BLASTX nr result

ID: Coptis21_contig00011815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011815
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274180.2| PREDICTED: uncharacterized protein LOC100241...   112   5e-23
emb|CBI35888.3| unnamed protein product [Vitis vinifera]              112   5e-23
ref|XP_002530330.1| magnesium ion binding protein, putative [Ric...    97   2e-18
ref|XP_004140880.1| PREDICTED: 4'-phosphopantetheinyl transferas...    96   5e-18
ref|XP_003630430.1| 4'-phosphopantetheinyl transferase [Medicago...    93   2e-17

>ref|XP_002274180.2| PREDICTED: uncharacterized protein LOC100241207 [Vitis vinifera]
          Length = 317

 Score =  112 bits (279), Expect = 5e-23
 Identities = 56/108 (51%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
 Frame = -3

Query: 556 ALGRGFSAAPFNTFTIRFRGTSRSSLQKCGHSNSEECEIIVETLAEPKNVTTNWRFALLE 377
           ALGRGFSAAPF  FTIRFR  ++  L   G+SNS+  EIIVE+  +PK +T+NW+FALLE
Sbjct: 204 ALGRGFSAAPFKNFTIRFRAATKGHLHLSGNSNSKASEIIVESSDDPKTLTSNWQFALLE 263

Query: 376 LASSHYVAICVE--NKRIKGVENDPPLLKVWKTVPFIKDELLSETDSV 239
           L  SHY AIC E  +  ++G  + P  L V KT+PF++D+ +S  D++
Sbjct: 264 LTGSHYAAICKEKDDDTVEGKGSVPMKLTVRKTIPFVEDQCISGKDAL 311


>emb|CBI35888.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  112 bits (279), Expect = 5e-23
 Identities = 56/108 (51%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
 Frame = -3

Query: 556 ALGRGFSAAPFNTFTIRFRGTSRSSLQKCGHSNSEECEIIVETLAEPKNVTTNWRFALLE 377
           ALGRGFSAAPF  FTIRFR  ++  L   G+SNS+  EIIVE+  +PK +T+NW+FALLE
Sbjct: 210 ALGRGFSAAPFKNFTIRFRAATKGHLHLSGNSNSKASEIIVESSDDPKTLTSNWQFALLE 269

Query: 376 LASSHYVAICVE--NKRIKGVENDPPLLKVWKTVPFIKDELLSETDSV 239
           L  SHY AIC E  +  ++G  + P  L V KT+PF++D+ +S  D++
Sbjct: 270 LTGSHYAAICKEKDDDTVEGKGSVPMKLTVRKTIPFVEDQCISGKDAL 317


>ref|XP_002530330.1| magnesium ion binding protein, putative [Ricinus communis]
           gi|223530134|gb|EEF32046.1| magnesium ion binding
           protein, putative [Ricinus communis]
          Length = 315

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/115 (45%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
 Frame = -3

Query: 556 ALGRGFSAAPFNTFTIRFR-GTSRSSLQKCGHSNSEECEIIVETLAEPKNVTTNWRFALL 380
           ALG+GFSAAPF TFTIR +  T    +      + E  EIIVE+  + KN+T+NW+ ALL
Sbjct: 198 ALGKGFSAAPFKTFTIRVKPATKEGHIVLAEDLDCEASEIIVESFDDHKNLTSNWQLALL 257

Query: 379 ELASSHYVAICVENKRIKGVENDPPL-LKVWKTVPFIKDELLSETDSVRTVSSFV 218
           ELA SHY AIC+E  +        P+ L  W+TVPF++DE +S T  V  +   +
Sbjct: 258 ELAGSHYAAICMEKDKTNEDGTKVPIKLTAWRTVPFVEDECVSGTRLVVPIRGLI 312


>ref|XP_004140880.1| PREDICTED: 4'-phosphopantetheinyl transferase sfp-like [Cucumis
           sativus]
          Length = 331

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 47/112 (41%), Positives = 71/112 (63%)
 Frame = -3

Query: 556 ALGRGFSAAPFNTFTIRFRGTSRSSLQKCGHSNSEECEIIVETLAEPKNVTTNWRFALLE 377
           ALGRGFSA PFNTFTI+F  T+R S      ++ E  EI VE+  + +N + +  FAL+E
Sbjct: 210 ALGRGFSATPFNTFTIQFNKTARGSCLPGCKTSEEAYEISVESCDDLENCSRSMTFALME 269

Query: 376 LASSHYVAICVENKRIKGVENDPPLLKVWKTVPFIKDELLSETDSVRTVSSF 221
           L+ SHY A+C+E        + P  L VW+T+P+++DE +S T++   ++ F
Sbjct: 270 LSGSHYAAVCMEKDTSFRAGSLPMKLNVWRTIPYVEDECVSGTEAALPINGF 321


>ref|XP_003630430.1| 4'-phosphopantetheinyl transferase [Medicago truncatula]
           gi|355524452|gb|AET04906.1| 4'-phosphopantetheinyl
           transferase [Medicago truncatula]
          Length = 416

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
 Frame = -3

Query: 556 ALGRGFSAAPFNTFTIRFRG-TSRSSLQKCGHSNSEECEIIVETLAEPKNVTTNWRFALL 380
           ALGRGFSA+PFNTFTIR R    +  +       S+E EI VE   + KN+++NW F LL
Sbjct: 297 ALGRGFSASPFNTFTIRLRDHVVKGGIHVPPDVISKEAEITVEPSGDLKNLSSNWHFVLL 356

Query: 379 ELASSHYVAICVENKRIKGVENDPPL-LKVWKTVPFIKDELLSETDSVRTV 230
           EL  SHY AIC+E       +   P+ L + KT+PF++D  +S TDS   +
Sbjct: 357 ELIGSHYAAICIEKDNTNADKGSIPVNLIIRKTIPFVEDGCISGTDSAEVI 407


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