BLASTX nr result

ID: Coptis21_contig00011871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011871
         (1423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270552.1| PREDICTED: uncharacterized protein LOC100261...   137   5e-30
ref|XP_002301615.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-29
emb|CAN61787.1| hypothetical protein VITISV_006025 [Vitis vinifera]   108   4e-21
ref|XP_002529332.1| hypothetical protein RCOM_1016710 [Ricinus c...   106   2e-20
ref|XP_003628559.1| GD3A [Medicago truncatula] gi|355522581|gb|A...    79   4e-12

>ref|XP_002270552.1| PREDICTED: uncharacterized protein LOC100261856 [Vitis vinifera]
            gi|297739184|emb|CBI28835.3| unnamed protein product
            [Vitis vinifera]
          Length = 514

 Score =  137 bits (346), Expect = 5e-30
 Identities = 108/336 (32%), Positives = 149/336 (44%), Gaps = 13/336 (3%)
 Frame = +2

Query: 2    EQLMTNKVVKFAEALAPPGQNNLSLFENTQSSEALSRPTAGAVDDPFSGWEDEFQSAGVR 181
            EQ    K ++  E+ A  G  NLSLFEN   SE + RP        FSGWE EFQ+A   
Sbjct: 192  EQFAATKEIRSKESNALQGHENLSLFENVHPSETVVRPAEDKNSAAFSGWEAEFQNANSE 251

Query: 182  TLPVESKSLDFFSEASPIEFSSSLEAAVGLEAETKFGFDSIRNNVEENTTSVPHASMNDS 361
            ++   SK  D F   S ++ SS ++A  G       G D    +V ++TT    AS  + 
Sbjct: 252  SVHEGSKEFDPF-VGSTVDLSSHMDAVFG------SGKDINSAHVSDDTTP---ASRTND 301

Query: 362  WVQDDQWHASNIVLSTKTAQVEIKSEGTKVGEPTDKINSISSLDNNLFRDDLWQTGPEKH 541
            W+QDD +   N  +     QV    + T   E    +   SS  N+ F+DD W+    K 
Sbjct: 302  WIQDDLYKNLNSKVPAHVGQV----DSTIQAEDAQNLAGPSSTRNDWFQDDQWKNSSAKS 357

Query: 542  RE-------DDESFDAWQDF---TXXXXXXXXXXXXXXXXXXXXXXXXXXXKKLVSSSHD 691
             +       +D  FDAW DF   +                             L+SS+ +
Sbjct: 358  TDNKIALGKNDNLFDAWNDFPSSSTSQDPFRSSWKHNNGSSLTPSVEQTSEPNLLSSTSN 417

Query: 692  FQEMEFGSFMSPGLFSGG--TSINDGSTAMNNVKEGSISDRLVEVNVGGVKSIENANSSF 865
             QEMEFG+F      S G   + ND ST  N + E S S+R  + +      +E +    
Sbjct: 418  LQEMEFGNFSQQEDLSSGADNNQNDSSTVSNMLPEASDSNRKADTSAEDGGRLEQSVKDE 477

Query: 866  DTA-MWTESADNTVETVMSQMHDLSFMLDSNLSIPK 970
            D     T S    VE +MSQMHDLSFML+S LS+P+
Sbjct: 478  DILDATTSSKAEDVEMLMSQMHDLSFMLESKLSVPQ 513


>ref|XP_002301615.1| predicted protein [Populus trichocarpa] gi|222843341|gb|EEE80888.1|
            predicted protein [Populus trichocarpa]
          Length = 518

 Score =  135 bits (340), Expect = 3e-29
 Identities = 108/346 (31%), Positives = 156/346 (45%), Gaps = 14/346 (4%)
 Frame = +2

Query: 2    EQLMTNKVVKFAEALAPPGQNNLSLFENTQSSEALSRPTAGAVDDPFSGWEDEFQSAGVR 181
            EQL  NK +      A  G  NLSLFEN Q SE +         D  SGWE EFQSA   
Sbjct: 192  EQLTLNKDMDATGGNAVQGHGNLSLFENVQPSETIGGSDKDVSGDWSSGWEAEFQSASSG 251

Query: 182  TLPVESKSLDFFSEASPIEFSSSLEAAVGLEAETKFGFDSIRNNVEENTTSVPHASMNDS 361
            T   ESK+ D F  +S ++ S+ +++  G         D       EN TS   ++    
Sbjct: 252  TQHRESKTSDPFVSSSSVDLSAHMDSVFGPAK------DIFEGKTNENATSSASSAF--- 302

Query: 362  WVQDDQWH--ASNIVLSTKTAQVEIKSEGTKVGEPTDKINSISSLDNNLFRDDLWQTGPE 535
              +DD W    + +    +  +++I  EG   G      N+ S ++ +   D+ WQT   
Sbjct: 303  --KDDLWSIPGTGVTGQDELFKLDINDEG---GGKRGTTNNSSMMNVDWIEDNQWQTTTT 357

Query: 536  KHR-------EDDESFDAWQDFTXXXXXXXXXXXXXXXXXXXXXXXXXXXKK--LVSSSH 688
                      E+D+SFDAW DF+                            +  L   S 
Sbjct: 358  SKSDENKTIDENDDSFDAWNDFSGSTSAQVPSNNSLKQDANHILPSVDQESEINLFGGSS 417

Query: 689  DFQEMEFGSFMSPGLFSGGTSINDGSTAMNNVK-EGSISDRLVEVNV--GGVKSIENANS 859
              Q+++FGSF  P  FSG  +  +GS+ +N ++ E S+SDR+  VN   G  + ++   +
Sbjct: 418  ISQDVDFGSFSQPDFFSGTLNNQNGSSEVNVMQTETSVSDRINSVNQDDGNTEDLKKGEN 477

Query: 860  SFDTAMWTESADNTVETVMSQMHDLSFMLDSNLSIPKKENGIDSLS 997
                   T S  + VE +MSQMHDLSFML+SNLS+P+K     S S
Sbjct: 478  -------TRSKADEVEMLMSQMHDLSFMLESNLSVPQKIEPFSSSS 516


>emb|CAN61787.1| hypothetical protein VITISV_006025 [Vitis vinifera]
          Length = 633

 Score =  108 bits (269), Expect = 4e-21
 Identities = 87/286 (30%), Positives = 122/286 (42%), Gaps = 12/286 (4%)
 Frame = +2

Query: 2    EQLMTNKVVKFAEALAPPGQNNLSLFENTQSSEALSRPTAGAVDDPFSGWEDEFQSAGVR 181
            EQ    K ++  E+ A  G  NLSLFEN   SE + RP        FSGWE EFQ+A   
Sbjct: 234  EQFAATKEIRSKESNALQGHENLSLFENVHPSETVVRPAEDKNSAAFSGWEAEFQNANSE 293

Query: 182  TLPVESKSLDFFSEASPIEFSSSLEAAVGLEAETKFGFDSIRNNVEENTTSVPHASMNDS 361
            ++   SK  D F   S ++ SS ++A  G       G D    +V ++TT    AS  + 
Sbjct: 294  SVHEGSKEFDPF-VGSTVDLSSHMDAVFG------SGKDINSAHVSDDTTP---ASRTND 343

Query: 362  WVQDDQWHASNIVLSTKTAQVEIKSEGTKVGEPTDKINSISSLDNNLFRDDLWQTGPEKH 541
            W+QDD +   N  +     QV    + T   E    +   SS  N+ F+DD W+    K 
Sbjct: 344  WIQDDLYKNLNSKVPAHVGQV----DSTIQAEDAQNLAGPSSTRNDWFQDDQWKNSSAKS 399

Query: 542  RE-------DDESFDAWQDF---TXXXXXXXXXXXXXXXXXXXXXXXXXXXKKLVSSSHD 691
             +       +D  FDAW DF   +                             L+SS+ +
Sbjct: 400  TDNKIALGKNDNLFDAWNDFPSSSTSQDPFRSSWKHNNGSSLTPSVEQTSEPNLLSSTSN 459

Query: 692  FQEMEFGSFMSPGLFSGG--TSINDGSTAMNNVKEGSISDRLVEVN 823
             QEMEFG+F      S G   + ND ST  N + E S S+R  + +
Sbjct: 460  LQEMEFGNFSQQEDLSSGADNNQNDSSTVSNMLPEASDSNRKADTS 505


>ref|XP_002529332.1| hypothetical protein RCOM_1016710 [Ricinus communis]
           gi|223531203|gb|EEF33049.1| hypothetical protein
           RCOM_1016710 [Ricinus communis]
          Length = 467

 Score =  106 bits (264), Expect = 2e-20
 Identities = 82/267 (30%), Positives = 124/267 (46%), Gaps = 7/267 (2%)
 Frame = +2

Query: 35  AEALAPPGQNNLSLFENTQSSEALSRPTAGAVDDPFSGWEDEFQSAGVRTLPVESKSLDF 214
           AE  A  G  NLSLFE+ + SE  +R       D FSGWE +FQS+G +T   +S   D 
Sbjct: 198 AENNAFQGHENLSLFESVEPSETAARSKKDESGDSFSGWEADFQSSGAKTQHQKSNFPDP 257

Query: 215 FSEASPIEFSSSLEAAVGLEAETKFGFDSIRNNVEENTTSVPHASMNDSWVQDDQWHASN 394
           F  +S ++ SS ++A  G       G +      +EN TS   ++MND W + D    +N
Sbjct: 258 FVGSSSVDLSSHMDALFGP------GSNLSNEKTKENVTSA--SNMND-WFERDTSSNAN 308

Query: 395 IVLSTKTAQVEIKSEGTKVGEPTDKINSISSLDNNLFRDDLWQTGPEKHR-----EDDES 559
             ++ +  Q E+     + G   +  NS SS++ +  +D+ WQT     +     E+D+S
Sbjct: 309 AGVAFQNDQFEVPVSDNRDGTVGNTGNS-SSMNVDWVQDNQWQTSSSSRKATDNDENDDS 367

Query: 560 FDAWQDFTXXXXXXXXXXXXXXXXXXXXXXXXXXXK-KLVSSSHDFQEMEFGSFMSPGLF 736
           FD W DFT                           +    S + + ++++FGSF  P  F
Sbjct: 368 FDTWNDFTSSSNVQVPSNNSLKGDIHTVPSVEQGSEISFFSGADNSKDIDFGSFSQPDFF 427

Query: 737 SGGTSINDGSTAMNN-VKEGSISDRLV 814
           S   S  +GS  M+  V E S+SDR V
Sbjct: 428 SATFSNQNGSAEMSTMVPESSVSDRYV 454


>ref|XP_003628559.1| GD3A [Medicago truncatula] gi|355522581|gb|AET03035.1| GD3A
           [Medicago truncatula]
          Length = 742

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 60/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
 Frame = +2

Query: 65  NLSLFENTQSSEALSRPTAGAVDDP----FSGWEDEFQSAGVRTLPVESKSLDFFSEASP 232
           NLSLF+N Q+SEA    + G+V+D     FSGWE  F+SA    +  ES S+D       
Sbjct: 212 NLSLFQNFQASEA----SGGSVEDQSGGSFSGWEANFKSASSAPVHKESNSVD------- 260

Query: 233 IEFSSSLEAAVGLEAETKFGFDSIRNNVEENTTSVPHASMNDSWVQDDQWHASNIVLSTK 412
                   + V L+  + +G DS  + V+EN    P AS  D W Q D++  SN  +  +
Sbjct: 261 -------HSKVELDTVSGYGKDS--DGVKENDDFNPSASGEDDWFQGDEFQTSNSKIDGQ 311

Query: 413 TAQVEIKSEGTKVGEPTDKINSISSLDNNLFRDDLWQTGPEK------HREDDESFDAWQ 574
             + E  ++   + E  +     S+ + +  +DD WQ    K        E+D+SFDAW 
Sbjct: 312 PGKSETTTDLYHM-EKEEIATGSSTRNLDWMQDDQWQESETKIPNIGATDEEDDSFDAWN 370

Query: 575 DFT 583
           DFT
Sbjct: 371 DFT 373


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