BLASTX nr result
ID: Coptis21_contig00011872
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011872 (725 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272641.1| PREDICTED: farnesyl pyrophosphate synthase 1... 210 3e-52 gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica] 210 3e-52 gb|AAX76910.1| farnesyl diphosphate synthase [Vitis vinifera] 209 4e-52 gb|ABK95166.1| unknown [Populus trichocarpa] 209 4e-52 gb|AFW98445.1| farnesyl diphosphate synthase [Leibnitzia anandria] 207 1e-51 >ref|XP_002272641.1| PREDICTED: farnesyl pyrophosphate synthase 1 [Vitis vinifera] gi|296089967|emb|CBI39786.3| unnamed protein product [Vitis vinifera] Length = 341 Score = 210 bits (534), Expect = 3e-52 Identities = 103/138 (74%), Positives = 119/138 (86%) Frame = +1 Query: 1 LLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDPKVIGKIGTDIADNKCSWLVVQS 180 LLMAGEN+ NHT+VK +L++MG YFQVQDDYLDCFGDP+VIGKIGTDI D KCSWLVV++ Sbjct: 203 LLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGDPQVIGKIGTDIEDFKCSWLVVKA 262 Query: 181 LQLANEDQKKVLVENYGKADQACVEKVKALYIELDLQEVFALYERNSYEKLLSSIESNPN 360 L++ NE+QKK L NYGKAD A V KVKALY +LDLQ VF YE SYE L+SSIE++P+ Sbjct: 263 LEICNEEQKKTLYGNYGKADPANVAKVKALYKDLDLQGVFLEYESKSYETLVSSIEAHPS 322 Query: 361 KAVQAVLKSFLGKIYKRQ 414 KAVQAVLKSFLGKIYKRQ Sbjct: 323 KAVQAVLKSFLGKIYKRQ 340 >gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica] Length = 342 Score = 210 bits (534), Expect = 3e-52 Identities = 102/138 (73%), Positives = 119/138 (86%) Frame = +1 Query: 1 LLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDPKVIGKIGTDIADNKCSWLVVQS 180 LLMAGE++ HTNVK +LIEMGTYFQVQDDYLDCFG P+VIGKIGTDI D KCSWLVV++ Sbjct: 204 LLMAGEDLEKHTNVKDILIEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKA 263 Query: 181 LQLANEDQKKVLVENYGKADQACVEKVKALYIELDLQEVFALYERNSYEKLLSSIESNPN 360 L+L+NE+QKK L ENYGK D ACV K+K LY +L LQ+VFA YE SYEKL+ IE++PN Sbjct: 264 LELSNEEQKKCLHENYGKEDPACVAKIKELYKDLKLQDVFAEYESKSYEKLIKFIEAHPN 323 Query: 361 KAVQAVLKSFLGKIYKRQ 414 ++VQAVLKSFLGKIYKRQ Sbjct: 324 QSVQAVLKSFLGKIYKRQ 341 >gb|AAX76910.1| farnesyl diphosphate synthase [Vitis vinifera] Length = 341 Score = 209 bits (533), Expect = 4e-52 Identities = 102/138 (73%), Positives = 119/138 (86%) Frame = +1 Query: 1 LLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDPKVIGKIGTDIADNKCSWLVVQS 180 LLMAGEN+ NHT+VK +L++MG YFQVQDDYLDCFGDP+VIGKIGTDI D KCSWL+V++ Sbjct: 203 LLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGDPQVIGKIGTDIEDFKCSWLIVKA 262 Query: 181 LQLANEDQKKVLVENYGKADQACVEKVKALYIELDLQEVFALYERNSYEKLLSSIESNPN 360 L++ NE+QKK L NYGKAD A V KVKALY +LDLQ VF YE SYE L+SSIE++P+ Sbjct: 263 LEICNEEQKKTLYGNYGKADPANVAKVKALYKDLDLQGVFLEYESKSYETLVSSIEAHPS 322 Query: 361 KAVQAVLKSFLGKIYKRQ 414 KAVQAVLKSFLGKIYKRQ Sbjct: 323 KAVQAVLKSFLGKIYKRQ 340 >gb|ABK95166.1| unknown [Populus trichocarpa] Length = 342 Score = 209 bits (533), Expect = 4e-52 Identities = 103/138 (74%), Positives = 121/138 (87%) Frame = +1 Query: 1 LLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDPKVIGKIGTDIADNKCSWLVVQS 180 LLMAGEN+ NH +VK++L+EMGTYFQVQDDYLDCFG P+ IGKIGTDI D KCSWLVV++ Sbjct: 204 LLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFGAPETIGKIGTDIEDFKCSWLVVKA 263 Query: 181 LQLANEDQKKVLVENYGKADQACVEKVKALYIELDLQEVFALYERNSYEKLLSSIESNPN 360 L++ NE+QKK+L ENYGKAD A V KVKALY EL+LQ VFA YE SYEKL++SIE++P+ Sbjct: 264 LEICNEEQKKLLHENYGKADPANVAKVKALYHELNLQGVFADYESKSYEKLIASIEAHPS 323 Query: 361 KAVQAVLKSFLGKIYKRQ 414 KAVQAVLKSFL KIYKRQ Sbjct: 324 KAVQAVLKSFLAKIYKRQ 341 >gb|AFW98445.1| farnesyl diphosphate synthase [Leibnitzia anandria] Length = 342 Score = 207 bits (528), Expect = 1e-51 Identities = 101/138 (73%), Positives = 119/138 (86%) Frame = +1 Query: 1 LLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDPKVIGKIGTDIADNKCSWLVVQS 180 LLM GEN+ +H VK +L+EMGTYFQVQDDYLDCFG P+VIGKIGTDI D KCSWLVV++ Sbjct: 204 LLMYGENLDDHVQVKEVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKA 263 Query: 181 LQLANEDQKKVLVENYGKADQACVEKVKALYIELDLQEVFALYERNSYEKLLSSIESNPN 360 L+LANE+QKK+L ENYGK D +CV KVK LY L+LQ VF YE+ SYEKL++SIE++P+ Sbjct: 264 LELANEEQKKLLTENYGKKDPSCVAKVKELYNTLNLQFVFEDYEKKSYEKLITSIEAHPS 323 Query: 361 KAVQAVLKSFLGKIYKRQ 414 KAVQAVLKSFLGKIYKRQ Sbjct: 324 KAVQAVLKSFLGKIYKRQ 341