BLASTX nr result

ID: Coptis21_contig00011839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011839
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611374.1| hypothetical protein MTR_5g013280 [Medicago ...   219   2e-54
ref|XP_002303377.1| predicted protein [Populus trichocarpa] gi|2...   215   2e-53
ref|XP_003574341.1| PREDICTED: uncharacterized protein LOC100824...   199   1e-48
ref|XP_002265335.1| PREDICTED: uncharacterized protein LOC100258...   199   2e-48
ref|XP_002467478.1| hypothetical protein SORBIDRAFT_01g028860 [S...   192   1e-46

>ref|XP_003611374.1| hypothetical protein MTR_5g013280 [Medicago truncatula]
           gi|355512709|gb|AES94332.1| hypothetical protein
           MTR_5g013280 [Medicago truncatula]
          Length = 292

 Score =  219 bits (557), Expect = 2e-54
 Identities = 132/265 (49%), Positives = 159/265 (60%), Gaps = 32/265 (12%)
 Frame = +3

Query: 138 RIENPFALKVGQVFTXXXXXXXXXXXXXRPLNLGAIPVLQQVTSAARGATDAFSGVGRHV 317
           R  NPF LKVGQVFT             RPLNLGAIP+L QV SA RGATDAFSGV RHV
Sbjct: 11  RFSNPFTLKVGQVFTGFGIGCGVGIGVGRPLNLGAIPMLNQVMSATRGATDAFSGVSRHV 70

Query: 318 NSSLRSLGVKNIEAXXXXXXXXXXXXXXXXAIKPGVIHRLQSCFAQAMANLMMKFGV-PG 494
           N+SLR +G KNIE                 A+KPGV++++QSC    M  +M+KFG+ P 
Sbjct: 71  NTSLRKIGAKNIEVGVGCGVGFGHGFGAGLAVKPGVLNQIQSCLVMTMTKMMIKFGITPS 130

Query: 495 L---------------------SIGQ------ELTSQGQPGKLNLDMGSTYKSFASKDTS 593
           L                     S+ Q      +  SQG  G   +++G  +   A KDTS
Sbjct: 131 LPFNLGVLPASLQSATGAVSSGSVTQLAAKSADQLSQGLAGTQPMNIGLAFDKTAVKDTS 190

Query: 594 ----FGSRTEKVISGFLQSPLLKDEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTEE 761
               +GSRTEKV++ FLQ+PLLK EG     E AGRL +EN +LQMVLKHQQ+IE L EE
Sbjct: 191 VDSTYGSRTEKVLNNFLQNPLLKGEGGGP-TESAGRLIAENKILQMVLKHQQMIEELVEE 249

Query: 762 NEKLRQILVEELKVPPSKLLGSTSE 836
           NEKLRQILV+ELKVPPSKL  S+S+
Sbjct: 250 NEKLRQILVKELKVPPSKLEASSSD 274


>ref|XP_002303377.1| predicted protein [Populus trichocarpa] gi|222840809|gb|EEE78356.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  215 bits (547), Expect = 2e-53
 Identities = 137/332 (41%), Positives = 173/332 (52%), Gaps = 84/332 (25%)
 Frame = +3

Query: 132  GFRIENPFALKVGQVFTXXXXXXXXXXXXXRPLNLG------------------------ 239
            G +IENPF  KV QVFT              P+N+G                        
Sbjct: 27   GIKIENPFTFKVLQVFTGFGFGCGIGIGQGMPVNMGTLPVALFSSLKVPFFILAYCMMAF 86

Query: 240  -----------------------AIPVLQQVTSAARGATDAFSGVGRHVNSSLRSLGVKN 350
                                   A+P++ QV SA RGATDAFSG+ RHVN++L  LG KN
Sbjct: 87   FGGLFKPKNVEETHEKSILKTPCALPMVGQVMSATRGATDAFSGITRHVNTALWKLGAKN 146

Query: 351  IEAXXXXXXXXXXXXXXXXAIKPGVIHRLQSCFAQAMANLMMKFGV-PGLSIGQ------ 509
            I+A                A+KPG + ++Q+CF + +  +M K G+ P LSIGQ      
Sbjct: 147  IQAGVGCGVGFGHGFGIGLAVKPGAVQKMQACFLEVLMKMMTKLGIAPNLSIGQGALPMS 206

Query: 510  ----------------------------ELTSQGQPGKLNLDMGSTYKSFASK--DTSFG 599
                                        + TSQ   G  N+   S+ +S  SK  DTSFG
Sbjct: 207  LQSGVSMLTESSIQNPLGNITQLARKLPDQTSQSLYGYGNVSSHSSSESSTSKGSDTSFG 266

Query: 600  SRTEKVISGFLQSPLLKDEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTEENEKLRQ 779
            SRTEKVIS FLQ+P+LK++G TD+NE+AGRLRSENN+LQMVL+HQQ+IE L EEN+KLRQ
Sbjct: 267  SRTEKVISSFLQNPILKEDG-TDINELAGRLRSENNMLQMVLRHQQIIEELMEENQKLRQ 325

Query: 780  ILVEELKVPPSKLLGSTSESKYHSPCLDCFEC 875
            ILVE+LK+PP+KL  S S     SPC DCFEC
Sbjct: 326  ILVEDLKIPPNKLQASHSTIN-KSPCTDCFEC 356


>ref|XP_003574341.1| PREDICTED: uncharacterized protein LOC100824000 [Brachypodium
           distachyon]
          Length = 304

 Score =  199 bits (506), Expect = 1e-48
 Identities = 120/281 (42%), Positives = 158/281 (56%), Gaps = 34/281 (12%)
 Frame = +3

Query: 135 FRIENPFALKVGQVFTXXXXXXXXXXXXXRPLNLGAIPVLQQVTSAARGATDAFSGVGRH 314
           FR+ENPF+LKV QVFT             RP+ LG IP LQQV SA RGATD+FSGV RH
Sbjct: 15  FRMENPFSLKVLQVFTGAGVGCGVGVGVGRPIYLGMIPGLQQVMSATRGATDSFSGVTRH 74

Query: 315 VNSSLRSLGVKNIEAXXXXXXXXXXXXXXXXAIKPGVIHRLQSCFAQAMANLMMKF-GVP 491
           +NS+LR +G+KNIEA                A+KP VIH +QS   + M+ L  K    P
Sbjct: 75  INSALRKVGLKNIEAGIGCGVGIGHGFGIGIALKPRVIHDIQSSVTEVMSKLTSKLKDSP 134

Query: 492 GLSIGQELTS----------QGQPGKLNLDMGSTYKSF---------------------- 575
           G+S    LT+           G P  L ++  +   +F                      
Sbjct: 135 GVSATSNLTAGSLPTNGQTPNGMPMDLEVEAKTVESNFHHTSSNEISQVQPTHGLHGQHG 194

Query: 576 ASKDTSFGSRTEKVISGFLQSPLLKDEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALT 755
              +T  GSRTEKVI+ FLQSPL ++  +TD+ + A  L   +NVLQ++LKHQ+VI+ L 
Sbjct: 195 MQPETITGSRTEKVIANFLQSPLFQNNTKTDIRDAAVNLHGMDNVLQLILKHQRVIDELR 254

Query: 756 EENEKLRQILVEELKVPPSKL-LGSTSESKYHSPCLDCFEC 875
           +ENEKLRQ+L+EELKV P+KL LG  +  K + PC +CF+C
Sbjct: 255 DENEKLRQVLIEELKVSPTKLQLGRENGVKAYYPCSECFDC 295


>ref|XP_002265335.1| PREDICTED: uncharacterized protein LOC100258674 [Vitis vinifera]
          Length = 341

 Score =  199 bits (505), Expect = 2e-48
 Identities = 127/327 (38%), Positives = 161/327 (49%), Gaps = 75/327 (22%)
 Frame = +3

Query: 120 GRNVGFRIENPFALKVGQVFTXXXXXXXXXXXXXRPLNLGAIPVLQQVTSAARGATDAFS 299
           G     RIENPF LKVGQVFT             RP+N+GAIPV+ QV  A RGATDAFS
Sbjct: 9   GNQPRMRIENPFTLKVGQVFTGFGIGCGVGIGVGRPINMGAIPVVNQVMGATRGATDAFS 68

Query: 300 GVGRHVNSSLRSLGVKNIEAXXXXXXXXXXXXXXXXAIKPGVIHRLQSCFAQAMANLMMK 479
           GVGRHVN +LR LG KNIEA                A+KPGV+ ++Q C  Q    +MMK
Sbjct: 69  GVGRHVNDALRKLGAKNIEAGIGCGVGFGHGFGVGLAVKPGVVQKIQYCIVQTTTKMMMK 128

Query: 480 FGV-PGLSIGQE-----------------LTSQGQ------------------------- 530
           FG+ P + IG++                 L+S GQ                         
Sbjct: 129 FGILPNIPIGKDIIPPSLSSTVQGIIPPSLSSTGQGILSPSLQSGMSMTNEPSSQNTTGS 188

Query: 531 ----------------PGKLNLDMGSTYKSFASKD---TSFGSRTEKVISGFLQSPLLKD 653
                            G    + GST  +  SK    TS  S+T KV++  L   L   
Sbjct: 189 VLQLATKLVEQTSYGLAGDATSNTGSTSGASTSKSSQGTSLVSQTGKVVTNILHD-LTST 247

Query: 654 EGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTEENEKLRQILVEELKVPPSKLLGSTS 833
           EG  ++NE+A RLRSENN+L ++L H+Q+I+ L EENEKLRQ+LVE+L +PP KL  S S
Sbjct: 248 EGGNEVNELAERLRSENNMLHVILNHEQIIQELKEENEKLRQVLVEDLNIPPCKLQTSNS 307

Query: 834 -------------ESKYHSPCLDCFEC 875
                         ++  SPC DCF+C
Sbjct: 308 SRYTSPSEDCSSYSNRQRSPCEDCFDC 334


>ref|XP_002467478.1| hypothetical protein SORBIDRAFT_01g028860 [Sorghum bicolor]
           gi|241921332|gb|EER94476.1| hypothetical protein
           SORBIDRAFT_01g028860 [Sorghum bicolor]
          Length = 291

 Score =  192 bits (489), Expect = 1e-46
 Identities = 117/269 (43%), Positives = 153/269 (56%), Gaps = 22/269 (8%)
 Frame = +3

Query: 135 FRIENPFALKVGQVFTXXXXXXXXXXXXXRPLNLGAIPVLQQVTSAARGATDAFSGVGRH 314
           FR+ENPF++KV QVFT             RP+ LG IP LQQV SA RGATD FSGV RH
Sbjct: 14  FRMENPFSVKVLQVFTGFGVGCGVGIGVGRPIYLGMIPGLQQVMSATRGATDTFSGVTRH 73

Query: 315 VNSSLRSLGVKNIEAXXXXXXXXXXXXXXXXAIKPGVIHRLQSCFAQAMANLMMKFG--- 485
           VNS+LR+ G+KNIEA                A+KP V+H +QS   + M+ L  K     
Sbjct: 74  VNSALRTAGLKNIEAGIGCGVGIGHGFGIGIALKPRVLHGIQSSVGEIMSKLTSKLKDTP 133

Query: 486 -VPGLSI--------------GQELTSQGQPGKLNLDMGSTYKSF---ASKDTSFGSRTE 611
            +P  S               G  +  + +  + NL+  S+Y+        +    SRTE
Sbjct: 134 EMPSSSNPMAHSFTSNQQTHNGMSMDLEAKTAESNLNHTSSYEMSRVPTQPEALTASRTE 193

Query: 612 KVISGFLQSPLLKDEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTEENEKLRQILVE 791
           KVI+ FLQSPL +++ + D  +  G L   ++VLQ+VLKHQ+VIE L EENE LRQIL+E
Sbjct: 194 KVIANFLQSPLFQNDTKMDFRDAPGNLHGMDSVLQLVLKHQKVIEELREENENLRQILIE 253

Query: 792 ELKVPPSKL-LGSTSESKYHSPCLDCFEC 875
           ELKV P+KL +G  +  K + PC DCFEC
Sbjct: 254 ELKVSPTKLQIGHKTGVKAYYPCSDCFEC 282


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