BLASTX nr result

ID: Coptis21_contig00011876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011876
         (1533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272974.1| PREDICTED: uncharacterized protein LOC100256...   298   3e-78
emb|CBI29210.3| unnamed protein product [Vitis vinifera]              267   5e-69
ref|NP_001239840.1| uncharacterized protein LOC100819752 [Glycin...   251   5e-64
ref|XP_003612507.1| hypothetical protein MTR_5g025800 [Medicago ...   241   3e-61
ref|XP_002328837.1| predicted protein [Populus trichocarpa] gi|2...   234   3e-59

>ref|XP_002272974.1| PREDICTED: uncharacterized protein LOC100256375 [Vitis vinifera]
          Length = 364

 Score =  298 bits (763), Expect = 3e-78
 Identities = 164/365 (44%), Positives = 234/365 (64%), Gaps = 12/365 (3%)
 Frame = -2

Query: 1346 MGLFLEIMTNTLFLVIQPFSLLRVASMYGVRTICLVTHIWLHLVGAIINFNLDICWKVMV 1167
            MGL  E+M   + LV +PFSL ++  +  V+T+ ++ + W+ LV A I F+++I W++++
Sbjct: 1    MGLLPELMATIIILVTKPFSLFKLLCIICVKTLFIIAYTWMELVRAAIYFHVNIFWRIVI 60

Query: 1166 WILAFVTLPMRILTALQRERLLIMHLHEMQVELEDLAWDKKQLGEQLERAAKDCKXXXXX 987
            W +A ++LP+RILTALQRERLL MHL EMQ++LE+L WD+K+L   L+ A K+ +     
Sbjct: 61   WTVALISLPVRILTALQRERLLEMHLQEMQIDLENLMWDRKELEGHLKVATKEHRVMEMM 120

Query: 986  XXXXXXEHDEAMAKIDHLENELQHLKDENTKVTEIQGKAKRNFVAQDEYICENVIDDNKN 807
                  EHD+A+ KI+ LE+++Q LK+EN ++ EIQG+   +   QD+    N  +    
Sbjct: 121  LLELEEEHDKAIVKIELLESKVQDLKNENNRLKEIQGRRLLSLKGQDD--TGNDQNSGIT 178

Query: 806  DLFVTEYDTSSLRSGD-----VFQDLLMHRKEGESNPQPHVLL----KTGS---GVLRPI 663
            D +   Y   S +SG      + QD +MHR + E+  +    L    K+G+   G + P 
Sbjct: 179  DNYGIPYGIPSWKSGYHERGLILQDFMMHRDDWENESKSKTELPFPSKSGAEAAGHIYPF 238

Query: 662  SPGIIPRSLPRDEALDERWGVAXXXXXXXXXXXXLVGIIIWQAQDACMPLVVALFIVVGM 483
            +PGI  R+   +E LD+R   A            LVG+IIW+A+D CMPLVVAL+ VVGM
Sbjct: 239  TPGITFRNSNMNEVLDQRRDTALLQSLFSAILSLLVGMIIWEAEDPCMPLVVALYTVVGM 298

Query: 482  SLRSVVQFFYTIENRPASDTVALLSVNWFVLGTLTYPTLPKVARVFVPLVLSLADKMVYW 303
            SL+SVVQFF TI+N+PASD VALLS NWF+LGTLTYPTLP+VAR+  PL LS  D+ + W
Sbjct: 299  SLKSVVQFFSTIKNKPASDAVALLSFNWFLLGTLTYPTLPRVARMLAPLALSFVDQTLSW 358

Query: 302  FGLSS 288
             GLSS
Sbjct: 359  LGLSS 363


>emb|CBI29210.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  267 bits (683), Expect = 5e-69
 Identities = 150/325 (46%), Positives = 209/325 (64%), Gaps = 12/325 (3%)
 Frame = -2

Query: 1226 LHLVGAIINFNLDICWKVMVWILAFVTLPMRILTALQRERLLIMHLHEMQVELEDLAWDK 1047
            + LV A I F+++I W++++W +A ++LP+RILTALQRERLL MHL EMQ++LE+L WD+
Sbjct: 1    MELVRAAIYFHVNIFWRIVIWTVALISLPVRILTALQRERLLEMHLQEMQIDLENLMWDR 60

Query: 1046 KQLGEQLERAAKDCKXXXXXXXXXXXEHDEAMAKIDHLENELQHLKDENTKVTEIQGKAK 867
            K+L   L+ A K+ +           EHD+A+ KI+ LE+++Q LK+EN ++ EIQG+  
Sbjct: 61   KELEGHLKVATKEHRVMEMMLLELEEEHDKAIVKIELLESKVQDLKNENNRLKEIQGRRL 120

Query: 866  RNFVAQDEYICENVIDDNKNDLFVTEYDTSSLRSGD-----VFQDLLMHRKEGESNPQPH 702
             +   QD+    N  +    D +   Y   S +SG      + QD +MHR + E+  +  
Sbjct: 121  LSLKGQDD--TGNDQNSGITDNYGIPYGIPSWKSGYHERGLILQDFMMHRDDWENESKSK 178

Query: 701  VLL----KTGS---GVLRPISPGIIPRSLPRDEALDERWGVAXXXXXXXXXXXXLVGIII 543
              L    K+G+   G + P +PGI  R+   +E LD+R   A            LVG+II
Sbjct: 179  TELPFPSKSGAEAAGHIYPFTPGITFRNSNMNEVLDQRRDTALLQSLFSAILSLLVGMII 238

Query: 542  WQAQDACMPLVVALFIVVGMSLRSVVQFFYTIENRPASDTVALLSVNWFVLGTLTYPTLP 363
            W+A+D CMPLVVAL+ VVGMSL+SVVQFF TI+N+PASD VALLS NWF+LGTLTYPTLP
Sbjct: 239  WEAEDPCMPLVVALYTVVGMSLKSVVQFFSTIKNKPASDAVALLSFNWFLLGTLTYPTLP 298

Query: 362  KVARVFVPLVLSLADKMVYWFGLSS 288
            +VAR+  PL LS  D+ + W GLSS
Sbjct: 299  RVARMLAPLALSFVDQTLSWLGLSS 323


>ref|NP_001239840.1| uncharacterized protein LOC100819752 [Glycine max]
            gi|255638686|gb|ACU19648.1| unknown [Glycine max]
          Length = 351

 Score =  251 bits (640), Expect = 5e-64
 Identities = 150/353 (42%), Positives = 213/353 (60%), Gaps = 9/353 (2%)
 Frame = -2

Query: 1346 MGLFLEIMTNTLFLVIQPFSLLRVASMYGVRTICLVTHIWLHLVGAIINFNLDICWKVMV 1167
            M L  E++ NT+ LV++ FSLLR+A ++G+R    V + W  L+G  I+F+ +I  +++ 
Sbjct: 1    MALISELLANTILLVMRHFSLLRLACLFGIRIALTVIYTWTELIGTTISFHANIILRIIT 60

Query: 1166 WILAFVTLPMRILTALQRERLLIMHLHEMQVELEDLAWDKKQLGEQLERAAKDCKXXXXX 987
            W    ++LP R++ A QRER L   LHEMQ+ELE+L WDKK+L E  + A K+ K     
Sbjct: 61   WTFGLISLPARVVYAFQRERQLEQKLHEMQIELENLVWDKKELQEHFKMAVKERKMMEML 120

Query: 986  XXXXXXEHDEAMAKIDHLENELQHLKDENTKVTEIQGKAKRNFVAQDEYICENV--IDDN 813
                  EHD A+ KI+ LE + Q   +EN ++ EIQGK  R + ++D+   + V  I+D+
Sbjct: 121  LVELEEEHDMAIEKIEKLEGKDQ--TNENLRLKEIQGK--RYWSSKDQSNSDRVQTINDS 176

Query: 812  KNDLF--VTEYDTSSLRSGDVFQDLLMHRKEGESNPQPHVLLKTGSGVLRPISPGIIPRS 639
              ++   +   +++   SG   QDL+M +   E         KT S +L+ +    +P+S
Sbjct: 177  NYNISHPILSLNSNYNGSGISLQDLIMCKDIWEDES------KTRSELLKLLKA--VPKS 228

Query: 638  LP-----RDEALDERWGVAXXXXXXXXXXXXLVGIIIWQAQDACMPLVVALFIVVGMSLR 474
             P       EALD    VA            +VG+ +W+A+D C PLVVALF VVGMSL+
Sbjct: 229  GPVVKSKTSEALDYHRDVALSQSLFSAIMSLVVGVTVWEAEDPCTPLVVALFAVVGMSLK 288

Query: 473  SVVQFFYTIENRPASDTVALLSVNWFVLGTLTYPTLPKVARVFVPLVLSLADK 315
            SVVQFF TI N+PASD VALLS NWF+LGTLTYPTLP+VAR+  PLVL L D+
Sbjct: 289  SVVQFFSTIRNKPASDAVALLSFNWFILGTLTYPTLPRVARMLAPLVLRLMDQ 341


>ref|XP_003612507.1| hypothetical protein MTR_5g025800 [Medicago truncatula]
            gi|355513842|gb|AES95465.1| hypothetical protein
            MTR_5g025800 [Medicago truncatula]
          Length = 363

 Score =  241 bits (616), Expect = 3e-61
 Identities = 145/368 (39%), Positives = 210/368 (57%), Gaps = 15/368 (4%)
 Frame = -2

Query: 1346 MGLFLEIMTNTLFLVIQPFSLLRVASMYGVRTICLVTHIWLHLVGAIINFNLDICWKVMV 1167
            M L  E++ + + LV + FS+L+ A ++ +R   +V + W  L+   I FN++I   ++ 
Sbjct: 1    MALISELLASVMILVTRGFSMLKEACLFPIRIGLVVIYTWTELIRTAIIFNVNIVLGIIS 60

Query: 1166 WILAFVTLPMRILTALQRERLLIMHLHEMQVELEDLAWDKKQLGEQLERAAKDCKXXXXX 987
            W +  + LP+R + A+QRER L   LH MQ E+E+L W + +L E+ + A K+CK     
Sbjct: 61   WTIGLIFLPVRAVNAIQRERQLEQQLHRMQTEMENLEWKQNKLQERFQMALKECKMMEML 120

Query: 986  XXXXXXEHDEAMAKIDHLENELQHLKDENTKVTEIQGKAKRNFVAQDEYICENVIDDNKN 807
                  EHD A+AKI++LE +L+   +EN ++ EIQGK   N   Q      N+ +D K 
Sbjct: 121  LAELEEEHDMAVAKIENLEGKLRGQINENLRLKEIQGKGYWNSKDQ------NIDNDRKI 174

Query: 806  DLFVTEYDTSSL--RSGDV-----FQDLLMHRKEGESNPQPHV----LLKTGSGVLRPIS 660
            +         +L  +SG+       +DLLMH+   E   +  +    LLKTG     P +
Sbjct: 175  EKTNNGIPPPNLPWKSGNSENEVSLKDLLMHKDMWEDEDKTRIELLKLLKTGQKSA-PAN 233

Query: 659  PGIIPRSLPRD----EALDERWGVAXXXXXXXXXXXXLVGIIIWQAQDACMPLVVALFIV 492
                P  + +D    E LD    VA            +VG+ +W+A D CMPL+VALF V
Sbjct: 234  SAAKPEPISKDIEVSEVLDHHRYVAISQSIFSAVLSLIVGVTVWEADDPCMPLIVALFAV 293

Query: 491  VGMSLRSVVQFFYTIENRPASDTVALLSVNWFVLGTLTYPTLPKVARVFVPLVLSLADKM 312
            VGMSL+SVVQFF++I+N+PASD VALLS NWF+LGTLTYPTLP+VA +  PLVL   D+ 
Sbjct: 294  VGMSLKSVVQFFFSIKNKPASDAVALLSFNWFILGTLTYPTLPRVAPMLAPLVLRFLDQT 353

Query: 311  VYWFGLSS 288
            +  FGL S
Sbjct: 354  MTRFGLLS 361


>ref|XP_002328837.1| predicted protein [Populus trichocarpa] gi|222839135|gb|EEE77486.1|
            predicted protein [Populus trichocarpa]
          Length = 305

 Score =  234 bits (598), Expect = 3e-59
 Identities = 137/329 (41%), Positives = 192/329 (58%)
 Frame = -2

Query: 1325 MTNTLFLVIQPFSLLRVASMYGVRTICLVTHIWLHLVGAIINFNLDICWKVMVWILAFVT 1146
            M   L LV +PFSL ++A M+ ++ + +  H W+ L+   INF+L++ WK MV  +  + 
Sbjct: 1    MDTALILVTKPFSLCKLAIMFPLKIMFIAIHTWIELLVVTINFHLNMFWKAMVCFVGLIL 60

Query: 1145 LPMRILTALQRERLLIMHLHEMQVELEDLAWDKKQLGEQLERAAKDCKXXXXXXXXXXXE 966
             P R+LTAL RE++L  HL  MQ+EL++L W++K+L  QL+ A K+ +           E
Sbjct: 61   FPGRVLTALPREKMLEDHLLRMQIELDNLIWERKELHGQLQTADKEIRILESMLAEVEEE 120

Query: 965  HDEAMAKIDHLENELQHLKDENTKVTEIQGKAKRNFVAQDEYICENVIDDNKNDLFVTEY 786
            +D+A+AKI+ LE ELQ LK EN ++ E  GK   +F   D         DN +++    Y
Sbjct: 121  NDKAIAKIEFLEVELQDLKAENAQLKENLGKGCWSFKDHDHR-------DNGHNIIADNY 173

Query: 785  DTSSLRSGDVFQDLLMHRKEGESNPQPHVLLKTGSGVLRPISPGIIPRSLPRDEALDERW 606
              SS    +  +         ES         T S  +  ++ G+  R+L  +EAL    
Sbjct: 174  GISSAEFANCLK--------AES---------TDSVPIHQVTTGVFSRNLDINEALILSR 216

Query: 605  GVAXXXXXXXXXXXXLVGIIIWQAQDACMPLVVALFIVVGMSLRSVVQFFYTIENRPASD 426
              A            LVG+IIW+A+D CMPLVVALF VVGMSL+SVVQFF TI+N+PASD
Sbjct: 217  EAALSQSLFSAVLSLLVGMIIWEAEDPCMPLVVALFTVVGMSLKSVVQFFSTIKNKPASD 276

Query: 425  TVALLSVNWFVLGTLTYPTLPKVARVFVP 339
             VALLS+NWF+LGTLTYPTLP+VA +  P
Sbjct: 277  AVALLSINWFILGTLTYPTLPRVAHILAP 305


Top