BLASTX nr result
ID: Coptis21_contig00011868
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00011868
(1159 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002317422.1| predicted protein [Populus trichocarpa] gi|2... 455 e-126
emb|CBI20194.3| unnamed protein product [Vitis vinifera] 408 e-111
ref|XP_002285446.2| PREDICTED: epidermis-specific secreted glyco... 392 e-107
dbj|BAD24818.1| cell attachment protein in somatic embryogenesis... 381 e-103
emb|CAN75015.1| hypothetical protein VITISV_035367 [Vitis vinifera] 381 e-103
>ref|XP_002317422.1| predicted protein [Populus trichocarpa] gi|222860487|gb|EEE98034.1|
predicted protein [Populus trichocarpa]
Length = 414
Score = 455 bits (1171), Expect = e-126
Identities = 211/333 (63%), Positives = 265/333 (79%), Gaps = 6/333 (1%)
Frame = -3
Query: 1157 LTFGTDGNLVLADANGKIAWQTRTSNKGVVGLKLLPNGNLVLHDSRGRFVWQSFDYPTDT 978
L+F DGNL+L D +G IAWQT T+NKGVVGL LLP+GNLVL+D RG+F+WQSFD+PTDT
Sbjct: 83 LSFKRDGNLILTDFDGTIAWQTGTANKGVVGLNLLPDGNLVLYDQRGKFIWQSFDHPTDT 142
Query: 977 LLVGQSLRQGGQTKLVSRVSDADGSEGPYSFVLEKKRIAMYLKSKNSPTPILYHIAEEFD 798
LLVGQ+LR G +LVSRVS+ DGS GPYSFV+E++ A+Y K KNSP P+LY+ ++EF
Sbjct: 143 LLVGQNLRSSGPNRLVSRVSNMDGSLGPYSFVMEQRYWALYYKVKNSPKPLLYYKSDEFG 202
Query: 797 PSQGTMSSVVFNSAPETDEAFAYRLGY------ETEGGTWLVGRPKYNSTLSMLRVGSDG 636
QG+++ + F PE ++A+A+ +G+ GT+++ RPKYNST SMLR+ SDG
Sbjct: 203 NGQGSLAHLNFYCKPEYEQAYAFEVGFTYDMNNSPSSGTYILTRPKYNSTYSMLRLESDG 262
Query: 635 SLKVYTYYDKVDLRAWEITYSLFDKDGVYGVSECRSPTRCGSLGVCEDSQCVACPRPQGL 456
+LK+YTY + VD AW++T+ LFD+D +SEC+ P RCGSLGVCED+QCVACPRPQG
Sbjct: 263 NLKIYTYNENVDWGAWDLTFKLFDRDSDLEISECKLPQRCGSLGVCEDNQCVACPRPQGF 322
Query: 455 LGWSKTCAPPSLPPCKSGAQNIDYYKVVGVEHFTYEYSQGVGPMKLADCRDKCSKDCGCL 276
LGWSK+CAPP LPPCK GA N+DYYKVVGVEHF Y++G GPMKL DCR+KC+ DCGCL
Sbjct: 323 LGWSKSCAPPVLPPCKGGA-NVDYYKVVGVEHFLNGYNEGEGPMKLVDCRNKCNNDCGCL 381
Query: 275 GFLYREESSKCLLAPVLGTLAKVSNPAHVAYIK 177
GF Y+EESSKCLLAPVLGTL VS+P+HV +IK
Sbjct: 382 GFFYKEESSKCLLAPVLGTLVGVSSPSHVGFIK 414
>emb|CBI20194.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 408 bits (1049), Expect = e-111
Identities = 197/335 (58%), Positives = 247/335 (73%), Gaps = 8/335 (2%)
Frame = -3
Query: 1157 LTFGTDGNLVLADANGKIAWQTRTSNKGVVGLKLLPNGNLVLHDSRGRFVWQSFDYPTDT 978
LTFGTDGNLVLA A+G++AWQT T+NKGVVGL+LLP GNLVL+DS+G+F+WQSFDYPTDT
Sbjct: 28 LTFGTDGNLVLAHADGRVAWQTGTANKGVVGLRLLPTGNLVLYDSKGKFIWQSFDYPTDT 87
Query: 977 LLVGQSLRQGGQTKLVSRVSDADGSEGPYSFVLEKKRIAMYLKSKNSPTPILYHIAEE-F 801
LLVGQSLR GG TKLVSR S+AD S+G YS V+E KR+AMY K+ NSP PILY + F
Sbjct: 88 LLVGQSLRAGGVTKLVSRASEADNSDGKYSLVMEPKRLAMYYKATNSPKPILYATSSVWF 147
Query: 800 DPSQGTMSSVVFNSAPETDEAFAYRL-------GYETEGGTWLVGRPKYNSTLSMLRVGS 642
+G++++V +P+TDE +AY L + G ++ RPKYNSTL++LR+G
Sbjct: 148 TIDKGSLTNVTLTCSPDTDEGYAYNLILDYYVSNSQNPSGNRILVRPKYNSTLTILRLGI 207
Query: 641 DGSLKVYTYYDKVDLRAWEITYSLFDKDGVYGVSECRSPTRCGSLGVCEDSQCVACPRPQ 462
DG++++YTYYDKVD RAWE+TY+LFD+D +EC+ P RCG G+CED+QCVACP P+
Sbjct: 208 DGNIRLYTYYDKVDWRAWEVTYTLFDRDS-DEETECQLPERCGKFGLCEDNQCVACPSPK 266
Query: 461 GLLGWSKTCAPPSLPPCKSGAQNIDYYKVVGVEHFTYEYSQGVGPMKLADCRDKCSKDCG 282
GL+GWSK CAP L C G + YYK+ GV+HF +YS G GPMK C DKCSKDC
Sbjct: 267 GLMGWSKDCAPLKLSGC--GVNDFHYYKLEGVDHFMNKYSNGDGPMKEKQCSDKCSKDCK 324
Query: 281 CLGFLYREESSKCLLAPVLGTLAKVSNPAHVAYIK 177
CLG+ Y S+C +A L TL KV N H+AYIK
Sbjct: 325 CLGYFYHTLESRCWIAYDLNTLTKVQNSTHLAYIK 359
>ref|XP_002285446.2| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Vitis
vinifera]
Length = 429
Score = 392 bits (1008), Expect = e-107
Identities = 191/328 (58%), Positives = 239/328 (72%), Gaps = 1/328 (0%)
Frame = -3
Query: 1157 LTFGTDGNLVLADANGKIAWQTRTSNKGVVGLKLLPNGNLVLHDSRGRFVWQSFDYPTDT 978
LTFGTDGNLVLA A+G++AWQT T+NKGVVGL+LLP GNLVL+DS+G+F+WQSFDYPTDT
Sbjct: 108 LTFGTDGNLVLAHADGRVAWQTGTANKGVVGLRLLPTGNLVLYDSKGKFIWQSFDYPTDT 167
Query: 977 LLVGQSLRQGGQTKLVSRVSDADGSEGPYSFVLEKKRIAMYLKSKNSPTPILYHIAEE-F 801
LLVGQSLR GG TKLVSR S+AD S+G YS V+E KR+AMY K+ NSP PILY + F
Sbjct: 168 LLVGQSLRAGGVTKLVSRASEADNSDGKYSLVMEPKRLAMYYKATNSPKPILYATSSVWF 227
Query: 800 DPSQGTMSSVVFNSAPETDEAFAYRLGYETEGGTWLVGRPKYNSTLSMLRVGSDGSLKVY 621
+G++++V + Y + G ++ RPKYNSTL++LR+G DG++++Y
Sbjct: 228 TIDKGSLTNVTL--------TYYYVSNSQNPSGNRILVRPKYNSTLTILRLGIDGNIRLY 279
Query: 620 TYYDKVDLRAWEITYSLFDKDGVYGVSECRSPTRCGSLGVCEDSQCVACPRPQGLLGWSK 441
TYYDKVD RAWE+TY+LFD+D +EC+ P RCG G+CED+QCVACP P+GL+GWSK
Sbjct: 280 TYYDKVDWRAWEVTYTLFDRDS-DEETECQLPERCGKFGLCEDNQCVACPSPKGLMGWSK 338
Query: 440 TCAPPSLPPCKSGAQNIDYYKVVGVEHFTYEYSQGVGPMKLADCRDKCSKDCGCLGFLYR 261
CAP L C G + YYK+ GV+HF +YS G GPMK C DKCSKDC CLG+ Y
Sbjct: 339 DCAPLKLSGC--GVNDFHYYKLEGVDHFMNKYSNGDGPMKEKQCSDKCSKDCKCLGYFYH 396
Query: 260 EESSKCLLAPVLGTLAKVSNPAHVAYIK 177
S+C +A L TL KV N H+AYIK
Sbjct: 397 TLESRCWIAYDLNTLTKVQNSTHLAYIK 424
>dbj|BAD24818.1| cell attachment protein in somatic embryogenesis [Daucus carota]
gi|55785663|dbj|BAD72577.1| cell attachment protein in
somatic embryogenesis [Daucus carota]
Length = 443
Score = 381 bits (979), Expect = e-103
Identities = 196/341 (57%), Positives = 237/341 (69%), Gaps = 11/341 (3%)
Frame = -3
Query: 1157 LTFGTDGNLVLADANGKIAWQTRTSNKGVVGLKLLPNGNLVLHDSRGRFVWQSFDYPTDT 978
LTFGTDGNLVLAD +G +AW+T T+NK VV L+LL NGNLVL DS+G+FVWQSFD+PTDT
Sbjct: 107 LTFGTDGNLVLADVDGTVAWETGTANKDVVRLELLTNGNLVLIDSKGKFVWQSFDHPTDT 166
Query: 977 LLVGQSLRQGGQTKLVSRVSDADGSEGPYSFVLEKKRIAMYLKSKNSPTPILYHIAEEFD 798
LLVGQSL G K+VSR+SD + S+GPYS+V+EK ++++Y K N TPILY F
Sbjct: 167 LLVGQSLVSSGANKIVSRLSDVEASDGPYSYVMEKSQLSLYYKPANVKTPILYD-QTVFG 225
Query: 797 PSQGTMSSVVFNSAP----ETDEAFAYRLGYET-------EGGTWLVGRPKYNSTLSMLR 651
+ T++ + F P E+D +A E+ G+ ++ R KYN+T SMLR
Sbjct: 226 TGKDTLTKIQFTIDPFTNIESDTVWANEFHLESFMNNSTESSGSAVLSRAKYNTTYSMLR 285
Query: 650 VGSDGSLKVYTYYDKVDLRAWEITYSLFDKDGVYGVSECRSPTRCGSLGVCEDSQCVACP 471
V SDG+L+VYTY + VD AWE+TY LFD+D SEC+ P RCG+LGVC D QCVACP
Sbjct: 286 VDSDGNLRVYTYEEHVDYGAWEVTYVLFDRD-EGRESECKLPQRCGALGVCSDDQCVACP 344
Query: 470 RPQGLLGWSKTCAPPSLPPCKSGAQNIDYYKVVGVEHFTYEYSQGVGPMKLADCRDKCSK 291
GL GWSKTCAPP LP C GA IDYYKV GVEHFT + G LADCR KC
Sbjct: 345 TANGLTGWSKTCAPPVLPACGKGA--IDYYKVAGVEHFTNGVTSGTPRSTLADCRKKCDS 402
Query: 290 DCGCLGFLYREESSKCLLAPVLGTLAKVSNPAHVAYIKKSK 168
DC C+GF YREESS CLLA VLG L +V+N +HVAYIK SK
Sbjct: 403 DCKCVGFFYREESSTCLLASVLGALNQVANASHVAYIKMSK 443
>emb|CAN75015.1| hypothetical protein VITISV_035367 [Vitis vinifera]
Length = 444
Score = 381 bits (979), Expect = e-103
Identities = 186/334 (55%), Positives = 237/334 (70%), Gaps = 7/334 (2%)
Frame = -3
Query: 1157 LTFGTDGNLVLADANGKIAWQTRTSNKGVVGLKLLPNGNLVLHDSRGRFVWQSFDYPTDT 978
LTFGTDGNLVLA+A+G++AWQT T+NKGVVGLKLL NGNLVLHDS+G+F+WQSFDYPTD
Sbjct: 109 LTFGTDGNLVLANADGRVAWQTGTANKGVVGLKLLSNGNLVLHDSKGKFIWQSFDYPTDV 168
Query: 977 LLVGQSLRQGGQTKLVSRVSDADGSEGPYSFVLEKKRIAMYLKSKNSPTPILYHIAEE-F 801
LLV QSLR GG TKLVSR S AD S+G YS V+E KR+AMY K NSP PILY + F
Sbjct: 169 LLVDQSLRVGGVTKLVSRASAADNSDGKYSLVMEPKRLAMYYKGTNSPKPILYATSSVWF 228
Query: 800 DPSQGTMSSVVFNSAPE-TDEAFAYRLGYETEGGTWLVG-----RPKYNSTLSMLRVGSD 639
+G++ +V +P+ A+ L Y + G RPKYNST + LR+ D
Sbjct: 229 TIDKGSLQNVTLTGSPDGLGYAYYLNLNYHLSNSPYPTGGRILVRPKYNSTSTFLRLDMD 288
Query: 638 GSLKVYTYYDKVDLRAWEITYSLFDKDGVYGVSECRSPTRCGSLGVCEDSQCVACPRPQG 459
G++++YTY+DKVD + W++TY+LFD+D +EC+ P RC G+CEDSQC+ACP P+G
Sbjct: 289 GNIRLYTYFDKVDYQGWQVTYTLFDRDS-GDETECQLPERCRKFGLCEDSQCIACPSPKG 347
Query: 458 LLGWSKTCAPPSLPPCKSGAQNIDYYKVVGVEHFTYEYSQGVGPMKLADCRDKCSKDCGC 279
L+GWSK CAP L C G ++ YYK+ GV+HFT +YS+G GPMK C DKC++DC C
Sbjct: 348 LMGWSKDCAPLKLSGC--GVKDFHYYKLEGVDHFTSKYSKGDGPMKEKQCSDKCTRDCKC 405
Query: 278 LGFLYREESSKCLLAPVLGTLAKVSNPAHVAYIK 177
LG+ Y +S+C +A L TL KV N H+AYIK
Sbjct: 406 LGYFYHTLTSRCWIAYDLNTLTKVQNSTHLAYIK 439