICTED:
           DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 552

 Score = 48.1 bits (113), Expect(2) = 4e-07
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = +2

Query: 263 VEDVIFTRQTRTGFRKEAIPNYDLPDNPLTP 355
           VEDV+ T QTRTG  +E  PNYDL +NPLTP
Sbjct: 517 VEDVVVTHQTRTGLPEETFPNYDLWENPLTP 547



 Score = 31.2 bits (69), Expect(2) = 4e-07
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 174 NRILSLSKTIKSCTEFFGDPYMGWAKFV 257
           +R+ S+       ++ FGDPYMGWA FV
Sbjct: 490 HRLKSIKPDKGLMSKSFGDPYMGWAPFV 517


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