BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011906
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloro...   187   9e-46
emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]   186   3e-45
ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like...   182   2e-44
ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
ref|XP_003543816.1| PREDICTED: 50S ribosomal protein L7/L12-like...   159   2e-37

>ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 165

 Score =  187 bits (475), Expect = 9e-46
 Identities = 108/167 (64%), Positives = 124/167 (74%), Gaps = 5/167 (2%)
 Frame = +2

Query: 26  TMITKIANLCRMRPLFFCHRTTLQRSLCTETRT-QKLERLADEILDLNKLERHDYQILFG 202
           ++ T+I     +RPLFF       R+LC+ + T QKLER+ADE+LDL KLER+DY ILF 
Sbjct: 3   SITTRIPYKTLVRPLFFAQ----SRNLCSASATTQKLERIADELLDLTKLERYDYSILFR 58

Query: 203 LKLGLS---PAISGLDXXXXXXXXXXXXXEEAKA-EKTAFDIKLDKFDAAVKIKIINEVR 370
           LKLGL+   PA+SGL               +AKA EKTAFDIKL+KFDAA KIKII EVR
Sbjct: 59  LKLGLNKYGPAVSGLASADSASAGSGSAPADAKAAEKTAFDIKLEKFDAAAKIKIIKEVR 118

Query: 371 TFTDLGLEEAKDLVEKVPVVLKKGVMKEEGNPIIEKLKELGATAVLE 511
           TFTDLGL+EAKDLVEK PVVLKKGV KEEGNPI+EKLKELGAT VLE
Sbjct: 119 TFTDLGLKEAKDLVEKAPVVLKKGVTKEEGNPIVEKLKELGATVVLE 165


>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
          Length = 615

 Score =  186 bits (471), Expect = 3e-45
 Identities = 106/156 (67%), Positives = 119/156 (76%), Gaps = 5/156 (3%)
 Frame = +2

Query: 59  MRPLFFCHRTTLQRSLCTETRT-QKLERLADEILDLNKLERHDYQILFGLKLGLS---PA 226
           +RPLFF       R+LC+ + T QKLER+ADE+LDL KLER+DY ILF LKLGL+   PA
Sbjct: 464 VRPLFFAQ----SRNLCSASATTQKLERIADELLDLTKLERYDYSILFRLKLGLNKYGPA 519

Query: 227 ISGLDXXXXXXXXXXXXXEEAKA-EKTAFDIKLDKFDAAVKIKIINEVRTFTDLGLEEAK 403
           +SGL               +AKA EKTAFDIKL+KFDAA KIKII EVRTFTDLGL+EAK
Sbjct: 520 VSGLASADSASAGSGSAPADAKAAEKTAFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAK 579

Query: 404 DLVEKVPVVLKKGVMKEEGNPIIEKLKELGATAVLE 511
           DLVEK PVVLKKGV KEEGNPI+EKLKELGAT VLE
Sbjct: 580 DLVEKAPVVLKKGVTKEEGNPIVEKLKELGATVVLE 615


>ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus]
           gi|449499867|ref|XP_004160938.1| PREDICTED: 50S
           ribosomal protein L7/L12-like [Cucumis sativus]
          Length = 168

 Score =  182 bits (463), Expect = 2e-44
 Identities = 106/167 (63%), Positives = 122/167 (73%), Gaps = 5/167 (2%)
 Frame = +2

Query: 26  TMITKIANLCRMRPLFFCHRTTLQRSLCT--ETRTQKLERLADEILDLNKLERHDYQILF 199
           ++ +K+     +R L    R  L RSL T  E RTQKLER+ADE+LDL K+ERHDY ILF
Sbjct: 3   SIASKLPAKSLVRLLTVAPRPLLVRSLSTVAEERTQKLERIADELLDLTKIERHDYAILF 62

Query: 200 GLKLGLS---PAISGLDXXXXXXXXXXXXXEEAKAEKTAFDIKLDKFDAAVKIKIINEVR 370
             K+GL+   PA+SGL              E  +AEKT FDIKL+KFDAA KIKII EVR
Sbjct: 63  RYKMGLNKYGPAVSGLSAPGSAAAGSAAA-ETKEAEKTVFDIKLEKFDAAAKIKIIKEVR 121

Query: 371 TFTDLGLEEAKDLVEKVPVVLKKGVMKEEGNPIIEKLKELGATAVLE 511
           TFTDLGL+EAKDLVEKVPVVLKKGV K++GNPIIEKLKELGATAVLE
Sbjct: 122 TFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 168


>ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|222839078|gb|EEE77429.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  167 bits (424), Expect = 8e-40
 Identities = 94/142 (66%), Positives = 105/142 (73%), Gaps = 5/142 (3%)
 Frame = +2

Query: 101 SLCTETRTQKLERLADEILDLNKLERHDYQILFGLKLGLS---PAISG--LDXXXXXXXX 265
           S  +ET+TQKLER+AD +LDL K+ERHDY ILF  K+GL    PA+SG  L         
Sbjct: 32  SSSSETQTQKLERIADVLLDLTKIERHDYAILFRHKMGLGRYGPAVSGAILSGPAAPGSA 91

Query: 266 XXXXXEEAKAEKTAFDIKLDKFDAAVKIKIINEVRTFTDLGLEEAKDLVEKVPVVLKKGV 445
                  A AEKTAFDIKL+KFDAA KIK+I EVRTFTDLGL+EAKDLVEKVPVVLKKG+
Sbjct: 92  SGDVKTAAAAEKTAFDIKLEKFDAAAKIKVIKEVRTFTDLGLKEAKDLVEKVPVVLKKGL 151

Query: 446 MKEEGNPIIEKLKELGATAVLE 511
            KEE  PIIEKLK LGAT VLE
Sbjct: 152 TKEEAGPIIEKLKALGATVVLE 173


>ref|XP_003543816.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 161

 Score =  159 bits (403), Expect = 2e-37
 Identities = 85/143 (59%), Positives = 103/143 (72%), Gaps = 3/143 (2%)
 Frame = +2

Query: 92  LQRSLCTETRTQKLERLADEILDLNKLERHDYQILFGLKLGL---SPAISGLDXXXXXXX 262
           L R+L TE R QK+ER+A E+LDLN  ERHD+ +L+ LK+GL      ++G+        
Sbjct: 19  LTRALSTEARGQKIERIATELLDLNSFERHDFTVLWRLKMGLHRYGAPVAGMTMPSVGAA 78

Query: 263 XXXXXXEEAKAEKTAFDIKLDKFDAAVKIKIINEVRTFTDLGLEEAKDLVEKVPVVLKKG 442
                   A AEK AFD+KL+K+DAA KIKII EVR+FTDLGL+EAKDLVEKVP VLKKG
Sbjct: 79  ARAEAGAAAVAEKMAFDLKLEKYDAAAKIKIIKEVRSFTDLGLKEAKDLVEKVPCVLKKG 138

Query: 443 VMKEEGNPIIEKLKELGATAVLE 511
           + KEE NPI+EKLKELGA  VLE
Sbjct: 139 LTKEEANPIMEKLKELGAAVVLE 161