BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011856
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   246   7e-63
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   224   3e-56
ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   220   4e-55
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   217   3e-54
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...   211   3e-52

>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  246 bits (627), Expect = 7e-63
 Identities = 129/244 (52%), Positives = 170/244 (69%), Gaps = 1/244 (0%)
 Frame = -3

Query: 900 DPELRNWLELPRDVXXXXXXXXXXXXXLCNAQSVCSTWRSLSKQPHLFRSIDMRSHRDFP 721
           + E RNW ELPRDV             L +AQ VCS WR L ++P ++R+IDM +  D  
Sbjct: 14  EEEERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGDLC 73

Query: 720 DGDYEKMRKSAKEAVDRSCGELVEFSMARFGNDELLHYIVDKSSMIKCLRLVCCY-ISNE 544
           D  Y+ + + A+ AVDRS G+L+   +  F  D LL+YI+D+SS I+ LRLV CY IS++
Sbjct: 74  DLGYD-LEEMARHAVDRSGGQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVSCYGISDD 132

Query: 543 ALIEVLKKTHCLEEIELCYSTFSKEVIEEVGRNCCELKSFRLNCQGYRYPRLESDEEAFA 364
            L E +K+   L EI+LCY +FSKEV+E +G+ C  LKSFRLNCQG+R+P +E DEEA A
Sbjct: 133 GLSEGIKRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPHIECDEEALA 192

Query: 363 IAENMPQLRSLHLFGNKLTNVGLEAILDKCPYLEYLDLRECFGLDLNGDLEKKCVERIKS 184
           IA+NMP L+SL LFGNKLTN GL AILD C +LE LDLR+CF ++L G+L K+C E+IK 
Sbjct: 193 IAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRCAEQIKI 252

Query: 183 VRLP 172
           +R P
Sbjct: 253 LRYP 256


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  224 bits (570), Expect = 3e-56
 Identities = 118/242 (48%), Positives = 156/242 (64%), Gaps = 1/242 (0%)
 Frame = -3

Query: 894 ELRNWLELPRDVXXXXXXXXXXXXXLCNAQSVCSTWRSLSKQPHLFRSIDMRSHRDFPDG 715
           E RNWL+LPRDV             L  AQ VCS WR++SK+P L+R+IDMR+  D   G
Sbjct: 10  EERNWLDLPRDVLCTIFQKLGATEILTRAQGVCSVWRAISKEPLLWRTIDMRNLGDI--G 67

Query: 714 DYEKMRKSAKEAVDRSCGELVEFSMARFGNDELLHYIVDKSSMIKCLRLVCCY-ISNEAL 538
               +      A+D S G L+  ++  FG D+LLH+I   +S ++ LRL CCY IS+E L
Sbjct: 68  LDFHLLAMCHRAIDYSSGHLLHINVEYFGTDDLLHHITHSTSNLRSLRLACCYQISDEGL 127

Query: 537 IEVLKKTHCLEEIELCYSTFSKEVIEEVGRNCCELKSFRLNCQGYRYPRLESDEEAFAIA 358
            E+ +K   LEE+++  S  +K+ +E +G+ C  LK+ + N +GYR P +E DEEAFAIA
Sbjct: 128 CEIAEKLPQLEELDISISNLTKDPLEAIGQCCPHLKTLKFNMEGYRRPHIECDEEAFAIA 187

Query: 357 ENMPQLRSLHLFGNKLTNVGLEAILDKCPYLEYLDLRECFGLDLNGDLEKKCVERIKSVR 178
           E MP L  L LFGNKLTN GL AILD CP LE LDLR+CF ++L G L K+C E+IK +R
Sbjct: 188 ETMPGLHHLQLFGNKLTNEGLLAILDGCPLLESLDLRQCFNVNLAGSLGKRCAEQIKELR 247

Query: 177 LP 172
           LP
Sbjct: 248 LP 249


>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  220 bits (560), Expect = 4e-55
 Identities = 122/248 (49%), Positives = 157/248 (63%), Gaps = 1/248 (0%)
 Frame = -3

Query: 912 PAITDPELRNWLELPRDVXXXXXXXXXXXXXLCNAQSVCSTWRSLSKQPHLFRSIDMRSH 733
           P   + E RNWLELP DV             L  AQ VCS+WR + + P ++R IDMR  
Sbjct: 7   PNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYP 66

Query: 732 RDFPDGDYEKMRKSAKEAVDRSCGELVEFSMARFGNDELLHYIVDKSSMIKCLRLVCCY- 556
            D+ D DY  + +  ++AV RSCG+L+ F++  FG D+LL YI    + +  LRLV C  
Sbjct: 67  CDWWDMDYN-LEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNR 125

Query: 555 ISNEALIEVLKKTHCLEEIELCYSTFSKEVIEEVGRNCCELKSFRLNCQGYRYPRLESDE 376
           IS+E L+E + K   LE++EL + +F  E +E +G+NC  LKS +LN Q YR  R+E D+
Sbjct: 126 ISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYR--RVECDK 183

Query: 375 EAFAIAENMPQLRSLHLFGNKLTNVGLEAILDKCPYLEYLDLRECFGLDLNGDLEKKCVE 196
            A AIAENMP LR LH+FGN LTN GLEAILD C  LE LDLR CF L+L G L  KC E
Sbjct: 184 GALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAKCSE 243

Query: 195 RIKSVRLP 172
           +IK +RLP
Sbjct: 244 KIKDLRLP 251


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  217 bits (553), Expect = 3e-54
 Identities = 119/247 (48%), Positives = 156/247 (63%), Gaps = 6/247 (2%)
 Frame = -3

Query: 894 ELRNWLELPRDVXXXXXXXXXXXXXLCNAQSVCSTWRSLSKQPHLFRSIDMRSHRDFPDG 715
           E RNWL+LPRDV             L  AQ VCS WR +SK+P L+R+IDMR+      G
Sbjct: 16  EERNWLDLPRDVVCTIFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTIDMRN-----SG 70

Query: 714 DYEK---MRKSAKEAVDRSCGELVEFSMARFGNDELLHYIVDKSSMIKCLRLVCCY-ISN 547
           D E           A+D S G L+  ++  F  D+LL +I   +S ++ LRL CCY IS+
Sbjct: 71  DIETNFVFLAMCHRAIDYSSGHLLHINIEYFATDDLLRHITHSTSNLRSLRLACCYQISD 130

Query: 546 EALIEVLKKTHCLEEIELCYSTFS--KEVIEEVGRNCCELKSFRLNCQGYRYPRLESDEE 373
           E L E+ K+   LEE+++  S+F+  ++ +E VGR C  LK+ + N +GYR P +E DEE
Sbjct: 131 EGLCEIAKELPQLEELDISISSFNPTRDPLEAVGRCCRHLKTLKFNMKGYRRPHIECDEE 190

Query: 372 AFAIAENMPQLRSLHLFGNKLTNVGLEAILDKCPYLEYLDLRECFGLDLNGDLEKKCVER 193
           AFAIAE MP L  L LFGNKLTN GL AILD CP+LE LDLR+CF ++L G L K+C E+
Sbjct: 191 AFAIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAEQ 250

Query: 192 IKSVRLP 172
           IK +RLP
Sbjct: 251 IKELRLP 257


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score =  211 bits (536), Expect = 3e-52
 Identities = 112/248 (45%), Positives = 156/248 (62%), Gaps = 1/248 (0%)
 Frame = -3

Query: 912 PAITDPELRNWLELPRDVXXXXXXXXXXXXXLCNAQSVCSTWRSLSKQPHLFRSIDMRSH 733
           P + +   RNW ELPRDV             L +AQ VCS+W S+ K P ++RS+++   
Sbjct: 9   PQLQEDSYRNWAELPRDVTALILDKVGAFDILGSAQFVCSSWNSVCKDPSMWRSVEIHPL 68

Query: 732 RDFPDGDYEKMRKSAKEAVDRSCGELVEFSMARFGNDELLHYIVDKSSMIKCLRLVCCY- 556
            DF D  ++ +    + AVDRS G L+  S+  F  D L+ YI D+SS +K LRL+  Y 
Sbjct: 69  CDFWDLPFD-LEALCRNAVDRSRGGLISISIEYFATDSLIKYIADRSSHLKRLRLLSSYT 127

Query: 555 ISNEALIEVLKKTHCLEEIELCYSTFSKEVIEEVGRNCCELKSFRLNCQGYRYPRLESDE 376
           +S+ A  +  KK   LEE+++ Y + S E +  VG +C  L+S +LNCQGY+ P +ES+E
Sbjct: 128 LSDAAFSKAAKKFPLLEELDISYCSLSTEALVGVGISCPLLRSLKLNCQGYKRPHIESNE 187

Query: 375 EAFAIAENMPQLRSLHLFGNKLTNVGLEAILDKCPYLEYLDLRECFGLDLNGDLEKKCVE 196
           EA AI + MP LR L +FGNKLTN G++AILD CP+LE+LDLR+CF + L G+L   C E
Sbjct: 188 EALAIGQWMPHLRYLQIFGNKLTNDGVQAILDGCPHLEFLDLRQCFNVHLEGELGMLCGE 247

Query: 195 RIKSVRLP 172
           RIK +R P
Sbjct: 248 RIKDLRRP 255