BLASTX nr result

ID: Coptis21_contig00011829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011829
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265726.2| PREDICTED: protein SCAI homolog [Vitis vinif...   145   2e-32
emb|CBI38092.3| unnamed protein product [Vitis vinifera]              132   1e-28
ref|XP_002319760.1| predicted protein [Populus trichocarpa] gi|2...   127   4e-27
ref|XP_002524004.1| signal transducer, putative [Ricinus communi...   114   4e-23
ref|XP_002531663.1| signal transducer, putative [Ricinus communi...   108   3e-21

>ref|XP_002265726.2| PREDICTED: protein SCAI homolog [Vitis vinifera]
          Length = 638

 Score =  145 bits (365), Expect = 2e-32
 Identities = 80/146 (54%), Positives = 97/146 (66%), Gaps = 1/146 (0%)
 Frame = +3

Query: 3   KAILYRPAVTHFIAVLATISEELPPDGVLLVYLSAXXXXXXXXXXXXXXXAYTKTTESIV 182
           KAILYRP++THFIAVLATI EELPPDGVLL+YLS                    TTE+IV
Sbjct: 310 KAILYRPSITHFIAVLATICEELPPDGVLLIYLSGSGRGRQTIVPSYGAGTSLDTTENIV 369

Query: 183 GNIQSHEMTSEANXXXXXXXXRHENTTYSYGQTRGN-LRNNSGCLWMGSRGNGGTNCIYP 359
            + QSH + SEAN          ++   S GQ++ + +  +SGCL +GSRGNGG N IYP
Sbjct: 370 RSFQSHNIHSEANSTSPFRSPS-DSPNPSSGQSKEDCISCHSGCLHIGSRGNGGLNFIYP 428

Query: 360 SDLIPFTRRPLFLIVDSDCSEAFKAD 437
            DLIPFTRRPLFL++DSD SEAF A+
Sbjct: 429 CDLIPFTRRPLFLVIDSDSSEAFSAN 454


>emb|CBI38092.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  132 bits (333), Expect = 1e-28
 Identities = 76/144 (52%), Positives = 93/144 (64%), Gaps = 1/144 (0%)
 Frame = +3

Query: 3   KAILYRPAVTHFIAVLATISEELPPDGVLLVYLSAXXXXXXXXXXXXXXXAYTKTTESIV 182
           KAILYRP++THFIAVLATI EELPPDGVLL+YLS                    TTE+IV
Sbjct: 310 KAILYRPSITHFIAVLATICEELPPDGVLLIYLSGSGRGRQTIVPSYGAGTSLDTTENIV 369

Query: 183 GNIQSHEMTSEANXXXXXXXXRHENTTYSYGQTRGN-LRNNSGCLWMGSRGNGGTNCIYP 359
            + QSH + SEAN          ++   S GQ++ + +  +SGCL +GSRGNGG N IYP
Sbjct: 370 RSFQSHNIHSEANSTSPFRSP-SDSPNPSSGQSKEDCISCHSGCLHIGSRGNGGLNFIYP 428

Query: 360 SDLIPFTRRPLFLIVDSDCSEAFK 431
            DLIPFTRRPLFL++D    +AFK
Sbjct: 429 CDLIPFTRRPLFLVID----KAFK 448


>ref|XP_002319760.1| predicted protein [Populus trichocarpa] gi|222858136|gb|EEE95683.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score =  127 bits (319), Expect = 4e-27
 Identities = 70/145 (48%), Positives = 83/145 (57%)
 Frame = +3

Query: 3   KAILYRPAVTHFIAVLATISEELPPDGVLLVYLSAXXXXXXXXXXXXXXXAYTKTTESIV 182
           KA+LYRP+VTHF+AVL TI EEL PDGV+L+YLSA                   TTE+ V
Sbjct: 295 KAVLYRPSVTHFLAVLGTICEELAPDGVILIYLSASGRVGHTISPPSGAGTSINTTENTV 354

Query: 183 GNIQSHEMTSEANXXXXXXXXRHENTTYSYGQTRGNLRNNSGCLWMGSRGNGGTNCIYPS 362
            N QSH M S+                             S CL  G+RGNGG N IYP+
Sbjct: 355 RNFQSHAMQSK-----------------------------SDCLHFGTRGNGGLNSIYPT 385

Query: 363 DLIPFTRRPLFLIVDSDCSEAFKAD 437
           DLIPFTRRPLF+++DSD SEAFKA+
Sbjct: 386 DLIPFTRRPLFIVIDSDSSEAFKAN 410


>ref|XP_002524004.1| signal transducer, putative [Ricinus communis]
           gi|223536731|gb|EEF38372.1| signal transducer, putative
           [Ricinus communis]
          Length = 761

 Score =  114 bits (285), Expect = 4e-23
 Identities = 62/144 (43%), Positives = 85/144 (59%)
 Frame = +3

Query: 3   KAILYRPAVTHFIAVLATISEELPPDGVLLVYLSAXXXXXXXXXXXXXXXAYTKTTESIV 182
           KA+LYRP++TH +AVL  I EELP DGVLL+YLSA               + T T +++V
Sbjct: 311 KAVLYRPSITHLLAVLGMICEELPADGVLLIYLSASGRVGQTISSPVAGTSIT-TADNVV 369

Query: 183 GNIQSHEMTSEANXXXXXXXXRHENTTYSYGQTRGNLRNNSGCLWMGSRGNGGTNCIYPS 362
            N+ S   ++               ++ S      + R    CL+ G+RGNGG N +YP+
Sbjct: 370 RNLYSDTASTSPF------------SSPSNCPNPSSRRCKGDCLYFGARGNGGLNSVYPT 417

Query: 363 DLIPFTRRPLFLIVDSDCSEAFKA 434
           DL+PFTRRPLF+++DSD SEAFKA
Sbjct: 418 DLVPFTRRPLFIVIDSDVSEAFKA 441


>ref|XP_002531663.1| signal transducer, putative [Ricinus communis]
           gi|223528694|gb|EEF30707.1| signal transducer, putative
           [Ricinus communis]
          Length = 542

 Score =  108 bits (269), Expect = 3e-21
 Identities = 60/146 (41%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3   KAILYRPAVTHFIAVLATISEELPPDGVLLVYLSAXXXXXXXXXXXXXXXAYTKTTESIV 182
           KA+LYRP+VTH +AV+ATI EELPP+ ++L+Y+SA               +Y   T+S  
Sbjct: 244 KAVLYRPSVTHLLAVMATICEELPPESIMLIYISASGKAGQ---------SYVSQTDSSG 294

Query: 183 GNIQSHEMTSEANXXXXXXXXRHENTTYSYGQTRGNLRNNS---GCLWMGSRGNGGTNCI 353
           G+ +S +    +           +N++ S   + G   +N      LW+  RG GG+N +
Sbjct: 295 GSRKSSKSKVVSGTSS------EQNSSASEVHSNGKRDSNDYHDNYLWLCPRGTGGSNAL 348

Query: 354 YPSDLIPFTRRPLFLIVDSDCSEAFK 431
           YP D+IPFTRRPLFLI+DSD S AFK
Sbjct: 349 YPGDIIPFTRRPLFLIIDSDSSHAFK 374


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