BLASTX nr result
ID: Coptis21_contig00011837
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00011837
(2242 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr... 125 6e-26
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 123 9e-26
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2... 123 1e-25
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2... 122 2e-25
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2... 117 1e-23
>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
Length = 814
Score = 125 bits (313), Expect = 6e-26
Identities = 71/221 (32%), Positives = 108/221 (48%), Gaps = 2/221 (0%)
Frame = -3
Query: 704 WNLRGVNDATKAKEVAKFRRMNQLDCIALLETEVKLDKFDEAKKVVCPNCDSMNNYSSDA 525
WN+RG N K KE+ F N+ D L+ET +K DKF++ ++ +NNY S A
Sbjct: 523 WNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLNNYDSAA 582
Query: 524 NGRILVFWNPLTVKVEKEVENS*FLHCKVSMVQLQEPFLVTFIYASNNSVDRLLVWEELK 345
NGRI V WNP + V+ ++ +HC+V + E F +YA N R +W +
Sbjct: 583 NGRIWVSWNPTVLDVKPIASSAQAIHCEVDNLTSSECFNFVAVYAFNTLEQRKELWNFIA 642
Query: 344 SLHASSVGP*CVMGDLNNVLYTHERIGDRPVLPRETSPLADCLNFSELCDHNASGCFFTW 165
A + + GD NNVL +R PV E +DCL + L + G ++TW
Sbjct: 643 HTSAQNSRNLLIGGDFNNVLLVDDRRNGNPVTQHEIQDFSDCLLHNRLSEVRTIGDYYTW 702
Query: 164 SSCGESVGRKWSKINICLINPQW--SFCSSVEFMPPVGATN 48
+ S R +SKI+ + N W F ++V + P G ++
Sbjct: 703 CNNQTSGDRIYSKIDRFIANTSWLQKFTNAVGEVLPKGVSD 743
Score = 79.7 bits (195), Expect = 3e-12
Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Frame = -2
Query: 1914 FNFSCAE-DRSKVLEDGPIFIAGRIFILKPWIVEVEAVRNKVSTVPIWVKLNEVSKELWT 1738
F SC E +R+K + + + I+K W + + + + VP+W++L + W
Sbjct: 311 FEQSCNEIERAKCISKIALDHQIDLVIVKSWAPDFDFQKEILKVVPLWIQLPNLPLTCWG 370
Query: 1737 LDGLSYVASLVGVPMFMDETTTKKKRLSFARVCVEISVSFKFPNMVKLKVQ---GRKVFI 1567
LD LS + S +G P+F DE T+K+ R+S+AR+ VEI V+ P + K+ V+ G+
Sbjct: 371 LDSLSRIGSTLGNPLFADECTSKQSRISYARLLVEIDVT--RPLLYKVMVESPDGKCFEQ 428
Query: 1566 GVEYTWKPISCEKCENFGH 1510
+ Y W+P C+KC+ H
Sbjct: 429 RIVYDWEPSFCKKCQQVDH 447
>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
predicted protein [Populus trichocarpa]
Length = 1386
Score = 123 bits (309), Expect(2) = 9e-26
Identities = 62/152 (40%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Frame = -2
Query: 1941 ITTDKDLFYFNFSCAEDRSKVLEDGPIFIAGRIFILKPWIVEVEAVRNKVSTVPIWVKLN 1762
+++D F FNF + + VLE P +A R +LK W ++ +++ ++ VP+WV+L
Sbjct: 188 LSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLY 247
Query: 1761 EVSKELWTLDGLSYVASLVGVPMFMDETTTKKKRLSFARVCVEISVSFKFPNMVKLKV-Q 1585
V E WT+ GLS VAS VGVP+ D TT +KRLS+ARVCVEI S L+
Sbjct: 248 NVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPN 307
Query: 1584 GRKVFIGVEYTWKPISCEKCENFGHPTVKCSS 1489
G + I EY W P C C FGH T C++
Sbjct: 308 GLFITISAEYEWIPSKCSNCNVFGHTTALCAT 339
Score = 21.9 bits (45), Expect(2) = 9e-26
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 2042 WKDYLVGYFLERKL 2001
WK LVG+F+ +KL
Sbjct: 153 WKSTLVGHFVGQKL 166
Score = 86.3 bits (212), Expect = 3e-14
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 5/233 (2%)
Frame = -3
Query: 713 ISFWNLRGVNDATKAKEVAKFRRMNQLDCIALLETEVKLDKFDEAKKVVCPNCDSMNNYS 534
I WN+RG+ND K E+ + ++ L+ET VK +++ + + NY
Sbjct: 808 IGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKYNVTQLLLRSWSFLYNYD 867
Query: 533 SDANGRILVFWNPLTVKVEKEVENS*FLHCKVSMVQLQEPFLVTFIYASNNSVDRLLVWE 354
GRI V WN TVKV+ + +H V+++ F + IY NN+ R +W
Sbjct: 868 FSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWS 927
Query: 353 ELKSLHAS-SVGP*CVMGDLNNVLYTHERIGDRPVLPRETSPLADCLNFSELCDHNASGC 177
++ S P +MGD N + +R+G L + +++ D SG
Sbjct: 928 DIVSRSDGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTVIREAKVDDLRYSGM 987
Query: 176 FFTWSS-CGESVGRKWSKINICLINPQWSF---CSSVEFMPPVGATNIKMMIK 30
+TWS+ C E++ + K++ L+N +W+ S F+P + + M++K
Sbjct: 988 HYTWSNQCPENLIMR--KLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVK 1038
Score = 81.6 bits (200), Expect = 8e-13
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 5/227 (2%)
Frame = -3
Query: 695 RGVNDATKAKEVAKFRRMNQLDCIALLETEVKLDKFDEAKKVVCPNCDSMNNYSSDANGR 516
RG+ND K E+ + ++ L+ET VK D +++ + + NY GR
Sbjct: 533 RGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVTQLLLRSWSFLYNYDFSCRGR 592
Query: 515 ILVFWNPLTVKVEKEVENS*FLHCKVSMVQLQEPFLVTFIYASNNSVDRLLVWEELKSLH 336
I V WN TVKV+ + +H V+++ F + IY NN+ R +W ++ S
Sbjct: 593 IWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRS 652
Query: 335 AS-SVGP*CVMGDLNNVLYTHERIGDRPVLPRETSPLADCLNFSELCDHNASGCFFTWSS 159
P +MGD N + +R+G L + +++ D SG +TWS+
Sbjct: 653 DGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTVIREAKVDDLRYSGMHYTWSN 712
Query: 158 -CGESVGRKWSKINICLINPQWSF---CSSVEFMPPVGATNIKMMIK 30
C E++ + K++ L+N +W+ S F+P + + M++K
Sbjct: 713 QCPENLIMR--KLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVK 757
>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
predicted protein [Populus trichocarpa]
Length = 1166
Score = 123 bits (308), Expect(2) = 1e-25
Identities = 62/152 (40%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Frame = -2
Query: 1941 ITTDKDLFYFNFSCAEDRSKVLEDGPIFIAGRIFILKPWIVEVEAVRNKVSTVPIWVKLN 1762
+++D F FNF + + VLE P +A R +LK W ++ +++ ++ VP+WV+L
Sbjct: 188 LSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLY 247
Query: 1761 EVSKELWTLDGLSYVASLVGVPMFMDETTTKKKRLSFARVCVEISVSFKFPNMVKLKV-Q 1585
V E WT+ GLS VAS VGVP+ D TT +KRLS+ARVCVEI S L+
Sbjct: 248 NVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPN 307
Query: 1584 GRKVFIGVEYTWKPISCEKCENFGHPTVKCSS 1489
G + I EY W P C C FGH T C++
Sbjct: 308 GLFITISAEYEWIPSKCSNCNVFGHTTALCAT 339
Score = 123 bits (308), Expect(2) = 1e-25
Identities = 62/152 (40%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Frame = -2
Query: 1941 ITTDKDLFYFNFSCAEDRSKVLEDGPIFIAGRIFILKPWIVEVEAVRNKVSTVPIWVKLN 1762
+++D F FNF + + VLE P +A R +LK W ++ +++ ++ VP+WV+L
Sbjct: 981 LSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLY 1040
Query: 1761 EVSKELWTLDGLSYVASLVGVPMFMDETTTKKKRLSFARVCVEISVSFKFPNMVKLKV-Q 1585
V E WT+ GLS VAS VGVP+ D TT +KRLS+ARVCVEI S L+
Sbjct: 1041 NVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPN 1100
Query: 1584 GRKVFIGVEYTWKPISCEKCENFGHPTVKCSS 1489
G + I EY W P C C FGH T C++
Sbjct: 1101 GLFITISAEYEWIPSKCSNCNVFGHTTALCAT 1132
Score = 21.9 bits (45), Expect(2) = 1e-25
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 2042 WKDYLVGYFLERKL 2001
WK LVG+F+ +KL
Sbjct: 153 WKSTLVGHFVGQKL 166
Score = 21.9 bits (45), Expect(2) = 1e-25
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 2042 WKDYLVGYFLERKL 2001
WK LVG+F+ +KL
Sbjct: 946 WKSTLVGHFVGQKL 959
Score = 85.1 bits (209), Expect = 7e-14
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 5/227 (2%)
Frame = -3
Query: 695 RGVNDATKAKEVAKFRRMNQLDCIALLETEVKLDKFDEAKKVVCPNCDSMNNYSSDANGR 516
RG+ND K E+ + ++ L+ET VK D +++ + + NY GR
Sbjct: 533 RGLNDPIKHSELRRLIHQKRIALFGLVETRVKDKNKDNVTQLLLRSWSFLYNYDFSCRGR 592
Query: 515 ILVFWNPLTVKVEKEVENS*FLHCKVSMVQLQEPFLVTFIYASNNSVDRLLVWEELKSLH 336
I V WN TVKV+ + +H V+++ F + IY NN+ R +W ++ S
Sbjct: 593 IWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRS 652
Query: 335 AS-SVGP*CVMGDLNNVLYTHERIGDRPVLPRETSPLADCLNFSELCDHNASGCFFTWSS 159
P +MGD N + +R+G L C+ +++ D SG +TWS+
Sbjct: 653 DGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSN 712
Query: 158 -CGESVGRKWSKINICLINPQWSF---CSSVEFMPPVGATNIKMMIK 30
C E++ K++ L+N +W+ S F+P + + M++K
Sbjct: 713 QCPENL--IMQKLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVK 757
>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
predicted protein [Populus trichocarpa]
Length = 809
Score = 122 bits (306), Expect(2) = 2e-25
Identities = 61/152 (40%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Frame = -2
Query: 1941 ITTDKDLFYFNFSCAEDRSKVLEDGPIFIAGRIFILKPWIVEVEAVRNKVSTVPIWVKLN 1762
+++D F FNF + + VLE P +A R +LK W ++ +++ + VP+WV+L
Sbjct: 188 LSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDFARVPVWVRLY 247
Query: 1761 EVSKELWTLDGLSYVASLVGVPMFMDETTTKKKRLSFARVCVEISVSFKFPNMVKLKV-Q 1585
V E WT+ GLS VAS +GVP+ D TT +KRLS+ARVCVEI S L+
Sbjct: 248 NVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPN 307
Query: 1584 GRKVFIGVEYTWKPISCEKCENFGHPTVKCSS 1489
G + I EY W P C C FGH T C++
Sbjct: 308 GLFITISAEYEWIPSKCSNCNVFGHTTALCAT 339
Score = 21.9 bits (45), Expect(2) = 2e-25
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 2042 WKDYLVGYFLERKL 2001
WK LVG+F+ +KL
Sbjct: 153 WKSTLVGHFVGQKL 166
Score = 86.7 bits (213), Expect = 2e-14
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 5/227 (2%)
Frame = -3
Query: 695 RGVNDATKAKEVAKFRRMNQLDCIALLETEVKLDKFDEAKKVVCPNCDSMNNYSSDANGR 516
RG+ND K E+ + ++ L+ET VK D +++ + + NY GR
Sbjct: 533 RGLNDPIKHSELRRLIHQERIGLFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGR 592
Query: 515 ILVFWNPLTVKVEKEVENS*FLHCKVSMVQLQEPFLVTFIYASNNSVDRLLVWEELKSLH 336
I V WN TVKV+ + +H V+++ F + IY NN+ R +W ++ S
Sbjct: 593 IWVCWNADTVKVDVYGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRS 652
Query: 335 AS-SVGP*CVMGDLNNVLYTHERIGDRPVLPRETSPLADCLNFSELCDHNASGCFFTWSS 159
P +MGD N + +R+G L C+ +++ D SG +TWS+
Sbjct: 653 DGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSN 712
Query: 158 -CGESVGRKWSKINICLINPQWSF---CSSVEFMPPVGATNIKMMIK 30
C E++ + K++ L+N +W+ S F+P + + M++K
Sbjct: 713 QCPENLIMR--KLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVK 757
>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
predicted protein [Populus trichocarpa]
Length = 819
Score = 117 bits (293), Expect = 1e-23
Identities = 59/152 (38%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Frame = -2
Query: 1941 ITTDKDLFYFNFSCAEDRSKVLEDGPIFIAGRIFILKPWIVEVEAVRNKVSTVPIWVKLN 1762
+++D F FNF + + VLE P +A R +LK W ++ +++ ++ VP+WV+L
Sbjct: 41 LSSDNGFFIFNFDSVDHATNVLESAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLY 100
Query: 1761 EVSKELWTLDGLSYVASLVGVPMFMDETTTKKKRLSFARVCVEISVSFKFPNMVKLKV-Q 1585
V E WT+ GLS VAS +GVP+ D TT +KRLS+ RVCVEI S L+
Sbjct: 101 NVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYVRVCVEIDASKTLVKEYDLRCPN 160
Query: 1584 GRKVFIGVEYTWKPISCEKCENFGHPTVKCSS 1489
G + I EY W P C FGH T C++
Sbjct: 161 GLFITISAEYEWIPSKCSNYNVFGHTTPLCAT 192
Score = 81.6 bits (200), Expect = 8e-13
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 5/227 (2%)
Frame = -3
Query: 695 RGVNDATKAKEVAKFRRMNQLDCIALLETEVKLDKFDEAKKVVCPNCDSMNNYSSDANGR 516
RG+ND K E+ + ++ L+ET VK D +++ + + NY GR
Sbjct: 386 RGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGR 445
Query: 515 ILVFWNPLTVKVEKEVENS*FLHCKVSMVQLQEPFLVTFIYASNNSVDRLLVWEELKSLH 336
I V WN TVKV+ + +H V+++ F + IY NN+ R +W ++ S
Sbjct: 446 IWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRS 505
Query: 335 ASSVGP*CVM-GDLNNVLYTHERIGDRPVLPRETSPLADCLNFSELCDHNASGCFFTWSS 159
++ GD N + +R+G L C+ +++ D SG +TWS+
Sbjct: 506 DGWESTLWILIGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSN 565
Query: 158 -CGESVGRKWSKINICLINPQWSF---CSSVEFMPPVGATNIKMMIK 30
C E++ + K++ L+N +W+ S F+P + + M++K
Sbjct: 566 QCPENLIMR--KLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVK 610