BLASTX nr result

ID: Coptis21_contig00011816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011816
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35888.3| unnamed protein product [Vitis vinifera]              344   3e-92
ref|XP_002274180.2| PREDICTED: uncharacterized protein LOC100241...   343   5e-92
ref|XP_002322823.1| predicted protein [Populus trichocarpa] gi|2...   304   3e-80
ref|XP_003541465.1| PREDICTED: 4'-phosphopantetheinyl transferas...   299   1e-78
ref|XP_002530330.1| magnesium ion binding protein, putative [Ric...   294   4e-77

>emb|CBI35888.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  344 bits (882), Expect = 3e-92
 Identities = 178/314 (56%), Positives = 223/314 (71%), Gaps = 15/314 (4%)
 Frame = -3

Query: 1143 FMHTSFCTVKXXXXXXXXXSTYLNTIP--LPSKRETHLWYITPDEVKDASLLDQYLNVLS 970
            F+H +  T+K          +    +P  LPS+ ETH WYI PDEVK A+LL+QYL++LS
Sbjct: 4    FLHMASFTMKIHCFQRNFSFSSSALVPVQLPSRMETHFWYILPDEVKSATLLNQYLDILS 63

Query: 969  PCEKENVLRLRGDKLQRSVILAHT-----------NSVVSPSLFKFRKNNFGKPEVDWQC 823
            PCEKENVLR+ GD L++S +LA             NS VSP+  KFRKN +GKPEVDWQ 
Sbjct: 64   PCEKENVLRMHGDNLKKSALLARALVRTTIARYQINSQVSPTSLKFRKNIYGKPEVDWQN 123

Query: 822  DKNWEPLPLHFNLSHTSSLIACGVTVDMPIGIDVEEKQRKTRNNLLSLAQRYFTLDEVDY 643
              +  P PLHFN+SHTSSLIACGVT+D PIGIDVEEKQR T+NN+LS A+RYF+  EV+ 
Sbjct: 124  HYDRNPPPLHFNISHTSSLIACGVTLDSPIGIDVEEKQRTTKNNILSFARRYFSPHEVES 183

Query: 642  LNTISNPEIQRQEFIKLWTLKEAYVKALGRGFSAAPFNTFTIRFRGTSRSSLQKRGYSNS 463
            L+ IS+PEIQR EF+KLWTLKEAYVKALGRGFSAAPF  FTIRFR  ++  L   G SNS
Sbjct: 184  LSIISDPEIQRLEFLKLWTLKEAYVKALGRGFSAAPFKNFTIRFRAATKGHLHLSGNSNS 243

Query: 462  EECEIIVETLAEPKNVTTNWSFALLELASSHYVAICVE--NKRIKGVENDPPLLKVWKTV 289
            +  EIIVE+  +PK +T+NW FALLEL  SHY AIC E  +  ++G  + P  L V KT+
Sbjct: 244  KASEIIVESSDDPKTLTSNWQFALLELTGSHYAAICKEKDDDTVEGKGSVPMKLTVRKTI 303

Query: 288  PFIKDELLSETDSV 247
            PF++D+ +S  D++
Sbjct: 304  PFVEDQCISGKDAL 317


>ref|XP_002274180.2| PREDICTED: uncharacterized protein LOC100241207 [Vitis vinifera]
          Length = 317

 Score =  343 bits (880), Expect = 5e-92
 Identities = 173/287 (60%), Positives = 214/287 (74%), Gaps = 13/287 (4%)
 Frame = -3

Query: 1068 IPLPSKRETHLWYITPDEVKDASLLDQYLNVLSPCEKENVLRLRGDKLQRSVILAHT--- 898
            + LPS+ ETH WYI PDEVK A+LL+QYL++LSPCEKENVLR+ GD L++S +LA     
Sbjct: 25   VQLPSRMETHFWYILPDEVKSATLLNQYLDILSPCEKENVLRMHGDNLKKSALLARALVR 84

Query: 897  --------NSVVSPSLFKFRKNNFGKPEVDWQCDKNWEPLPLHFNLSHTSSLIACGVTVD 742
                    NS VSP+  KFRKN +GKPEVDWQ   +  P PLHFN+SHTSSLIACGVT+D
Sbjct: 85   TTIARYQINSQVSPTSLKFRKNIYGKPEVDWQNHYDRNPPPLHFNISHTSSLIACGVTLD 144

Query: 741  MPIGIDVEEKQRKTRNNLLSLAQRYFTLDEVDYLNTISNPEIQRQEFIKLWTLKEAYVKA 562
             PIGIDVEEKQR T+NN+LS A+RYF+  EV+ L+ IS+PEIQR EF+KLWTLKEAYVKA
Sbjct: 145  SPIGIDVEEKQRTTKNNILSFARRYFSPHEVESLSIISDPEIQRLEFLKLWTLKEAYVKA 204

Query: 561  LGRGFSAAPFNTFTIRFRGTSRSSLQKRGYSNSEECEIIVETLAEPKNVTTNWSFALLEL 382
            LGRGFSAAPF  FTIRFR  ++  L   G SNS+  EIIVE+  +PK +T+NW FALLEL
Sbjct: 205  LGRGFSAAPFKNFTIRFRAATKGHLHLSGNSNSKASEIIVESSDDPKTLTSNWQFALLEL 264

Query: 381  ASSHYVAICVE--NKRIKGVENDPPLLKVWKTVPFIKDELLSETDSV 247
              SHY AIC E  +  ++G  + P  L V KT+PF++D+ +S  D++
Sbjct: 265  TGSHYAAICKEKDDDTVEGKGSVPMKLTVRKTIPFVEDQCISGKDAL 311


>ref|XP_002322823.1| predicted protein [Populus trichocarpa] gi|222867453|gb|EEF04584.1|
            predicted protein [Populus trichocarpa]
          Length = 274

 Score =  304 bits (779), Expect = 3e-80
 Identities = 157/284 (55%), Positives = 199/284 (70%), Gaps = 16/284 (5%)
 Frame = -3

Query: 1050 RETHLWYITPDEVKDASLLDQYLNVLSPCEKENVLRLRGDKLQRSVILAHT--------- 898
            RETH+W++ PDE K  SLL+QY+ +LSPCEKENVL +RGD+LQ+  +LA T         
Sbjct: 1    RETHVWFVLPDEFKSVSLLNQYMELLSPCEKENVLSMRGDQLQKRALLARTLVRTTIARY 60

Query: 897  ---NSVVSPSLFKFRKNNFGKPEVDWQCDKNWEPLPLHFNLSHTSSLIACGVTVDMPIGI 727
               N VV P   KF+KN  GKPE+ W+ D    P PLHFN+SHTSSLIACGVTV+ PIGI
Sbjct: 61   QINNHVVDPRSLKFKKNIHGKPELVWESDDGQCPSPLHFNISHTSSLIACGVTVNSPIGI 120

Query: 726  DVEEKQRKTRNNLLSLAQRYFTLDEVDYLNTISNPEIQRQEFIKLWTLKEAYVKALGRGF 547
            DVEEKQRK +NN+L+ A+RYF+L EV++L+ IS+ E+QRQEF+KLW LKEAYVKALGRGF
Sbjct: 121  DVEEKQRKIKNNILAFARRYFSLYEVEHLSAISDSEVQRQEFVKLWILKEAYVKALGRGF 180

Query: 546  SAAPFNTFTIRFRGTSRSSLQKRGYSNSEEC---EIIVETLAEPKNVTTNWSFALLELAS 376
            SAAPF TFTIR          ++  +NS  C    I+VE+   P ++T NW F L ELAS
Sbjct: 181  SAAPFKTFTIR----------EKDATNSGVCPISSIVVESSDHPVSLTNNWQFGLFELAS 230

Query: 375  SHYVAICVENKRIKGVENDPPL-LKVWKTVPFIKDELLSETDSV 247
            SHY A+C+E  +   V    P+ L V KT+PF++D  +S TD+V
Sbjct: 231  SHYAAVCMEKDKTSDVAMRVPMRLTVRKTIPFVEDICISGTDAV 274


>ref|XP_003541465.1| PREDICTED: 4'-phosphopantetheinyl transferase-like [Glycine max]
          Length = 324

 Score =  299 bits (765), Expect = 1e-78
 Identities = 150/297 (50%), Positives = 200/297 (67%), Gaps = 19/297 (6%)
 Frame = -3

Query: 1083 TYLNTIPLPSKRETHLWYITPDEVKDASLLDQYLNVLSPCEKENVLRLRGDKLQRSVILA 904
            +YL  + LP++RE H WYI PDEVK  +LL++YL +LSPCEKEN+ R+RG++L++  +LA
Sbjct: 16   SYLPPVQLPTQREVHFWYILPDEVKSTTLLNRYLEILSPCEKENIFRMRGEQLRKGALLA 75

Query: 903  H-----------TNSVVSPSLFKFRKNNFGKPEVDWQCDKNWEPLPLHFNLSHTSSLIAC 757
                        TN  + P   KF KNN+GKPE+DWQ   +W    LHFN+SHTSSLIAC
Sbjct: 76   RALVRTTLARYQTNFQIDPKSLKFMKNNYGKPELDWQYADDWSLPHLHFNISHTSSLIAC 135

Query: 756  GVTVDMPIGIDVEEKQRKTRNNLLSLAQRYFTLDEVDYLNTISNPEIQRQEFIKLWTLKE 577
            GVTV  PIGIDVEEKQR+ +N++L+ AQR+F+  E++ L  I++PE++ QEFIKLWTLKE
Sbjct: 136  GVTVGSPIGIDVEEKQRRLKNDILAFAQRFFSPHEIEMLTHIADPELRLQEFIKLWTLKE 195

Query: 576  AYVKALGRGFSAAPFNTFTIRFRGTS-RSSLQKRGYSNSEECE------IIVETLAEPKN 418
            +YVKA+GRGFSA+PF TFTIR R    +  +       S+ C        +VE   + KN
Sbjct: 196  SYVKAIGRGFSASPFKTFTIRLRDHHVKGDIHAPPLITSKVCSCKAPDITVVEASDDVKN 255

Query: 417  VTTNWSFALLELASSHYVAICVENKRIK-GVENDPPLLKVWKTVPFIKDELLSETDS 250
             + NW F LLELA SHY AIC+E   +  G    P  L + KT+P+++DE +S TDS
Sbjct: 256  PSNNWQFVLLELAGSHYAAICIEQNSVNTGNGRIPINLTLRKTIPYVEDECISATDS 312


>ref|XP_002530330.1| magnesium ion binding protein, putative [Ricinus communis]
            gi|223530134|gb|EEF32046.1| magnesium ion binding
            protein, putative [Ricinus communis]
          Length = 315

 Score =  294 bits (752), Expect = 4e-77
 Identities = 155/282 (54%), Positives = 194/282 (68%), Gaps = 13/282 (4%)
 Frame = -3

Query: 1062 LPSKRETHLWYITPDEVKDASLLDQYLNVLSPCEKENVLRLRGDKLQRSVILAHT----- 898
            LPS  ETH WYI PDEVK  SLL++Y+ +LSP EK+NVL +  D+L++  ILA T     
Sbjct: 21   LPSPMETHFWYIIPDEVKSISLLNKYMEILSPVEKQNVLCMPDDQLRKRAILARTLVRTT 80

Query: 897  ------NSVVSPSLFKFRKNNFGKPEVDWQCDKNWEPLPLHFNLSHTSSLIACGVTVDMP 736
                  N    P   KFRKN  GKPEV+ Q +    P PLHFN+SHTSSLIACGVTV+  
Sbjct: 81   IARYQKNCHFDPRSLKFRKNIHGKPEVERQSEDGLFPPPLHFNISHTSSLIACGVTVNSQ 140

Query: 735  IGIDVEEKQRKTRNNLLSLAQRYFTLDEVDYLNTISNPEIQRQEFIKLWTLKEAYVKALG 556
            IGIDVEEKQRK +NN+L+ A+RYF+  EV++L+ IS+ E+QRQEFI+LWTLKEAYVKALG
Sbjct: 141  IGIDVEEKQRKIKNNVLAFARRYFSFYEVEFLSAISDSEVQRQEFIRLWTLKEAYVKALG 200

Query: 555  RGFSAAPFNTFTIRFR-GTSRSSLQKRGYSNSEECEIIVETLAEPKNVTTNWSFALLELA 379
            +GFSAAPF TFTIR +  T    +      + E  EIIVE+  + KN+T+NW  ALLELA
Sbjct: 201  KGFSAAPFKTFTIRVKPATKEGHIVLAEDLDCEASEIIVESFDDHKNLTSNWQLALLELA 260

Query: 378  SSHYVAICVENKRIKGVENDPPL-LKVWKTVPFIKDELLSET 256
             SHY AIC+E  +        P+ L  W+TVPF++DE +S T
Sbjct: 261  GSHYAAICMEKDKTNEDGTKVPIKLTAWRTVPFVEDECVSGT 302


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