BLASTX nr result

ID: Coptis21_contig00011845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011845
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001768291.1| predicted protein [Physcomitrella patens sub...   138   6e-31
ref|XP_001782595.1| predicted protein [Physcomitrella patens sub...   132   4e-29
ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote...   131   7e-29
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]   131   7e-29
ref|XP_002963537.1| hypothetical protein SELMODRAFT_270348 [Sela...   131   9e-29

>ref|XP_001768291.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162680469|gb|EDQ66905.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 614

 Score =  138 bits (348), Expect = 6e-31
 Identities = 84/199 (42%), Positives = 107/199 (53%), Gaps = 7/199 (3%)
 Frame = +3

Query: 3   QSDHFRMFLQPQLEERGYTVIYEGKKNTVYTANGHVIDGCATCYRCNRFREVCHYHVICL 182
           QSDH+  F  P+LE+ GYT +Y+ K   VYT + +VIDGCAT +R +RF  V  Y V   
Sbjct: 313 QSDHYEEFFAPELEKHGYTGVYKKKTGEVYTGSVYVIDGCATFFRRDRFSLVKKYEV--- 369

Query: 183 YTY*TLTLEAAWDLSYLCFFFHF*LVFSEIAQEIIVALQPSERLQLTDKKINPIRLTKDN 362
                                     F++ AQ +  AL P      T KK+   RL KDN
Sbjct: 370 -------------------------EFNKAAQSLSEALVP------TTKKVALSRLLKDN 398

Query: 363 VAVVTILE------FVDSAEFPDKLSYRFCVVNTQVHANEDFKDVKLWQVATLVDGLEKI 524
           VA++ +LE      F DS   P K     CV NT +HAN++ KDVKLWQV TL+ GLEKI
Sbjct: 399 VALIVVLEARDTGGFTDSQGTPGKRGQLLCVANTHIHANQELKDVKLWQVHTLLKGLEKI 458

Query: 525 HC-LRIPVLICGDFNSLPG 578
                IP+L+ GDFNS+PG
Sbjct: 459 AASADIPMLVAGDFNSIPG 477


>ref|XP_001782595.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162665915|gb|EDQ52584.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 614

 Score =  132 bits (332), Expect = 4e-29
 Identities = 83/199 (41%), Positives = 106/199 (53%), Gaps = 7/199 (3%)
 Frame = +3

Query: 3   QSDHFRMFLQPQLEERGYTVIYEGKKNTVYTANGHVIDGCATCYRCNRFREVCHYHVICL 182
           QSDH+  F  P+LE+ GYT +Y+ K   VYT + +VIDGCAT +R +RF  V  Y V   
Sbjct: 313 QSDHYEDFYAPELEKHGYTGVYKKKTGEVYTGSVYVIDGCATFFRRDRFSLVKKYEV--- 369

Query: 183 YTY*TLTLEAAWDLSYLCFFFHF*LVFSEIAQEIIVALQPSERLQLTDKKINPIRLTKDN 362
                                     F++ AQ +  AL PS       KK    RL KDN
Sbjct: 370 -------------------------EFNKAAQSLSEALIPST------KKAALSRLLKDN 398

Query: 363 VAVVTILEFVDSAEFPD------KLSYRFCVVNTQVHANEDFKDVKLWQVATLVDGLEKI 524
           VA++ +LE  D+  F D      K     CV NT +HAN++ KDVKLWQV TL+ GLEKI
Sbjct: 399 VALIVVLEARDTGGFMDPQAVSGKRGQLLCVANTHIHANQELKDVKLWQVHTLLKGLEKI 458

Query: 525 HC-LRIPVLICGDFNSLPG 578
                IP+L+ GDFNS+PG
Sbjct: 459 AASADIPMLVAGDFNSVPG 477


>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
           vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
           product [Vitis vinifera]
          Length = 603

 Score =  131 bits (330), Expect = 7e-29
 Identities = 81/196 (41%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
 Frame = +3

Query: 3   QSDHFRMFLQPQLEERGYTVIYEGKKNTVYTANGHVIDGCATCYRCNRFREVCHYHVICL 182
           QSDHF  F  P+L++ GY  +Y+ K N VYT N H IDGCAT +R +RF  V  Y V   
Sbjct: 306 QSDHFEEFFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVKKYEV--- 362

Query: 183 YTY*TLTLEAAWDLSYLCFFFHF*LVFSEIAQEIIVALQPSERLQLTDKKINPIRLTKDN 362
                                     F++ AQ +  A+ PS +     KK    RL KDN
Sbjct: 363 -------------------------EFNKAAQSLTDAVVPSAQ-----KKTALNRLVKDN 392

Query: 363 VAVVTILEFVDS---AEFPDKLSYRFCVVNTQVHANEDFKDVKLWQVATLVDGLEKIHC- 530
           VA++ +LE   S   A+ P K     CV NT ++ +++ KDVKLWQV TL+ GLEKI   
Sbjct: 393 VALIAVLEAKFSYQGADIPGKRQL-LCVANTHINVHQELKDVKLWQVHTLLKGLEKIAAS 451

Query: 531 LRIPVLICGDFNSLPG 578
             IP+L+CGDFNS+PG
Sbjct: 452 ADIPMLVCGDFNSVPG 467


>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
          Length = 603

 Score =  131 bits (330), Expect = 7e-29
 Identities = 81/196 (41%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
 Frame = +3

Query: 3   QSDHFRMFLQPQLEERGYTVIYEGKKNTVYTANGHVIDGCATCYRCNRFREVCHYHVICL 182
           QSDHF  F  P+L++ GY  +Y+ K N VYT N H IDGCAT +R +RF  V  Y V   
Sbjct: 306 QSDHFEEFFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVKKYEV--- 362

Query: 183 YTY*TLTLEAAWDLSYLCFFFHF*LVFSEIAQEIIVALQPSERLQLTDKKINPIRLTKDN 362
                                     F++ AQ +  A+ PS +     KK    RL KDN
Sbjct: 363 -------------------------EFNKAAQSLTDAVVPSAQ-----KKTALNRLVKDN 392

Query: 363 VAVVTILEFVDS---AEFPDKLSYRFCVVNTQVHANEDFKDVKLWQVATLVDGLEKIHC- 530
           VA++ +LE   S   A+ P K     CV NT ++ +++ KDVKLWQV TL+ GLEKI   
Sbjct: 393 VALIAVLEAKFSYQGADIPGKRQL-LCVANTHINVHQELKDVKLWQVHTLLKGLEKIAAS 451

Query: 531 LRIPVLICGDFNSLPG 578
             IP+L+CGDFNS+PG
Sbjct: 452 ADIPMLVCGDFNSVPG 467


>ref|XP_002963537.1| hypothetical protein SELMODRAFT_270348 [Selaginella moellendorffii]
           gi|302799569|ref|XP_002981543.1| hypothetical protein
           SELMODRAFT_178984 [Selaginella moellendorffii]
           gi|300150709|gb|EFJ17358.1| hypothetical protein
           SELMODRAFT_178984 [Selaginella moellendorffii]
           gi|300168805|gb|EFJ35408.1| hypothetical protein
           SELMODRAFT_270348 [Selaginella moellendorffii]
          Length = 570

 Score =  131 bits (329), Expect = 9e-29
 Identities = 80/194 (41%), Positives = 104/194 (53%), Gaps = 2/194 (1%)
 Frame = +3

Query: 3   QSDHFRMFLQPQLEERGYTVIYEGKKNTVYTANGHVIDGCATCYRCNRFREVCHYHVICL 182
           QSDHF  F  P+LE+ GY+ +Y+ K   VY A  + IDGCAT YR +RF +V  Y V   
Sbjct: 290 QSDHFDEFFAPELEKHGYSAVYKKKTAEVYAAGVYTIDGCATFYRNDRFLQVKKYEV--- 346

Query: 183 YTY*TLTLEAAWDLSYLCFFFHF*LVFSEIAQEIIVALQPSERLQLTDKKINPIRLTKDN 362
                                     F++ AQ    A  PS +     +K    RL KDN
Sbjct: 347 -------------------------EFNKAAQSFSEAYMPSAQ-----RKAALTRLLKDN 376

Query: 363 VAVVTILEFVDSAEFPDKLSYRF-CVVNTQVHANEDFKDVKLWQVATLVDGLEKIHC-LR 536
           VA++ +LE +D   +PD    +  CV NT +HAN + KDVKLWQV TL+ GLEKI     
Sbjct: 377 VALIVVLEVLD---YPDPSKKQLICVANTHIHANPELKDVKLWQVQTLLKGLEKIAASAE 433

Query: 537 IPVLICGDFNSLPG 578
           IP+L+ GDFNS+PG
Sbjct: 434 IPMLVAGDFNSVPG 447