BLASTX nr result

ID: Coptis21_contig00011872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011872
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272641.1| PREDICTED: farnesyl pyrophosphate synthase 1...   210   3e-52
gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica]      210   3e-52
gb|AAX76910.1| farnesyl diphosphate synthase [Vitis vinifera]         209   4e-52
gb|ABK95166.1| unknown [Populus trichocarpa]                          209   4e-52
gb|AFW98445.1| farnesyl diphosphate synthase [Leibnitzia anandria]    207   1e-51

>ref|XP_002272641.1| PREDICTED: farnesyl pyrophosphate synthase 1 [Vitis vinifera]
           gi|296089967|emb|CBI39786.3| unnamed protein product
           [Vitis vinifera]
          Length = 341

 Score =  210 bits (534), Expect = 3e-52
 Identities = 103/138 (74%), Positives = 119/138 (86%)
 Frame = +1

Query: 1   LLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDPKVIGKIGTDIADNKCSWLVVQS 180
           LLMAGEN+ NHT+VK +L++MG YFQVQDDYLDCFGDP+VIGKIGTDI D KCSWLVV++
Sbjct: 203 LLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGDPQVIGKIGTDIEDFKCSWLVVKA 262

Query: 181 LQLANEDQKKVLVENYGKADQACVEKVKALYIELDLQEVFALYERNSYEKLLSSIESNPN 360
           L++ NE+QKK L  NYGKAD A V KVKALY +LDLQ VF  YE  SYE L+SSIE++P+
Sbjct: 263 LEICNEEQKKTLYGNYGKADPANVAKVKALYKDLDLQGVFLEYESKSYETLVSSIEAHPS 322

Query: 361 KAVQAVLKSFLGKIYKRQ 414
           KAVQAVLKSFLGKIYKRQ
Sbjct: 323 KAVQAVLKSFLGKIYKRQ 340


>gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica]
          Length = 342

 Score =  210 bits (534), Expect = 3e-52
 Identities = 102/138 (73%), Positives = 119/138 (86%)
 Frame = +1

Query: 1   LLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDPKVIGKIGTDIADNKCSWLVVQS 180
           LLMAGE++  HTNVK +LIEMGTYFQVQDDYLDCFG P+VIGKIGTDI D KCSWLVV++
Sbjct: 204 LLMAGEDLEKHTNVKDILIEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKA 263

Query: 181 LQLANEDQKKVLVENYGKADQACVEKVKALYIELDLQEVFALYERNSYEKLLSSIESNPN 360
           L+L+NE+QKK L ENYGK D ACV K+K LY +L LQ+VFA YE  SYEKL+  IE++PN
Sbjct: 264 LELSNEEQKKCLHENYGKEDPACVAKIKELYKDLKLQDVFAEYESKSYEKLIKFIEAHPN 323

Query: 361 KAVQAVLKSFLGKIYKRQ 414
           ++VQAVLKSFLGKIYKRQ
Sbjct: 324 QSVQAVLKSFLGKIYKRQ 341


>gb|AAX76910.1| farnesyl diphosphate synthase [Vitis vinifera]
          Length = 341

 Score =  209 bits (533), Expect = 4e-52
 Identities = 102/138 (73%), Positives = 119/138 (86%)
 Frame = +1

Query: 1   LLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDPKVIGKIGTDIADNKCSWLVVQS 180
           LLMAGEN+ NHT+VK +L++MG YFQVQDDYLDCFGDP+VIGKIGTDI D KCSWL+V++
Sbjct: 203 LLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGDPQVIGKIGTDIEDFKCSWLIVKA 262

Query: 181 LQLANEDQKKVLVENYGKADQACVEKVKALYIELDLQEVFALYERNSYEKLLSSIESNPN 360
           L++ NE+QKK L  NYGKAD A V KVKALY +LDLQ VF  YE  SYE L+SSIE++P+
Sbjct: 263 LEICNEEQKKTLYGNYGKADPANVAKVKALYKDLDLQGVFLEYESKSYETLVSSIEAHPS 322

Query: 361 KAVQAVLKSFLGKIYKRQ 414
           KAVQAVLKSFLGKIYKRQ
Sbjct: 323 KAVQAVLKSFLGKIYKRQ 340


>gb|ABK95166.1| unknown [Populus trichocarpa]
          Length = 342

 Score =  209 bits (533), Expect = 4e-52
 Identities = 103/138 (74%), Positives = 121/138 (87%)
 Frame = +1

Query: 1   LLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDPKVIGKIGTDIADNKCSWLVVQS 180
           LLMAGEN+ NH +VK++L+EMGTYFQVQDDYLDCFG P+ IGKIGTDI D KCSWLVV++
Sbjct: 204 LLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFGAPETIGKIGTDIEDFKCSWLVVKA 263

Query: 181 LQLANEDQKKVLVENYGKADQACVEKVKALYIELDLQEVFALYERNSYEKLLSSIESNPN 360
           L++ NE+QKK+L ENYGKAD A V KVKALY EL+LQ VFA YE  SYEKL++SIE++P+
Sbjct: 264 LEICNEEQKKLLHENYGKADPANVAKVKALYHELNLQGVFADYESKSYEKLIASIEAHPS 323

Query: 361 KAVQAVLKSFLGKIYKRQ 414
           KAVQAVLKSFL KIYKRQ
Sbjct: 324 KAVQAVLKSFLAKIYKRQ 341


>gb|AFW98445.1| farnesyl diphosphate synthase [Leibnitzia anandria]
          Length = 342

 Score =  207 bits (528), Expect = 1e-51
 Identities = 101/138 (73%), Positives = 119/138 (86%)
 Frame = +1

Query: 1   LLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDPKVIGKIGTDIADNKCSWLVVQS 180
           LLM GEN+ +H  VK +L+EMGTYFQVQDDYLDCFG P+VIGKIGTDI D KCSWLVV++
Sbjct: 204 LLMYGENLDDHVQVKEVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKA 263

Query: 181 LQLANEDQKKVLVENYGKADQACVEKVKALYIELDLQEVFALYERNSYEKLLSSIESNPN 360
           L+LANE+QKK+L ENYGK D +CV KVK LY  L+LQ VF  YE+ SYEKL++SIE++P+
Sbjct: 264 LELANEEQKKLLTENYGKKDPSCVAKVKELYNTLNLQFVFEDYEKKSYEKLITSIEAHPS 323

Query: 361 KAVQAVLKSFLGKIYKRQ 414
           KAVQAVLKSFLGKIYKRQ
Sbjct: 324 KAVQAVLKSFLGKIYKRQ 341


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