BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011842
         (1797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin...   479   e-133
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...   468   e-129
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...   465   e-128
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici...   462   e-127
gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indi...   459   e-127

>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like [Vitis
            vinifera]
          Length = 372

 Score =  479 bits (1234), Expect = e-133
 Identities = 238/356 (66%), Positives = 259/356 (72%), Gaps = 39/356 (10%)
 Frame = -1

Query: 1488 DNWI---NDQSIWATEDDYNVWNADDRGGT-------------RSGSEPPNKKSRGGDSS 1357
            DNWI   +DQ +WATEDDY VWN D  G T             RSGSEPPNKKSR     
Sbjct: 18   DNWIPGSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQSQSRSGSEPPNKKSRNSQVV 77

Query: 1356 QFGGVDLG-------NRARAIGKMFFKTKLCCKFRNGTCPYITNCNFAHGIEELRKPPPN 1198
               G   G       NR++AIGKMFFKTKLCCKFR GTCPY+TNCNFAH I+ELR+PPPN
Sbjct: 78   DSQGNVFGRDRDLPSNRSKAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHSIQELRRPPPN 137

Query: 1197 WQEIVAAQDDERGVSSEPREEHQIPCLISTGVGTESQRSYKGRHCKKFYTEEGCPYGDNC 1018
            WQEIVAA D+ERGVSSEPREE QIP + S+  G E+QRSYKGRHCKKFYT+EGCPYGDNC
Sbjct: 138  WQEIVAAHDEERGVSSEPREEFQIPSIGSSSFGVETQRSYKGRHCKKFYTDEGCPYGDNC 197

Query: 1017 TFLHDEQSKARESVAISLGPSM----------SNGYGNGVNGQSQKPSNWKTRICNKWEM 868
            TFLHDEQSKARESVAISLGP              G G G +G + KPSNWKTRICNKWE+
Sbjct: 198  TFLHDEQSKARESVAISLGPGAGGGGGGGGGGGGGGGGGGSGSNIKPSNWKTRICNKWEL 257

Query: 867  TGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLKQVGVSLKTPMDTVVV--- 697
            TGYCPFGSKCHFAHG+GELHRYGGGLVD E RD  SAPPD KQ GV  K P D VV    
Sbjct: 258  TGYCPFGSKCHFAHGMGELHRYGGGLVD-ESRDSTSAPPDSKQGGVPSKPPSDAVVAFVT 316

Query: 696  ---STSSAPHADVYHMGVPSQRSSVINQRPGMRPMQKWKGPDKISRIYGDWIDDNE 538
                 +S PH+DVYH GVPSQR + + QRPG R  +KWKGPDKISRIYGDWIDD E
Sbjct: 317  SVPLVASVPHSDVYHAGVPSQRPTSVIQRPGQRTQKKWKGPDKISRIYGDWIDDIE 372


>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
            [Cucumis sativus]
          Length = 350

 Score =  468 bits (1205), Expect = e-129
 Identities = 237/364 (65%), Positives = 267/364 (73%), Gaps = 24/364 (6%)
 Frame = -1

Query: 1557 MDYGEGRFVNGNVVEIIPQAQEPDNWINDQSIWATEDDYNVWNADDRGG----------- 1411
            MDY       GNVV +I      +NW  +  +WATED+Y  WN    G            
Sbjct: 1    MDYS-----GGNVVHVISGTSN-ENWPGE--VWATEDEYRAWNNGGDGSVDTPSNSSYDQ 52

Query: 1410 ----TRSGSEPPNKKSRGGDSSQFGGVDLGNRARAIGKMFFKTKLCCKFRNGTCPYITNC 1243
                +RSGSEPPNKKSR   SSQ   V   NR++AIGKMFFKTKLCCKFR GTCPYITNC
Sbjct: 53   RQSQSRSGSEPPNKKSR---SSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNC 107

Query: 1242 NFAHGIEELRKPPPNWQEIVAAQDDERGVSSEPREEHQIPCLISTGVGTESQRSYKGRHC 1063
            NFAH IEELR+PP NWQEIVAA ++E+ V SEPREE QIP L ++  G+ESQRSYKGRHC
Sbjct: 108  NFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHC 167

Query: 1062 KKFYTEEGCPYGDNCTFLHDEQSKARESVAISLGPSMSNGYGNG---------VNGQSQK 910
            KKFYTEEGCPYGD+CTFLHDEQSK RESVAISLGP   +G G G          NG + K
Sbjct: 168  KKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGSGNGSNTK 227

Query: 909  PSNWKTRICNKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLKQVGV 730
            PSNWKTRICNKWE+TGYCPFG+KCHFAHG  ELHRYGGGL++ E RD ++APPDLKQ GV
Sbjct: 228  PSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQ-GV 286

Query: 729  SLKTPMDTVVVSTSSAPHADVYHMGVPSQRSSVINQRPGMRPMQKWKGPDKISRIYGDWI 550
              K P DT+V S  SAPH+DVYH+ VPSQRS+++ QRPG R  QKWKGPDKISRIYGDWI
Sbjct: 287  LPKAPGDTLVASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWI 346

Query: 549  DDNE 538
            DD E
Sbjct: 347  DDIE 350


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
            [Cucumis sativus]
          Length = 339

 Score =  465 bits (1197), Expect = e-128
 Identities = 234/355 (65%), Positives = 263/355 (74%), Gaps = 15/355 (4%)
 Frame = -1

Query: 1557 MDYGEGRFVNGNVVEIIPQAQEPDNWINDQSIWATEDDYNVWNADDRGG----------- 1411
            MDY       GNVV +I      +NW  +  +WATED+Y  WN    G            
Sbjct: 1    MDYS-----GGNVVHVISGTSN-ENWPGE--VWATEDEYRAWNNGGDGSVDTPSNSSYDQ 52

Query: 1410 ----TRSGSEPPNKKSRGGDSSQFGGVDLGNRARAIGKMFFKTKLCCKFRNGTCPYITNC 1243
                +RSGSEPPNKKSR   SSQ   V   NR++AIGKMFFKTKLCCKFR GTCPYITNC
Sbjct: 53   RQSQSRSGSEPPNKKSR---SSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNC 107

Query: 1242 NFAHGIEELRKPPPNWQEIVAAQDDERGVSSEPREEHQIPCLISTGVGTESQRSYKGRHC 1063
            NFAH IEELR+PP NWQEIVAA ++E+ V SEPREE QIP L ++  G+ESQRSYKGRHC
Sbjct: 108  NFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHC 167

Query: 1062 KKFYTEEGCPYGDNCTFLHDEQSKARESVAISLGPSMSNGYGNGVNGQSQKPSNWKTRIC 883
            KKFYTEEGCPYGD+CTFLHDEQSK RESVAIS G     G G   NG + KPSNWKTRIC
Sbjct: 168  KKFYTEEGCPYGDSCTFLHDEQSKNRESVAISFGG--GGGGGGSGNGSNTKPSNWKTRIC 225

Query: 882  NKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLKQVGVSLKTPMDTV 703
            NKWE+TGYCPFG+KCHFAHG  ELHRYGGGL++ E RD ++APPDLKQ GV  K P DT+
Sbjct: 226  NKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQ-GVLPKAPGDTL 284

Query: 702  VVSTSSAPHADVYHMGVPSQRSSVINQRPGMRPMQKWKGPDKISRIYGDWIDDNE 538
            V S  SAPH+DVYH+ VPSQRS+++ QRPG R  QKWKGPDKISRIYGDWIDD E
Sbjct: 285  VASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 339


>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223532956|gb|EEF34722.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 349

 Score =  462 bits (1188), Expect = e-127
 Identities = 231/364 (63%), Positives = 259/364 (71%), Gaps = 24/364 (6%)
 Frame = -1

Query: 1557 MDYGEGRFVNGNVVEIIPQAQEPDNWINDQS----IWATEDDYNVWNADDRGG------- 1411
            MDY        NVV +IP    PDNW+ + +    +WATEDDY +WN  D          
Sbjct: 1    MDYSRD-----NVVHVIP-GTGPDNWLPNSADSGVVWATEDDYQMWNNSDGPNDNTPSNS 54

Query: 1410 ---TRSGSEPPNKKSRGGDSSQFGGVDLGNRARAIGKMFFKTKLCCKFRNGTCPYITNCN 1240
               +RSGSEPPNKKS+          +L ++ ++IGKMFFKTKLCCKFR GTCPYITNCN
Sbjct: 55   SFQSRSGSEPPNKKSKNNSQ------ELSSK-KSIGKMFFKTKLCCKFRAGTCPYITNCN 107

Query: 1239 FAHGIEELRKPPPNWQEIVAAQDDERGVSSEPREEHQIPCLISTGVGTESQRSYKGRHCK 1060
            FAH IEELR+PPPNWQEIVAA ++ERG   E REE QIP +   G   ESQRSYKGRHCK
Sbjct: 108  FAHSIEELRRPPPNWQEIVAAHEEERGNVMEVREEFQIPSI--GGFSGESQRSYKGRHCK 165

Query: 1059 KFYTEEGCPYGDNCTFLHDEQSKARESVAISLGPSMSNGYGNGVNGQSQ----------K 910
            KFYTEEGCPYGDNCTFLHDEQSK RESVAISLGP    G G G  G             K
Sbjct: 166  KFYTEEGCPYGDNCTFLHDEQSKNRESVAISLGPGGYGGGGGGGAGSGNGSGGGSAGNVK 225

Query: 909  PSNWKTRICNKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLKQVGV 730
            PSNWKTRICNKWE+TGYCPFG+KCHFAHG  ELHRYGGGL++ EG+D +S P D KQ GV
Sbjct: 226  PSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMESEGKDPSSVPADTKQGGV 285

Query: 729  SLKTPMDTVVVSTSSAPHADVYHMGVPSQRSSVINQRPGMRPMQKWKGPDKISRIYGDWI 550
              KTP D VV S +S PH+DVYH+GVPSQR S++ QRPG R  QKWKGPDKISRIYGDWI
Sbjct: 286  LSKTPADIVVASVASVPHSDVYHLGVPSQRPSILMQRPGQRSHQKWKGPDKISRIYGDWI 345

Query: 549  DDNE 538
            DD E
Sbjct: 346  DDIE 349


>gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indica Group]
          Length = 367

 Score =  459 bits (1182), Expect = e-127
 Identities = 234/370 (63%), Positives = 264/370 (71%), Gaps = 41/370 (11%)
 Frame = -1

Query: 1524 NVVEIIPQAQEPDNWIN------DQSIWATEDDYNV-WNADDRGG--TRSGSE--PPNKK 1378
            N + IIP A  PD W N      D  IWATEDDYN  WNAD  GG  +R+GSE  PP KK
Sbjct: 5    NAIHIIPDAAGPDAWANAAAQGGDAGIWATEDDYNSQWNADGGGGGSSRAGSEQPPPGKK 64

Query: 1377 SRGGDSSQFGGVDLGNRARAIGKMFFKTKLCCKFRNGTCPYITNCNFAHGIEELRKPPPN 1198
            SRGG   + GG    +++RAIGKMFFKTKLCCKFR GTCPY+TNCNFAHG+EELRKPPPN
Sbjct: 65   SRGGGGGEGGGNT--SKSRAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHGMEELRKPPPN 122

Query: 1197 WQEIVAAQDDERGVSSEPREEHQIPCLISTGV------------GTESQRSYKGRHCKKF 1054
            WQEIVAA ++    ++E REEHQIP + S+G             G  S R+YKGRHCKKF
Sbjct: 123  WQEIVAAHEE----ATEAREEHQIPIMTSSGPTAGGDAGGGGGGGGGSGRAYKGRHCKKF 178

Query: 1053 YTEEGCPYGDNCTFLHDEQSKARESVAISLGPSMSNGYGNGV----------------NG 922
            YT+EGCPYGD CTFLHDEQSKARESVAISL PS+  G G G                 NG
Sbjct: 179  YTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGGGSYNSAAAAAASASAAAGNG 238

Query: 921  QSQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLK 742
              QKPSNWKTRICNKWEMTGYCPFGSKCHFAHG  ELH+YGGGLVD++ RD A+A PD K
Sbjct: 239  PMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDSRD-AAATPDSK 297

Query: 741  QVGVSLKTPMDTVVVSTSSAPHADVYHMGVPSQRSSVINQRPG--MRPMQKWKGPDKISR 568
            Q  VS K P +T   ST+  PHADVYH+GV +QRS++  QR G   RP+QKWKGPDKISR
Sbjct: 298  QAVVSAKAPAETTAASTTVLPHADVYHLGVQAQRSTIAGQRSGQVQRPIQKWKGPDKISR 357

Query: 567  IYGDWIDDNE 538
            IYGDWID+ E
Sbjct: 358  IYGDWIDETE 367