BLASTX nr result

ID: Coptis21_contig00011847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011847
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270044.1| PREDICTED: uncharacterized protein LOC100251...   264   3e-68
ref|XP_002331562.1| predicted protein [Populus trichocarpa] gi|1...   229   1e-57
ref|XP_002518417.1| conserved hypothetical protein [Ricinus comm...   228   3e-57
ref|XP_004134782.1| PREDICTED: uncharacterized protein LOC101203...   227   6e-57
gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]   221   3e-55

>ref|XP_002270044.1| PREDICTED: uncharacterized protein LOC100251709 [Vitis vinifera]
          Length = 340

 Score =  264 bits (675), Expect = 3e-68
 Identities = 171/341 (50%), Positives = 199/341 (58%), Gaps = 30/341 (8%)
 Frame = -1

Query: 1080 PQTLSSSNSVRKRSNDPNSPEFEFWMVRNPSCPQPHLLSADELIADGVLLPLHLISQDP- 904
            PQTLS S+S R RS+D NSPEFEFWMVRNPS PQP+LLSADEL  DGVLLPLHL+  +P 
Sbjct: 10   PQTLSPSSSGR-RSSDSNSPEFEFWMVRNPSFPQPNLLSADELFVDGVLLPLHLLRHNPD 68

Query: 903  --KP----------NSVXXXXXXXXXXXXXXXXXXXXXXXXSKRWRDIFKIXXXXXXXXX 760
              KP          +                          SKRW+DIFK          
Sbjct: 69   SSKPVQELNSEAPDSEPPIPDTEPEPGPGPEISSAAPASTASKRWKDIFK-----KGEKK 123

Query: 759  XXXXXXXXXXXXXXXXXXXXXXXXSAAELNINIWPFSRSWSAGN---RPKLSNGSV-SRK 592
                                    S+AELNINIWPFSRS SAGN   RP+++ G   +RK
Sbjct: 124  SAKNGEDKEKEKEKKKERKSGSGASSAELNINIWPFSRSRSAGNNAVRPRMAAGGAGTRK 183

Query: 591  VSSAPCSRSNSAGESKSRKWPNSPSRGGGIHLGRNSPVWQVRRGASGLRNTEPVVRNNVE 412
            VSSAPCSRSNSAGESKSRKWP+SP R  G+HLGR+SPVWQVRRG S  ++ EP+VR N E
Sbjct: 184  VSSAPCSRSNSAGESKSRKWPSSPGR-PGVHLGRSSPVWQVRRGGSASKSLEPLVR-NAE 241

Query: 411  KSGLRKGGLRSKNINNR----GGDVGASKGRVLNLNVPMCIGYRQQLSCRTNENVLVGGG 244
            K   ++G   S+N  NR        G  K RVLNLNVPMCIGYR  LSCR++EN  +G  
Sbjct: 242  KGSKKEG---SENRRNRTPAPAPPAGIPKARVLNLNVPMCIGYRHHLSCRSDENSTIGTS 298

Query: 243  ---GSENGVASITTG------GAVGANSKLFNLRTLFTKKI 148
               GS  G A  + G      G VG+ S LFNLR+LFTKK+
Sbjct: 299  HTIGSRGGGAGASMGNGGGGSGNVGSASNLFNLRSLFTKKV 339


>ref|XP_002331562.1| predicted protein [Populus trichocarpa] gi|118484607|gb|ABK94177.1|
            unknown [Populus trichocarpa] gi|222873786|gb|EEF10917.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  229 bits (584), Expect = 1e-57
 Identities = 158/350 (45%), Positives = 199/350 (56%), Gaps = 37/350 (10%)
 Frame = -1

Query: 1086 KRPQTL----SSSNSVRKRSNDPNSPEFEFWMVRNPSCPQPHLLSADELIADGVLLPLHL 919
            K PQ +    SS+   R+ S   NSPEFEFWMVRNPS PQP+L+SADEL  DGVLLPLHL
Sbjct: 10   KEPQVILSPCSSARRRRRTSTCSNSPEFEFWMVRNPSFPQPNLVSADELFVDGVLLPLHL 69

Query: 918  ISQ----------DPKPNSVXXXXXXXXXXXXXXXXXXXXXXXXS---KRWRD-IFKIXX 781
            + Q          DP P+S                         +   KRW+D IFK   
Sbjct: 70   LHQPNNNTNNSHPDPDPDSPEPEPPNAQPDPGPEISPASITIEPTSSSKRWKDMIFKKGD 129

Query: 780  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAELNI-NIWPFSRSWSAGN---RPKLS 613
                                           S+AELNI NIWPFSRS SAGN   RPKL 
Sbjct: 130  KKTSTAAKKQEEKDKDRDRDKKREKRSQSGASSAELNIINIWPFSRSRSAGNSVTRPKLF 189

Query: 612  NGSV-SRKVSSAPCSRSNSAGESKSRK-WPNSPSRGGGIHLGRNSPVWQVRR-GASGLRN 442
             G+  +RKVSSAPCSRSNSAGESKSRK WP+SPSR  G+H+GR+SPVWQ RR G+SG+++
Sbjct: 190  PGAPGTRKVSSAPCSRSNSAGESKSRKSWPSSPSR-PGVHVGRSSPVWQARRGGSSGMKS 248

Query: 441  T--EPVVRNNVEKSGLRKGGLRSKNINNRGGDVGASKGRVLNLNVPMCIGYRQQLSCRTN 268
            +  E VVR+  + S  ++     +  N   G+ G+++ +VLN+NVP+CIGYR  LSCR++
Sbjct: 249  SFPEAVVRSGEKLSSKKEVTEPGRGKNIASGN-GSTRAKVLNINVPVCIGYRNHLSCRSD 307

Query: 267  ENVLVGGGGSENG--VASITTGGA--------VGANSKLFNLRTLFTKKI 148
            EN  +G  GS  G  VA  +T G+        VG    LFN R+LF+KK+
Sbjct: 308  ENSAIGARGSGGGKNVAGGSTDGSSATNSTINVGNGGNLFNFRSLFSKKV 357


>ref|XP_002518417.1| conserved hypothetical protein [Ricinus communis]
            gi|223542262|gb|EEF43804.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 358

 Score =  228 bits (580), Expect = 3e-57
 Identities = 154/349 (44%), Positives = 186/349 (53%), Gaps = 44/349 (12%)
 Frame = -1

Query: 1062 SNSVRKRSNDPNSPEFEFWMVRNPSCPQPHLLSADELIADGVLLPLHLI----------- 916
            ++S R+RS+D NSPEFEFW V NPS P+P++LSADEL  DGVLLPLHL+           
Sbjct: 18   TSSGRRRSSDSNSPEFEFWRVPNPSFPEPNILSADELFVDGVLLPLHLLHLHNHNHDPGP 77

Query: 915  SQDPKP-NSVXXXXXXXXXXXXXXXXXXXXXXXXSKRWRDIFKIXXXXXXXXXXXXXXXX 739
              DP+P NS                         SKRW+DIFK                 
Sbjct: 78   QPDPEPPNSQSEKPGPQISHKSIAAESVGTPLTASKRWKDIFK-KGENKATSSKNQRDKD 136

Query: 738  XXXXXXXXXXXXXXXXXSAAELNINIWPFSRSWSAGN---RPKLSNGSVSRKVSSAPCSR 568
                             S+AELNINIWPFSRS SAGN   RP +  G+ +RKVSSAPCSR
Sbjct: 137  NDREKKKEKKNQSGATSSSAELNINIWPFSRSRSAGNSGARPTMFPGT-TRKVSSAPCSR 195

Query: 567  SNSAGESKSRKWPNSPSRGGGIHLGRNSPVWQVRRGASGLR----NTEPVVRNNVEKSGL 400
            SNSAGESKSRKWP+SP R    HLGR+SPVWQ RRG+ G R    NTE  V  + EK   
Sbjct: 196  SNSAGESKSRKWPSSPGRA---HLGRSSPVWQARRGSGGSRTKTSNTEAPVSRSSEKMAS 252

Query: 399  RK-----GGLRSKNINNRGGDVGASKGRVLNLNVPMCIGYRQQLSCRTNENVLVGGGG-- 241
            +K     GG   +N    G +   SK +V+NLNVPMC+ YRQ LSCR++EN   G     
Sbjct: 253  KKKVSVSGGEHRRNKTTIGDN---SKRKVVNLNVPMCMAYRQHLSCRSDENSATGISNTT 309

Query: 240  ------------------SENGVASITTGGAVGANSKLFNLRTLFTKKI 148
                              S N ++S  +  A G  + LFNLR+LFTKK+
Sbjct: 310  STSITITATAIAEATIVDSSNSISSTASNLATGGGN-LFNLRSLFTKKV 357


>ref|XP_004134782.1| PREDICTED: uncharacterized protein LOC101203369 [Cucumis sativus]
            gi|449518021|ref|XP_004166042.1| PREDICTED:
            uncharacterized protein LOC101223271 [Cucumis sativus]
          Length = 332

 Score =  227 bits (578), Expect = 6e-57
 Identities = 149/326 (45%), Positives = 176/326 (53%), Gaps = 31/326 (9%)
 Frame = -1

Query: 1032 PNSPEFEFWMVRNPSCPQPHLLSADELIADGVLLPLHLI-------SQDP--KPNSVXXX 880
            P SPEFEFWMVRNPS PQ +LLSADEL  DGVLLPLHL+       S DP  KP+     
Sbjct: 14   PTSPEFEFWMVRNPSFPQTNLLSADELFVDGVLLPLHLLPNHSPSPSTDPNQKPHLEPPP 73

Query: 879  XXXXXXXXXXXXXXXXXXXXXSKRWRDIFKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 700
                                 SKRW  IFK                              
Sbjct: 74   SEPDPSDGPKLTPNSTDSGSSSKRW-SIFK------KSEKKNTSGNQEDRDKEKKKEKKT 126

Query: 699  XXXXSAAELNINIWPFSRSWSAGN---RPKLSNGSV--SRKVSSAPCSRSNSAGESKSRK 535
                ++AELNINIWPFSRS SAGN   RPKL  G+   SRKV+SAPCSRSNSAGESKSRK
Sbjct: 127  TNGSTSAELNINIWPFSRSRSAGNAFTRPKLFPGAQPGSRKVNSAPCSRSNSAGESKSRK 186

Query: 534  WPNSPSRGGGIHLGRNSPVWQVRRGASGLRNTEPVVRNNVEKSGLRKGGLRSKNINNRGG 355
            WP+SPSR GG+HLGR+SPVWQVRRG S  +  E   RN  + +      +          
Sbjct: 187  WPSSPSR-GGVHLGRSSPVWQVRRGGSVPKTPETFSRNADKPARKEPSEVHRSKAATAAA 245

Query: 354  DVGASKGRVLNLNVPMCIGYRQQLSCRTNENVLVGGGGSENGVASITTGGAVG------- 196
               AS+ RVLNLNVPMCIGYR  LSCR++E   +G  GS  G +S  +GG+ G       
Sbjct: 246  SSSASRVRVLNLNVPMCIGYRNHLSCRSDETSALGVIGSGGGGSSSNSGGSHGYDNNGDG 305

Query: 195  ----------ANSKLFNLRTLFTKKI 148
                      + + LF++R+LFTKK+
Sbjct: 306  SAVSNPGNSSSTANLFSIRSLFTKKV 331


>gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]
          Length = 347

 Score =  221 bits (563), Expect = 3e-55
 Identities = 148/350 (42%), Positives = 188/350 (53%), Gaps = 39/350 (11%)
 Frame = -1

Query: 1083 RPQTLSSSNSVRKRSNDPNSPEFEFWMVRNPSCPQPHLLSADELIADGVLLPLHLI---- 916
            +PQTLS + +    +++ NSPEFEFWM+RNPS PQP+L +AD+L  +GV+LPLHL+    
Sbjct: 6    KPQTLSPNTT----NSNCNSPEFEFWMLRNPSFPQPNLHTADQLFVNGVILPLHLLPTTS 61

Query: 915  --------------------SQDPKPNSVXXXXXXXXXXXXXXXXXXXXXXXXSKRWRDI 796
                                  DP+P+S                         SKRW+DI
Sbjct: 62   KTDPPPQTPTSNPSSHNPVSEPDPEPDS----SHPESSPVITESSSSASTFSGSKRWKDI 117

Query: 795  FKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--AAELNINIWPFSRSWSAGN-- 628
            F+                                  +  AAELNINIWPFSRS SAGN  
Sbjct: 118  FRKGEKNNTEDKEKEKEKEKEKKNKDKKKERKNGNGANSAAELNINIWPFSRSRSAGNTT 177

Query: 627  -RPKLSNGS-VSRKVSSAPCSRSNSAGESKSRKWPNSPSRGGGIHLGRNSPVWQVRRGAS 454
             RPK   G+ V+RKV+SAPCSRSNSAGESKSRKWP+SP R  G+H+GRNSPVWQVRRG  
Sbjct: 178  TRPKFFTGAPVTRKVNSAPCSRSNSAGESKSRKWPSSPGR-AGVHVGRNSPVWQVRRGGG 236

Query: 453  GLRNTEPVVRNNVEKSGLRKGGL--RSKNINNRGGDVGASKGRVLNLNVPMCIGYRQQLS 280
               + +    +N +K   ++  +  RSK ++  GG     K +VL+LNVPMCIGYR  LS
Sbjct: 237  KNSDQQTQQGSNTDKELKKEATVSRRSKVVSGGGG-----KAKVLSLNVPMCIGYRHHLS 291

Query: 279  CRTNENVLVG--GGGSENGVASITTGGAV-----GANSKLFNLRTLFTKK 151
            CR++EN  +G  GG + N       GG       G+   LFNLR LFTKK
Sbjct: 292  CRSDENSAIGVSGGVAVNRGGGDGGGGECHHHDEGSGGNLFNLRNLFTKK 341


Top