BLASTX nr result

ID: Coptis21_contig00011783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011783
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516759.1| serine/threonine kinase, putative [Ricinus c...    58   1e-06

>ref|XP_002516759.1| serine/threonine kinase, putative [Ricinus communis]
           gi|223544132|gb|EEF45657.1| serine/threonine kinase,
           putative [Ricinus communis]
          Length = 638

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 54/178 (30%), Positives = 72/178 (40%), Gaps = 18/178 (10%)
 Frame = +1

Query: 40  YTSDASILTLSSNYTPGTHLNCTSPIPSNGLQGLQNASCLGCNGQDG----SNLCYYAPW 207
           YTSD  I+TL        +  C    P   LQ   N     CN  +G     NL      
Sbjct: 123 YTSDIQIITL--------YYGCPQSNPMPTLQDFTNQ--FSCNDSNGFFVTRNLSNLTAA 172

Query: 208 LVTY-PNCETYHMYTLGGPFNASSVR---------NLRAYLQSGFQLMYGKPQNCRGCEA 357
           L+TY   C+   +     P N S+V+         NL   L+ GF L + +   C  C  
Sbjct: 173 LMTYFRTCDVEVIV----PANQSAVQSLENRPNQENLVIALEQGFGLEWRENSTCETCNM 228

Query: 358 SGGRCGTNPWSSSASFVCFCLAGVHRFNC----SDGLNPNSIENTLSKGRWVPFNRNV 519
           SGG+CG+N    S  F C+C  G   F+C    S GL   +   T+  G +  F R V
Sbjct: 229 SGGQCGSNSTDPSL-FACYCTNGPDPFSCGRSQSSGLGAAAAVLTICLGIYYCFTRRV 285


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