BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011824
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [V...   111   3e-22
emb|CBI37249.3| unnamed protein product [Vitis vinifera]              111   3e-22
ref|XP_002303090.1| predicted protein [Populus trichocarpa] gi|2...   111   3e-22
ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ri...    99   1e-18
ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatu...    87   4e-15

>ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
          Length = 517

 Score =  111 bits (277), Expect = 3e-22
 Identities = 66/128 (51%), Positives = 83/128 (64%), Gaps = 6/128 (4%)
 Frame = +1

Query: 1   GMGMGMDMGLSRPMMPLPQVLAGSSMPRPAAAAYLGPRLPIPAYHPPTGSSPGVSTIRP- 177
           GMGMGM+MG++RPMMP P VL GS++P  AAAA+LG R P+PA+H P  ++P  S I+  
Sbjct: 390 GMGMGMEMGMNRPMMPFPSVLGGSTLPTTAAAAHLGQRYPMPAFHMPHMAAPDSSRIQAN 449

Query: 178 NLSHPSFNSLGMQSSTNQLQPHNFTDSYQHYLSLYNMQAPQCPPQTHSMPQ-----PSSS 342
           N S P  NSLG QSS NQ +  NF D Y  YL    MQ P  P Q  +M Q     PS+S
Sbjct: 450 NQSDPVLNSLGTQSS-NQPRVPNFADPYLQYLQ--QMQMP--PAQNQAMGQQNTSKPSTS 504

Query: 343 EGLQSLEN 366
           +G ++LEN
Sbjct: 505 KGTENLEN 512


>emb|CBI37249.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  111 bits (277), Expect = 3e-22
 Identities = 66/128 (51%), Positives = 83/128 (64%), Gaps = 6/128 (4%)
 Frame = +1

Query: 1   GMGMGMDMGLSRPMMPLPQVLAGSSMPRPAAAAYLGPRLPIPAYHPPTGSSPGVSTIRP- 177
           GMGMGM+MG++RPMMP P VL GS++P  AAAA+LG R P+PA+H P  ++P  S I+  
Sbjct: 352 GMGMGMEMGMNRPMMPFPSVLGGSTLPTTAAAAHLGQRYPMPAFHMPHMAAPDSSRIQAN 411

Query: 178 NLSHPSFNSLGMQSSTNQLQPHNFTDSYQHYLSLYNMQAPQCPPQTHSMPQ-----PSSS 342
           N S P  NSLG QSS NQ +  NF D Y  YL    MQ P  P Q  +M Q     PS+S
Sbjct: 412 NQSDPVLNSLGTQSS-NQPRVPNFADPYLQYLQ--QMQMP--PAQNQAMGQQNTSKPSTS 466

Query: 343 EGLQSLEN 366
           +G ++LEN
Sbjct: 467 KGTENLEN 474


>ref|XP_002303090.1| predicted protein [Populus trichocarpa] gi|222844816|gb|EEE82363.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  111 bits (277), Expect = 3e-22
 Identities = 59/116 (50%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
 Frame = +1

Query: 1   GMGMGMDMGLSRPMMPLPQVLAGSSMPRPAAAAYLGPRLPIPAYHPPTGSSPGVSTIRP- 177
           GMGMGM+MGLSRPMMP P +LAG+    PAAAA+L PR P+P +H P   +P  S ++P 
Sbjct: 447 GMGMGMEMGLSRPMMPFPNILAGAPSATPAAAAHLVPRFPVPPFHVPPIPAPDPSRVQPT 506

Query: 178 NLSHPSFNSLGMQSSTNQLQPHNFTDSYQHYLSLYNMQAPQCPPQTHSMPQPSSSE 345
           N   P   S G Q + NQ +  NF D YQHYL LY M  P   P+  +M QPS+S+
Sbjct: 507 NQVDPMLGSPG-QQNPNQPRVPNFVDPYQHYLGLYQMHLPGV-PRNQAMAQPSTSK 560


>ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
           gi|223539719|gb|EEF41301.1| Phytochrome-interacting
           factor, putative [Ricinus communis]
          Length = 572

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 57/129 (44%), Positives = 83/129 (64%), Gaps = 7/129 (5%)
 Frame = +1

Query: 1   GMGMGMDMGLSRPMMPLPQVLAGSSMP-RPAAAAYLGPRLPIPAYHPPTGSSPGVSTIR- 174
           G+GMGM+MG+SRPMMP P VL+G+ +P + AAAA+LGPR  +PA+H P   +P  S I+ 
Sbjct: 442 GIGMGMEMGMSRPMMPFPNVLSGAPLPTQAAAAAHLGPRFHMPAFHMPPVPAPDPSRIQA 501

Query: 175 PNLSHPSFNSLGMQSSTNQLQPHNFTDSYQHYLSLYNMQAPQCPPQTHSMPQPSSS---- 342
            + S P  +++  Q + NQ +  NF D YQ YL L  +Q P   P+  +M QPS+S    
Sbjct: 502 ASQSDPMVSAISTQ-NPNQPRLPNFVDPYQQYLGLQQLQIP--VPENQAMAQPSTSKPGA 558

Query: 343 -EGLQSLEN 366
            +G ++L+N
Sbjct: 559 NQGAENLDN 567


>ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
           gi|355500490|gb|AES81693.1| Transcription factor PIF1
           [Medicago truncatula]
          Length = 467

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 52/123 (42%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
 Frame = +1

Query: 1   GMGMGMDMGLSRPMMPLPQVLAGSSMPRPAAAAYLGPRLPIPAYHPPTGSSPGVSTIRP- 177
           GMGMGM+MG++RP+MP P +L+GS++P   AAA LGPR  +P +H P   +PG S ++  
Sbjct: 344 GMGMGMEMGINRPVMPFPNMLSGSALP---AAANLGPRFAMPPFHMPHVPTPGSSRMQAA 400

Query: 178 -NLSHPSFNSLGMQSSTNQLQPHNFTDSYQHYLSLYNMQAPQCPPQTHSMPQPSSSEGLQ 354
             + +    S G   S NQ +  NF+DSYQ YL  + MQ      Q  +M QP+ S  L+
Sbjct: 401 NQVDNNVITSAGTHDS-NQSRTPNFSDSYQQYLGPHQMQFQLM--QNQAMNQPNVSRPLE 457

Query: 355 SLE 363
             E
Sbjct: 458 KPE 460