BLASTX nr result

ID: Coptis21_contig00011905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011905
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17496.3| unnamed protein product [Vitis vinifera]              175   4e-42
ref|XP_002266392.1| PREDICTED: transmembrane protein 53-like [Vi...   175   4e-42
ref|XP_002521563.1| conserved hypothetical protein [Ricinus comm...   142   2e-32
ref|XP_001753718.1| predicted protein [Physcomitrella patens sub...   137   7e-31
ref|XP_003538859.1| PREDICTED: transmembrane protein 53-like [Gl...   137   9e-31

>emb|CBI17496.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score =  175 bits (443), Expect = 4e-42
 Identities = 93/164 (56%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
 Frame = +1

Query: 1   SYGAILDYLQSRGDFMDKIKGCVIDSGGDPEIDPQVWAAGFSAAVLKKRSSATLPSEEAI 180
           +YGAILD+LQ R D M+KIKGCV+DSGGDPEI+PQVWAAGFSAA+LKK SS+     E  
Sbjct: 233 AYGAILDHLQGRPDLMEKIKGCVVDSGGDPEINPQVWAAGFSAALLKKNSSSAYSLVEVT 292

Query: 181 -RHELQTDDGISKXXXXXXXXXXXXXXXXXXXXXXXXXXXPDVNRRLTKIISTLSKSQPS 357
            R+E ++    SK                           PDVNRRLTKIIS LSK+QP 
Sbjct: 293 ERNESKSKVDSSKVQEKEPLIIETMLLSVLEFFFSVILRLPDVNRRLTKIISILSKNQPP 352

Query: 358 CPQLYLYSTADKVIPYGPVEMFMQEQKMIGRKVLAYNFGSSPHI 489
           C QLYLYSTADKVIPY  VEMF+ EQ  +G+KV ++NFG SPH+
Sbjct: 353 CSQLYLYSTADKVIPYHSVEMFINEQMRMGKKVRSFNFGLSPHV 396


>ref|XP_002266392.1| PREDICTED: transmembrane protein 53-like [Vitis vinifera]
          Length = 489

 Score =  175 bits (443), Expect = 4e-42
 Identities = 93/164 (56%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
 Frame = +1

Query: 1   SYGAILDYLQSRGDFMDKIKGCVIDSGGDPEIDPQVWAAGFSAAVLKKRSSATLPSEEAI 180
           +YGAILD+LQ R D M+KIKGCV+DSGGDPEI+PQVWAAGFSAA+LKK SS+     E  
Sbjct: 221 AYGAILDHLQGRPDLMEKIKGCVVDSGGDPEINPQVWAAGFSAALLKKNSSSAYSLVEVT 280

Query: 181 -RHELQTDDGISKXXXXXXXXXXXXXXXXXXXXXXXXXXXPDVNRRLTKIISTLSKSQPS 357
            R+E ++    SK                           PDVNRRLTKIIS LSK+QP 
Sbjct: 281 ERNESKSKVDSSKVQEKEPLIIETMLLSVLEFFFSVILRLPDVNRRLTKIISILSKNQPP 340

Query: 358 CPQLYLYSTADKVIPYGPVEMFMQEQKMIGRKVLAYNFGSSPHI 489
           C QLYLYSTADKVIPY  VEMF+ EQ  +G+KV ++NFG SPH+
Sbjct: 341 CSQLYLYSTADKVIPYHSVEMFINEQMRMGKKVRSFNFGLSPHV 384


>ref|XP_002521563.1| conserved hypothetical protein [Ricinus communis]
           gi|223539241|gb|EEF40834.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 265

 Score =  142 bits (359), Expect = 2e-32
 Identities = 77/164 (46%), Positives = 102/164 (62%), Gaps = 2/164 (1%)
 Frame = +1

Query: 4   YGAILDYLQ--SRGDFMDKIKGCVIDSGGDPEIDPQVWAAGFSAAVLKKRSSATLPSEEA 177
           YG ILD LQ  ++    +KIKGCV+DSGG    +P+VWAAGFSAA+LKK SSA  P  E 
Sbjct: 81  YGYILDILQLQNKEHLKEKIKGCVVDSGGGEPFNPKVWAAGFSAALLKKSSSAIHPLAEI 140

Query: 178 IRHELQTDDGISKXXXXXXXXXXXXXXXXXXXXXXXXXXXPDVNRRLTKIISTLSKSQPS 357
               ++ +   +K                           PDV R+L KI+  LS++QP 
Sbjct: 141 KHQAIKLNMQENKSPLVEVLVLAVLEKLFSKMLKL-----PDVERKLKKIVFVLSENQPH 195

Query: 358 CPQLYLYSTADKVIPYGPVEMFMQEQKMIGRKVLAYNFGSSPHI 489
           CPQLYLYSTADKV+P+  +E+ M++Q+ IGRKV++YNFGSSPH+
Sbjct: 196 CPQLYLYSTADKVVPFQSIELQMEDQRKIGRKVVSYNFGSSPHV 239


>ref|XP_001753718.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162695125|gb|EDQ81470.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 278

 Score =  137 bits (346), Expect = 7e-31
 Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
 Frame = +1

Query: 1   SYGAILDYLQSRGDFMDKIKGCVIDSGGDPEIDPQVWAAGFSAAVLKKRSSATLPS---- 168
           +YG IL+ +Q +G F++KI GCV+DS    + DPQVWA+GFSAA+LKKRSSAT P     
Sbjct: 90  TYGIILEKMQEQGHFLEKIAGCVVDSAPVADPDPQVWASGFSAALLKKRSSATQPGFSNR 149

Query: 169 --EEAIRHELQTDDGISKXXXXXXXXXXXXXXXXXXXXXXXXXXXPDVNRRLTKIISTLS 342
             EE I  E  +   I                             P +++RL+++++ L 
Sbjct: 150 EVEEGITVEASSQGTIVNSEAKRANGLEIAVLPLLEAFFSLFLKLPAIDQRLSQVVNVLQ 209

Query: 343 KSQPSCPQLYLYSTADKVIPYGPVEMFMQEQKMIGRKVLAYNFGSSPHI 489
           K QP+CPQLY+YSTADKVIP   VE F++EQ+  GR V A N  SSPH+
Sbjct: 210 KKQPACPQLYIYSTADKVIPVKAVEAFIEEQRKSGRVVRACNLQSSPHV 258


>ref|XP_003538859.1| PREDICTED: transmembrane protein 53-like [Glycine max]
          Length = 387

 Score =  137 bits (345), Expect = 9e-31
 Identities = 71/162 (43%), Positives = 98/162 (60%)
 Frame = +1

Query: 4   YGAILDYLQSRGDFMDKIKGCVIDSGGDPEIDPQVWAAGFSAAVLKKRSSATLPSEEAIR 183
           YG IL  +    + M+KIKGC++DSGG    +PQVWAAGFSAA+LKKR S     E   +
Sbjct: 195 YGYILARMLGSEELMEKIKGCIVDSGGGEPFNPQVWAAGFSAAILKKRISLGPIVEVEGK 254

Query: 184 HELQTDDGISKXXXXXXXXXXXXXXXXXXXXXXXXXXXPDVNRRLTKIISTLSKSQPSCP 363
            + +T+  + K                           PDVN+RLT+I++ L K QP CP
Sbjct: 255 LKSETEVSLPKIEQKESSTIETLVLSLLEKFFSFVLQLPDVNQRLTRIVNVLMKHQP-CP 313

Query: 364 QLYLYSTADKVIPYGPVEMFMQEQKMIGRKVLAYNFGSSPHI 489
           QLYLYSTADKV+PY  +E  ++EQ+ +G++V ++NFG SPH+
Sbjct: 314 QLYLYSTADKVVPYQSIETLIEEQRKMGKRVRSFNFGLSPHV 355


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